EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015018778 (Gene tree)
Gene ID: 108935963
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 12290 bases
Position: chrKV410795.1:5936452-5948741
Accession: 108935963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015029261	CPL	PF08144.11	3.6e-48	1	1
ENSSFOP00015029289	CPL	PF08144.11	3.6e-48	1	1
ENSSFOP00015029328	CPL	PF08144.11	1.4e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015029596	-	4356	-	ENSSFOP00015029261	642 (aa)	-	A0A0P7YM18
ENSSFOT00015029624	-	4032	XM_018754972	ENSSFOP00015029289	642 (aa)	XP_018610488	A0A0P7YM18
ENSSFOT00015029664	-	1770	-	ENSSFOP00015029328	589 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015018778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015018778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015018778	pum3	99	61.031	ENSG00000080608	PUM3	95	65.161	Homo_sapiens
ENSSFOG00015018778	pum3	99	62.058	ENSAPOG00000020252	pum3	99	62.058	Acanthochromis_polyacanthus
ENSSFOG00015018778	pum3	96	62.833	ENSAMEG00000012187	PUM3	99	63.775	Ailuropoda_melanoleuca
ENSSFOG00015018778	pum3	86	62.837	ENSACIG00000009786	pum3	92	62.837	Amphilophus_citrinellus
ENSSFOG00015018778	pum3	99	61.017	ENSAOCG00000004439	pum3	99	62.212	Amphiprion_ocellaris
ENSSFOG00015018778	pum3	99	61.017	ENSAPEG00000020523	pum3	99	62.212	Amphiprion_percula
ENSSFOG00015018778	pum3	98	61.290	ENSATEG00000005799	pum3	99	63.313	Anabas_testudineus
ENSSFOG00015018778	pum3	94	65.105	ENSAPLG00000002920	PUM3	99	65.105	Anas_platyrhynchos
ENSSFOG00015018778	pum3	90	63.543	ENSACAG00000003174	PUM3	98	63.543	Anolis_carolinensis
ENSSFOG00015018778	pum3	99	62.171	ENSANAG00000024520	PUM3	92	66.227	Aotus_nancymaae
ENSSFOG00015018778	pum3	99	60.429	ENSACLG00000001017	pum3	99	60.429	Astatotilapia_calliptera
ENSSFOG00015018778	pum3	99	74.299	ENSAMXG00000020911	pum3	100	74.299	Astyanax_mexicanus
ENSSFOG00015018778	pum3	96	62.791	ENSBTAG00000013357	PUM3	99	64.396	Bos_taurus
ENSSFOG00015018778	pum3	79	30.962	WBGene00014165	puf-12	66	31.008	Caenorhabditis_elegans
ENSSFOG00015018778	pum3	98	63.482	ENSCJAG00000010917	PUM3	99	63.482	Callithrix_jacchus
ENSSFOG00015018778	pum3	96	62.667	ENSCAFG00000002035	PUM3	99	64.596	Canis_familiaris
ENSSFOG00015018778	pum3	96	62.667	ENSCAFG00020026867	PUM3	99	64.596	Canis_lupus_dingo
ENSSFOG00015018778	pum3	96	63.289	ENSCHIG00000021559	PUM3	99	65.015	Capra_hircus
ENSSFOG00015018778	pum3	96	61.167	ENSTSYG00000007481	PUM3	92	65.609	Carlito_syrichta
ENSSFOG00015018778	pum3	99	61.653	ENSCAPG00000010592	-	99	61.978	Cavia_aperea
ENSSFOG00015018778	pum3	99	61.412	ENSCPOG00000008552	-	92	65.196	Cavia_porcellus
ENSSFOG00015018778	pum3	98	64.263	ENSCCAG00000032650	PUM3	94	64.263	Cebus_capucinus
