EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015018567 (Gene tree)
Gene ID: -
Gene Symbol: zgc:77262
Alias: -
Full Name: zgc:77262
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 1946 bases
Position: chrKV411287.1:886570-888515
Accession: ZDB-GENE-040426-1811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015028907	RRM_5	PF13893.6	4e-08	1	2
ENSSFOP00015028907	RRM_5	PF13893.6	4e-08	2	2
ENSSFOP00015028907	RRM_1	PF00076.22	5.4e-36	1	2
ENSSFOP00015028907	RRM_1	PF00076.22	5.4e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015029235	-	456	-	ENSSFOP00015028907	151 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015018567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015018567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015018567	zgc:77262	86	32.836	ENSSFOG00015005350	MSI1	50	32.836
ENSSFOG00015018567	zgc:77262	89	32.099	ENSSFOG00015019668	-	66	32.099
ENSSFOG00015018567	zgc:77262	86	30.380	ENSSFOG00015021687	-	56	30.380

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015018567	zgc:77262	89	53.731	ENSAPOG00000012375	-	95	53.731	Acanthochromis_polyacanthus
ENSSFOG00015018567	zgc:77262	89	53.731	ENSACIG00000016472	-	84	53.731	Amphilophus_citrinellus
ENSSFOG00015018567	zgc:77262	89	53.731	ENSAOCG00000010907	-	97	53.731	Amphiprion_ocellaris
ENSSFOG00015018567	zgc:77262	89	53.731	ENSAPEG00000009476	-	96	53.731	Amphiprion_percula
ENSSFOG00015018567	zgc:77262	89	53.731	ENSATEG00000001912	-	88	53.731	Anabas_testudineus
ENSSFOG00015018567	zgc:77262	89	50.000	ENSAMXG00000032121	rbm4.2	87	50.000	Astyanax_mexicanus
ENSSFOG00015018567	zgc:77262	91	65.909	ENSCPBG00000023666	-	89	65.909	Chrysemys_picta_bellii
ENSSFOG00015018567	zgc:77262	89	48.333	ENSCSEG00000007739	-	99	48.333	Cynoglossus_semilaevis
ENSSFOG00015018567	zgc:77262	89	51.667	ENSDARG00000036386	rbm4.1	79	51.667	Danio_rerio
ENSSFOG00015018567	zgc:77262	88	47.445	ENSEBUG00000007174	-	88	47.445	Eptatretus_burgeri
ENSSFOG00015018567	zgc:77262	89	53.731	ENSFHEG00000003483	-	100	53.731	Fundulus_heteroclitus
ENSSFOG00015018567	zgc:77262	89	52.239	ENSGMOG00000007455	-	59	52.239	Gadus_morhua
ENSSFOG00015018567	zgc:77262	89	54.478	ENSGAFG00000019301	-	91	54.478	Gambusia_affinis
ENSSFOG00015018567	zgc:77262	91	65.152	ENSGAGG00000014558	-	89	65.152	Gopherus_agassizii
ENSSFOG00015018567	zgc:77262	99	49.333	ENSHBUG00000011624	-	96	49.333	Haplochromis_burtoni
ENSSFOG00015018567	zgc:77262	89	51.493	ENSHCOG00000011413	-	81	51.493	Hippocampus_comes
ENSSFOG00015018567	zgc:77262	89	52.985	ENSLBEG00000019756	-	83	52.985	Labrus_bergylta
ENSSFOG00015018567	zgc:77262	89	71.642	ENSLACG00000006343	zgc:77262	50	71.642	Latimeria_chalumnae
ENSSFOG00015018567	zgc:77262	97	49.660	ENSLOCG00000002772	rbm4.1	99	49.660	Lepisosteus_oculatus
ENSSFOG00015018567	zgc:77262	95	47.297	ENSMZEG00005009210	-	82	47.297	Maylandia_zebra
ENSSFOG00015018567	zgc:77262	89	38.060	ENSMZEG00005028161	-	73	38.060	Maylandia_zebra
ENSSFOG00015018567	zgc:77262	89	52.239	ENSMZEG00005028160	-	91	52.239	Maylandia_zebra
ENSSFOG00015018567	zgc:77262	89	52.985	ENSMMOG00000020484	-	84	52.985	Mola_mola
ENSSFOG00015018567	zgc:77262	99	49.333	ENSNBRG00000017763	-	95	49.333	Neolamprologus_brichardi
ENSSFOG00015018567	zgc:77262	95	52.448	ENSPKIG00000020805	rbm4.1	87	52.448	Paramormyrops_kingsleyae
ENSSFOG00015018567	zgc:77262	89	50.746	ENSPMGG00000004331	rbm4.1	92	50.746	Periophthalmus_magnuspinnatus
ENSSFOG00015018567	zgc:77262	87	45.570	ENSPMAG00000003433	rbm4.2	73	45.570	Petromyzon_marinus
ENSSFOG00015018567	zgc:77262	89	54.386	ENSPLAG00000018569	-	85	54.386	Poecilia_latipinna
ENSSFOG00015018567	zgc:77262	89	54.386	ENSPMEG00000006278	-	85	54.386	Poecilia_mexicana
ENSSFOG00015018567	zgc:77262	99	49.333	ENSPNYG00000004649	-	95	49.333	Pundamilia_nyererei
ENSSFOG00015018567	zgc:77262	89	54.478	ENSSMAG00000007575	-	92	54.478	Scophthalmus_maximus
ENSSFOG00015018567	zgc:77262	89	52.985	ENSXCOG00000003730	-	94	52.985	Xiphophorus_couchianus
ENSSFOG00015018567	zgc:77262	89	52.985	ENSXMAG00000008059	-	52	52.985	Xiphophorus_maculatus