EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019004 (Gene tree)
Gene ID: 108922346
Gene Symbol: hnrnpu
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 13536 bases
Position: chrKV410778.1:10477554-10491089
Accession: 108922346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015029626	SAP	PF02037.27	3.4e-10	1	1
ENSSFOP00015029590	SAP	PF02037.27	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015029963	-	2271	-	ENSSFOP00015029626	756 (aa)	-	-
ENSSFOT00015029927	-	5071	XM_018732427	ENSSFOP00015029590	801 (aa)	XP_018587943	A0A1W4YHW8

Gene Model

Click here to download ENSSFOG00015019004's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019004	hnrnpu	88	46.043	ENSSFOG00015007000	-	70	49.654
ENSSFOG00015019004	hnrnpu	99	43.061	ENSSFOG00015022940	HNRNPUL1	91	46.269
ENSSFOG00015019004	hnrnpu	57	46.575	ENSSFOG00015006544	si:ch211-107m4.1	54	45.770
ENSSFOG00015019004	hnrnpu	100	80.941	ENSSFOG00015001124	hnrnpub	100	80.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019004	hnrnpu	77	67.412	ENSG00000153187	HNRNPU	99	73.000	Homo_sapiens
ENSSFOG00015019004	hnrnpu	100	64.524	ENSAPOG00000017400	hnrnpub	100	65.827	Acanthochromis_polyacanthus
ENSSFOG00015019004	hnrnpu	83	80.851	ENSAMEG00000009145	HNRNPU	78	80.851	Ailuropoda_melanoleuca
ENSSFOG00015019004	hnrnpu	100	64.524	ENSACIG00000012138	hnrnpub	100	68.041	Amphilophus_citrinellus
ENSSFOG00015019004	hnrnpu	100	65.389	ENSAOCG00000015843	hnrnpub	100	65.827	Amphiprion_ocellaris
ENSSFOG00015019004	hnrnpu	100	65.389	ENSAPEG00000014679	hnrnpub	100	65.827	Amphiprion_percula
ENSSFOG00015019004	hnrnpu	98	65.079	ENSATEG00000016178	hnrnpub	97	66.870	Anabas_testudineus
ENSSFOG00015019004	hnrnpu	84	70.833	ENSACAG00000004511	HNRNPU	79	65.491	Anolis_carolinensis
ENSSFOG00015019004	hnrnpu	88	62.228	ENSANAG00000033895	-	98	61.238	Aotus_nancymaae
ENSSFOG00015019004	hnrnpu	99	63.364	ENSACLG00000008165	hnrnpub	100	65.860	Astatotilapia_calliptera
ENSSFOG00015019004	hnrnpu	77	67.468	ENSBTAG00000007606	HNRNPU	94	59.539	Bos_taurus
ENSSFOG00015019004	hnrnpu	77	67.252	ENSCJAG00000016914	HNRNPU	98	61.104	Callithrix_jacchus
ENSSFOG00015019004	hnrnpu	77	67.308	ENSCAFG00020000918	HNRNPU	94	59.819	Canis_lupus_dingo
ENSSFOG00015019004	hnrnpu	77	67.468	ENSCHIG00000004900	HNRNPU	94	59.539	Capra_hircus
ENSSFOG00015019004	hnrnpu	77	67.572	ENSCPOG00000011887	HNRNPU	73	65.091	Cavia_porcellus
ENSSFOG00015019004	hnrnpu	88	62.092	ENSCCAG00000037859	-	98	61.104	Cebus_capucinus
ENSSFOG00015019004	hnrnpu	88	62.129	ENSCATG00000035273	HNRNPU	98	61.404	Cercocebus_atys
ENSSFOG00015019004	hnrnpu	77	67.572	ENSCLAG00000007100	HNRNPU	73	65.091	Chinchilla_lanigera
ENSSFOG00015019004	hnrnpu	77	67.412	ENSCSAG00000009219	HNRNPU	94	60.104	Chlorocebus_sabaeus
ENSSFOG00015019004	hnrnpu	82	80.851	ENSCHOG00000001387	HNRNPU	76	80.851	Choloepus_hoffmanni
ENSSFOG00015019004	hnrnpu	80	63.426	ENSCPBG00000009415	HNRNPU	72	66.836	Chrysemys_picta_bellii
ENSSFOG00015019004	hnrnpu	83	80.851	ENSCANG00000022780	HNRNPU	79	80.851	Colobus_angolensis_palliatus