ENSSFOG00015018778	pum3	88	69.912	ENSCATG00000024880	PUM3	87	69.912	Cercocebus_atys
ENSSFOG00015018778	pum3	98	64.253	ENSCLAG00000011892	PUM3	99	64.253	Chinchilla_lanigera
ENSSFOG00015018778	pum3	88	69.735	ENSCSAG00000008691	PUM3	87	69.735	Chlorocebus_sabaeus
ENSSFOG00015018778	pum3	78	55.200	ENSCHOG00000002535	PUM3	74	55.200	Choloepus_hoffmanni
ENSSFOG00015018778	pum3	99	63.411	ENSCPBG00000025470	PUM3	95	63.411	Chrysemys_picta_bellii
ENSSFOG00015018778	pum3	81	40.775	ENSCING00000024199	-	96	40.775	Ciona_intestinalis
ENSSFOG00015018778	pum3	93	35.511	ENSCSAVG00000006072	-	99	39.885	Ciona_savignyi
ENSSFOG00015018778	pum3	98	63.945	ENSCANG00000006142	PUM3	87	69.912	Colobus_angolensis_palliatus
ENSSFOG00015018778	pum3	95	66.283	ENSCGRG00001016402	Pum3	92	66.283	Cricetulus_griseus_chok1gshd
ENSSFOG00015018778	pum3	95	66.283	ENSCGRG00000010207	Pum3	92	66.283	Cricetulus_griseus_crigri
ENSSFOG00015018778	pum3	86	62.382	ENSCSEG00000001565	pum3	97	61.962	Cynoglossus_semilaevis
ENSSFOG00015018778	pum3	70	58.582	ENSCVAG00000006550	pum3	99	58.582	Cyprinodon_variegatus
ENSSFOG00015018778	pum3	99	72.855	ENSDARG00000087779	pum3	100	72.855	Danio_rerio
ENSSFOG00015018778	pum3	98	54.799	ENSDNOG00000008157	PUM3	70	54.799	Dasypus_novemcinctus
ENSSFOG00015018778	pum3	82	67.490	ENSETEG00000015331	PUM3	84	68.073	Echinops_telfairi
ENSSFOG00015018778	pum3	81	41.021	ENSEBUG00000011586	pum3	78	41.021	Eptatretus_burgeri
ENSSFOG00015018778	pum3	99	64.286	ENSEASG00005010350	PUM3	99	64.241	Equus_asinus_asinus
ENSSFOG00015018778	pum3	99	62.726	ENSECAG00000017193	PUM3	99	64.551	Equus_caballus
ENSSFOG00015018778	pum3	91	58.092	ENSEEUG00000010314	PUM3	99	57.475	Erinaceus_europaeus
ENSSFOG00015018778	pum3	97	73.693	ENSELUG00000002215	pum3	98	73.693	Esox_lucius
ENSSFOG00015018778	pum3	99	63.509	ENSFALG00000010509	PUM3	99	63.509	Ficedula_albicollis
ENSSFOG00015018778	pum3	98	62.404	ENSFDAG00000021027	PUM3	92	65.033	Fukomys_damarensis
ENSSFOG00015018778	pum3	82	67.978	ENSFHEG00000015576	pum3	98	67.978	Fundulus_heteroclitus
ENSSFOG00015018778	pum3	83	65.047	ENSGMOG00000014217	pum3	99	65.047	Gadus_morhua
ENSSFOG00015018778	pum3	99	62.946	ENSGALG00000010178	PUM3	99	63.158	Gallus_gallus
ENSSFOG00015018778	pum3	55	65.374	ENSGAFG00000001930	pum3	62	65.374	Gambusia_affinis
ENSSFOG00015018778	pum3	83	69.549	ENSGACG00000017878	pum3	97	69.549	Gasterosteus_aculeatus
ENSSFOG00015018778	pum3	96	64.821	ENSGAGG00000018983	PUM3	97	64.715	Gopherus_agassizii
ENSSFOG00015018778	pum3	88	69.735	ENSGGOG00000006143	PUM3	87	69.735	Gorilla_gorilla
ENSSFOG00015018778	pum3	93	55.674	ENSHBUG00000012903	pum3	97	54.286	Haplochromis_burtoni
ENSSFOG00015018778	pum3	95	64.437	ENSHGLG00000015868	-	93	65.253	Heterocephalus_glaber_female
ENSSFOG00015018778	pum3	95	64.437	ENSHGLG00100018825	PUM3	93	65.253	Heterocephalus_glaber_male
ENSSFOG00015018778	pum3	95	59.938	ENSHCOG00000010306	pum3	99	60.386	Hippocampus_comes
ENSSFOG00015018778	pum3	94	74.917	ENSIPUG00000024801	pum3	100	72.628	Ictalurus_punctatus
ENSSFOG00015018778	pum3	95	64.967	ENSSTOG00000009586	PUM3	92	65.686	Ictidomys_tridecemlineatus
ENSSFOG00015018778	pum3	98	63.376	ENSJJAG00000012563	Pum3	93	63.376	Jaculus_jaculus
ENSSFOG00015018778	pum3	91	65.292	ENSKMAG00000010277	pum3	98	63.050	Kryptolebias_marmoratus
ENSSFOG00015018778	pum3	99	61.002	ENSLBEG00000012213	pum3	99	62.064	Labrus_bergylta
ENSSFOG00015018778	pum3	99	63.344	ENSLACG00000008312	PUM3	99	63.876	Latimeria_chalumnae
ENSSFOG00015018778	pum3	99	74.803	ENSLOCG00000012529	pum3	99	74.803	Lepisosteus_oculatus
ENSSFOG00015018778	pum3	98	65.032	ENSLAFG00000017341	PUM3	94	65.032	Loxodonta_africana
ENSSFOG00015018778	pum3	88	70.088	ENSMFAG00000001430	PUM3	87	70.088	Macaca_fascicularis
ENSSFOG00015018778	pum3	88	70.088	ENSMMUG00000002362	PUM3	86	70.088	Macaca_mulatta
ENSSFOG00015018778	pum3	88	70.088	ENSMNEG00000035288	PUM3	87	70.088	Macaca_nemestrina
ENSSFOG00015018778	pum3	98	63.622	ENSMLEG00000034820	PUM3	99	63.622	Mandrillus_leucophaeus
ENSSFOG00015018778	pum3	99	59.299	ENSMAMG00000022861	pum3	99	60.518	Mastacembelus_armatus
ENSSFOG00015018778	pum3	99	60.276	ENSMZEG00005014205	pum3	97	60.276	Maylandia_zebra
ENSSFOG00015018778	pum3	94	57.868	ENSMGAG00000002255	PUM3	93	61.495	Meleagris_gallopavo
ENSSFOG00015018778	pum3	95	66.118	ENSMAUG00000009733	Pum3	92	66.118	Mesocricetus_auratus
ENSSFOG00015018778	pum3	98	63.158	ENSMICG00000045916	PUM3	86	63.158	Microcebus_murinus
ENSSFOG00015018778	pum3	99	61.171	ENSMOCG00000014830	-	99	61.171	Microtus_ochrogaster
ENSSFOG00015018778	pum3	99	63.817	ENSMOCG00000019519	-	94	65.756	Microtus_ochrogaster
ENSSFOG00015018778	pum3	99	55.665	ENSMMOG00000012184	pum3	99	58.871	Mola_mola
ENSSFOG00015018778	pum3	97	60.726	ENSMODG00000015417	PUM3	88	60.726	Monodelphis_domestica
ENSSFOG00015018778	pum3	99	60.483	ENSMALG00000022164	pum3	92	61.596	Monopterus_albus
ENSSFOG00015018778	pum3	95	64.803	MGP_CAROLIEiJ_G0022845	Pum3	92	64.803	Mus_caroli
ENSSFOG00015018778	pum3	95	64.803	ENSMUSG00000041360	Pum3	92	64.803	Mus_musculus
ENSSFOG00015018778	pum3	98	63.492	MGP_PahariEiJ_G0014338	Pum3	94	63.492	Mus_pahari
ENSSFOG00015018778	pum3	95	64.967	MGP_SPRETEiJ_G0023763	Pum3	92	64.967	Mus_spretus
ENSSFOG00015018778	pum3	98	60.912	ENSMPUG00000005125	PUM3	99	63.166	Mustela_putorius_furo
ENSSFOG00015018778	pum3	98	64.762	ENSMLUG00000002309	PUM3	93	64.762	Myotis_lucifugus