ENSSFOG00015019004	hnrnpu	98	59.236	ENSCGRG00001020525	Hnrnpu	94	60.236	Cricetulus_griseus_chok1gshd
ENSSFOG00015019004	hnrnpu	76	91.489	ENSCSEG00000010804	hnrnpub	100	62.662	Cynoglossus_semilaevis
ENSSFOG00015019004	hnrnpu	75	89.362	ENSCVAG00000004280	hnrnpub	100	53.580	Cyprinodon_variegatus
ENSSFOG00015019004	hnrnpu	100	67.742	ENSDARG00000015206	hnrnpua	100	68.025	Danio_rerio
ENSSFOG00015019004	hnrnpu	99	61.637	ENSDARG00000004735	hnrnpub	100	64.946	Danio_rerio
ENSSFOG00015019004	hnrnpu	86	78.000	ENSDNOG00000000215	HNRNPU	92	78.000	Dasypus_novemcinctus
ENSSFOG00015019004	hnrnpu	77	67.572	ENSDORG00000015491	Hnrnpu	99	57.459	Dipodomys_ordii
ENSSFOG00015019004	hnrnpu	83	80.851	ENSETEG00000014565	HNRNPU	80	80.851	Echinops_telfairi
ENSSFOG00015019004	hnrnpu	77	67.628	ENSEASG00005003017	HNRNPU	94	59.795	Equus_asinus_asinus
ENSSFOG00015019004	hnrnpu	77	67.628	ENSECAG00000007955	HNRNPU	94	59.795	Equus_caballus
ENSSFOG00015019004	hnrnpu	100	67.038	ENSELUG00000011966	hnrnpua	91	73.038	Esox_lucius
ENSSFOG00015019004	hnrnpu	99	66.494	ENSELUG00000010733	hnrnpub	100	65.478	Esox_lucius
ENSSFOG00015019004	hnrnpu	72	80.851	ENSFCAG00000002156	HNRNPU	93	59.690	Felis_catus
ENSSFOG00015019004	hnrnpu	98	65.741	ENSFDAG00000006026	HNRNPU	99	82.979	Fukomys_damarensis
ENSSFOG00015019004	hnrnpu	100	60.743	ENSFHEG00000022639	hnrnpub	100	63.306	Fundulus_heteroclitus
ENSSFOG00015019004	hnrnpu	100	62.349	ENSGMOG00000001755	hnrnpub	99	62.936	Gadus_morhua
ENSSFOG00015019004	hnrnpu	92	63.224	ENSGALG00000010671	HNRNPU	89	64.789	Gallus_gallus
ENSSFOG00015019004	hnrnpu	81	67.677	ENSGAFG00000009369	hnrnpub	100	64.505	Gambusia_affinis
ENSSFOG00015019004	hnrnpu	78	73.059	ENSGACG00000004679	hnrnpub	99	62.033	Gasterosteus_aculeatus
ENSSFOG00015019004	hnrnpu	76	80.851	ENSGGOG00000004061	HNRNPU	98	61.238	Gorilla_gorilla
ENSSFOG00015019004	hnrnpu	99	63.446	ENSHBUG00000012290	hnrnpub	100	66.102	Haplochromis_burtoni
ENSSFOG00015019004	hnrnpu	78	66.719	ENSHGLG00000010594	-	94	59.690	Heterocephalus_glaber_female
ENSSFOG00015019004	hnrnpu	96	67.572	ENSHGLG00100015093	HNRNPU	91	82.979	Heterocephalus_glaber_male
ENSSFOG00015019004	hnrnpu	81	66.346	ENSHCOG00000020091	hnrnpub	100	61.730	Hippocampus_comes
ENSSFOG00015019004	hnrnpu	81	97.872	ENSIPUG00000007749	hnrnpu	98	78.462	Ictalurus_punctatus
ENSSFOG00015019004	hnrnpu	77	67.412	ENSJJAG00000011371	Hnrnpu	74	64.947	Jaculus_jaculus
ENSSFOG00015019004	hnrnpu	99	63.590	ENSKMAG00000004532	hnrnpub	100	65.403	Kryptolebias_marmoratus
ENSSFOG00015019004	hnrnpu	80	70.407	ENSLBEG00000022520	hnrnpub	100	65.207	Labrus_bergylta
ENSSFOG00015019004	hnrnpu	99	53.486	ENSLACG00000017463	HNRNPU	99	54.009	Latimeria_chalumnae
ENSSFOG00015019004	hnrnpu	83	84.789	ENSLOCG00000016652	hnrnpua	99	77.333	Lepisosteus_oculatus
ENSSFOG00015019004	hnrnpu	98	59.572	ENSLAFG00000021377	HNRNPU	94	59.764	Loxodonta_africana
ENSSFOG00015019004	hnrnpu	88	62.129	ENSMFAG00000037308	HNRNPU	98	61.404	Macaca_fascicularis