ENSSFOG00015018778	pum3	84	66.019	ENSNGAG00000019468	Pum3	93	63.394	Nannospalax_galili
ENSSFOG00015018778	pum3	98	55.444	ENSNBRG00000021370	pum3	94	57.591	Neolamprologus_brichardi
ENSSFOG00015018778	pum3	88	69.735	ENSNLEG00000008712	PUM3	87	69.735	Nomascus_leucogenys
ENSSFOG00015018778	pum3	63	69.298	ENSMEUG00000013606	-	99	50.298	Notamacropus_eugenii
ENSSFOG00015018778	pum3	61	72.917	ENSOPRG00000004225	-	53	72.917	Ochotona_princeps
ENSSFOG00015018778	pum3	98	59.306	ENSODEG00000016477	-	93	59.306	Octodon_degus
ENSSFOG00015018778	pum3	96	60.963	ENSODEG00000003625	-	92	65.781	Octodon_degus
ENSSFOG00015018778	pum3	99	59.422	ENSONIG00000012733	pum3	99	59.422	Oreochromis_niloticus
ENSSFOG00015018778	pum3	82	67.486	ENSOANG00000014995	PUM3	99	68.066	Ornithorhynchus_anatinus
ENSSFOG00015018778	pum3	95	66.447	ENSOCUG00000004189	-	92	66.447	Oryctolagus_cuniculus
ENSSFOG00015018778	pum3	95	65.954	ENSOCUG00000026104	-	92	65.954	Oryctolagus_cuniculus
ENSSFOG00015018778	pum3	99	57.585	ENSORLG00000014935	pum3	99	57.903	Oryzias_latipes
ENSSFOG00015018778	pum3	99	57.585	ENSORLG00020002841	pum3	99	57.903	Oryzias_latipes_hni
ENSSFOG00015018778	pum3	99	57.960	ENSORLG00015015906	pum3	99	57.960	Oryzias_latipes_hsok
ENSSFOG00015018778	pum3	99	57.604	ENSOMEG00000009427	pum3	99	58.065	Oryzias_melastigma
ENSSFOG00015018778	pum3	98	63.323	ENSOGAG00000008125	-	94	63.323	Otolemur_garnettii
ENSSFOG00015018778	pum3	99	44.006	ENSOGAG00000033481	-	96	47.883	Otolemur_garnettii
ENSSFOG00015018778	pum3	96	62.957	ENSOARG00000013337	PUM3	99	64.706	Ovis_aries
ENSSFOG00015018778	pum3	99	61.192	ENSPPAG00000041337	PUM3	95	65.323	Pan_paniscus
ENSSFOG00015018778	pum3	96	62.938	ENSPPRG00000000809	PUM3	92	67.224	Panthera_pardus
ENSSFOG00015018778	pum3	96	62.771	ENSPTIG00000021934	PUM3	92	67.057	Panthera_tigris_altaica
ENSSFOG00015018778	pum3	99	61.353	ENSPTRG00000020735	PUM3	95	65.484	Pan_troglodytes
ENSSFOG00015018778	pum3	88	70.265	ENSPANG00000025118	PUM3	87	70.265	Papio_anubis
ENSSFOG00015018778	pum3	100	79.938	ENSPKIG00000022249	pum3	99	79.768	Paramormyrops_kingsleyae
ENSSFOG00015018778	pum3	99	62.946	ENSPSIG00000016272	PUM3	99	62.946	Pelodiscus_sinensis
ENSSFOG00015018778	pum3	77	64.980	ENSPMGG00000021261	pum3	99	64.980	Periophthalmus_magnuspinnatus
ENSSFOG00015018778	pum3	99	53.434	ENSPEMG00000019340	-	90	62.559	Peromyscus_maniculatus_bairdii
ENSSFOG00015018778	pum3	93	61.111	ENSPCIG00000030598	PUM3	76	64.499	Phascolarctos_cinereus
ENSSFOG00015018778	pum3	99	58.594	ENSPFOG00000001719	pum3	99	58.594	Poecilia_formosa
ENSSFOG00015018778	pum3	99	58.385	ENSPLAG00000020010	pum3	99	59.006	Poecilia_latipinna
ENSSFOG00015018778	pum3	99	58.385	ENSPMEG00000017451	pum3	99	59.006	Poecilia_mexicana
ENSSFOG00015018778	pum3	50	70.000	ENSPREG00000019478	-	69	70.000	Poecilia_reticulata
ENSSFOG00015018778	pum3	88	70.088	ENSPPYG00000019255	PUM3	87	70.088	Pongo_abelii
ENSSFOG00015018778	pum3	97	57.532	ENSPCAG00000005797	PUM3	90	57.532	Procavia_capensis
ENSSFOG00015018778	pum3	98	63.158	ENSPCOG00000027325	PUM3	99	63.158	Propithecus_coquereli
ENSSFOG00015018778	pum3	98	63.057	ENSPVAG00000016135	PUM3	89	63.057	Pteropus_vampyrus
ENSSFOG00015018778	pum3	99	60.829	ENSPNYG00000016124	pum3	99	60.829	Pundamilia_nyererei
ENSSFOG00015018778	pum3	99	72.741	ENSPNAG00000026524	pum3	100	72.741	Pygocentrus_nattereri
ENSSFOG00015018778	pum3	98	63.651	ENSRNOG00000048356	RGD1308750	94	63.651	Rattus_norvegicus
ENSSFOG00015018778	pum3	98	62.906	ENSRNOG00000012574	Pum3	99	62.906	Rattus_norvegicus
ENSSFOG00015018778	pum3	88	69.558	ENSRBIG00000036924	PUM3	87	69.381	Rhinopithecus_bieti
ENSSFOG00015018778	pum3	88	69.735	ENSRROG00000041089	PUM3	87	69.735	Rhinopithecus_roxellana
ENSSFOG00015018778	pum3	98	64.835	ENSSBOG00000028066	PUM3	94	64.835	Saimiri_boliviensis_boliviensis
ENSSFOG00015018778	pum3	97	61.406	ENSSHAG00000003730	PUM3	98	61.406	Sarcophilus_harrisii
ENSSFOG00015018778	pum3	91	61.388	ENSSMAG00000013236	pum3	99	62.179	Scophthalmus_maximus
ENSSFOG00015018778	pum3	92	64.815	ENSSDUG00000001887	pum3	99	61.654	Seriola_dumerili
ENSSFOG00015018778	pum3	95	63.132	ENSSLDG00000015766	pum3	99	61.747	Seriola_lalandi_dorsalis
ENSSFOG00015018778	pum3	99	55.574	ENSSARG00000000579	PUM3	99	60.356	Sorex_araneus
ENSSFOG00015018778	pum3	96	65.490	ENSSPUG00000001707	PUM3	99	64.937	Sphenodon_punctatus
ENSSFOG00015018778	pum3	93	65.217	ENSSPAG00000003976	pum3	99	62.385	Stegastes_partitus
ENSSFOG00015018778	pum3	96	66.397	ENSSSCG00000005227	PUM3	99	64.771	Sus_scrofa
ENSSFOG00015018778	pum3	98	65.094	ENSTGUG00000005339	PUM3	99	65.094	Taeniopygia_guttata
ENSSFOG00015018778	pum3	98	62.287	ENSTRUG00000004074	pum3	97	62.287	Takifugu_rubripes
ENSSFOG00015018778	pum3	85	68.681	ENSTNIG00000010325	pum3	96	64.390	Tetraodon_nigroviridis
ENSSFOG00015018778	pum3	82	50.568	ENSTBEG00000013058	PUM3	85	51.449	Tupaia_belangeri
ENSSFOG00015018778	pum3	96	55.648	ENSTTRG00000001062	PUM3	95	57.740	Tursiops_truncatus
ENSSFOG00015018778	pum3	96	58.557	ENSUMAG00000018443	PUM3	99	65.160	Ursus_maritimus
ENSSFOG00015018778	pum3	98	64.501	ENSVPAG00000010766	PUM3	86	69.504	Vicugna_pacos
ENSSFOG00015018778	pum3	96	62.667	ENSVVUG00000006527	PUM3	99	64.596	Vulpes_vulpes
ENSSFOG00015018778	pum3	99	53.355	ENSXETG00000011707	pum3	95	54.976	Xenopus_tropicalis
ENSSFOG00015018778	pum3	98	55.082	ENSXCOG00000006725	pum3	99	57.541	Xiphophorus_couchianus
ENSSFOG00015018778	pum3	99	58.230	ENSXMAG00000002926	pum3	99	58.230	Xiphophorus_maculatus