ENSSFOG00015019004	hnrnpu	77	67.412	ENSMMUG00000021098	HNRNPU	94	60.104	Macaca_mulatta
ENSSFOG00015019004	hnrnpu	88	62.129	ENSMNEG00000043645	HNRNPU	98	61.404	Macaca_nemestrina
ENSSFOG00015019004	hnrnpu	100	65.591	ENSMAMG00000007196	hnrnpub	100	65.988	Mastacembelus_armatus
ENSSFOG00015019004	hnrnpu	99	63.364	ENSMZEG00005003185	hnrnpub	100	65.860	Maylandia_zebra
ENSSFOG00015019004	hnrnpu	98	58.651	ENSMAUG00000008842	Hnrnpu	94	60.315	Mesocricetus_auratus
ENSSFOG00015019004	hnrnpu	98	59.395	ENSMICG00000004616	HNRNPU	94	60.419	Microcebus_murinus
ENSSFOG00015019004	hnrnpu	98	59.311	ENSMOCG00000015623	Hnrnpu	94	60.474	Microtus_ochrogaster
ENSSFOG00015019004	hnrnpu	83	78.723	ENSMODG00000006515	HNRNPU	78	78.723	Monodelphis_domestica
ENSSFOG00015019004	hnrnpu	99	66.102	ENSMALG00000018243	hnrnpub	98	66.834	Monopterus_albus
ENSSFOG00015019004	hnrnpu	98	59.033	MGP_CAROLIEiJ_G0014962	Hnrnpu	94	60.367	Mus_caroli
ENSSFOG00015019004	hnrnpu	77	66.667	ENSMUSG00000039630	Hnrnpu	95	60.236	Mus_musculus
ENSSFOG00015019004	hnrnpu	77	67.252	MGP_PahariEiJ_G0028193	Hnrnpu	94	59.895	Mus_pahari
ENSSFOG00015019004	hnrnpu	77	66.667	MGP_SPRETEiJ_G0015761	Hnrnpu	94	60.236	Mus_spretus
ENSSFOG00015019004	hnrnpu	83	78.723	ENSMLUG00000000475	HNRNPU	80	78.723	Myotis_lucifugus
ENSSFOG00015019004	hnrnpu	98	60.255	ENSNGAG00000019075	Hnrnpu	94	60.682	Nannospalax_galili
ENSSFOG00015019004	hnrnpu	99	63.233	ENSNBRG00000017855	hnrnpub	100	66.102	Neolamprologus_brichardi
ENSSFOG00015019004	hnrnpu	80	78.723	ENSMEUG00000000541	HNRNPU	77	78.723	Notamacropus_eugenii
ENSSFOG00015019004	hnrnpu	98	70.710	ENSONIG00000001260	hnrnpub	89	71.659	Oreochromis_niloticus
ENSSFOG00015019004	hnrnpu	76	67.267	ENSOCUG00000014469	HNRNPU	63	69.821	Oryctolagus_cuniculus
ENSSFOG00015019004	hnrnpu	100	63.377	ENSORLG00000016114	hnrnpub	100	65.269	Oryzias_latipes
ENSSFOG00015019004	hnrnpu	97	65.287	ENSORLG00020005363	hnrnpub	100	65.150	Oryzias_latipes_hni
ENSSFOG00015019004	hnrnpu	79	70.675	ENSORLG00015001190	hnrnpub	100	64.790	Oryzias_latipes_hsok
ENSSFOG00015019004	hnrnpu	79	70.888	ENSOMEG00000014951	hnrnpub	100	64.790	Oryzias_melastigma
ENSSFOG00015019004	hnrnpu	98	59.476	ENSOGAG00000014024	HNRNPU	94	58.408	Otolemur_garnettii
ENSSFOG00015019004	hnrnpu	83	80.851	ENSOARG00000004985	HNRNPU	87	80.851	Ovis_aries
ENSSFOG00015019004	hnrnpu	88	62.228	ENSPPAG00000038652	HNRNPU	98	61.238	Pan_paniscus
ENSSFOG00015019004	hnrnpu	72	80.851	ENSPPRG00000002662	HNRNPU	71	80.851	Panthera_pardus
ENSSFOG00015019004	hnrnpu	88	62.228	ENSPTRG00000002182	HNRNPU	98	61.238	Pan_troglodytes
ENSSFOG00015019004	hnrnpu	88	62.129	ENSPANG00000011643	HNRNPU	98	61.404	Papio_anubis
ENSSFOG00015019004	hnrnpu	100	80.473	ENSPKIG00000022332	hnrnpub	100	80.448	Paramormyrops_kingsleyae
ENSSFOG00015019004	hnrnpu	100	83.541	ENSPKIG00000006885	hnrnpua	100	83.666	Paramormyrops_kingsleyae
ENSSFOG00015019004	hnrnpu	83	78.723	ENSPCIG00000008657	HNRNPU	78	78.723	Phascolarctos_cinereus
ENSSFOG00015019004	hnrnpu	98	63.672	ENSPFOG00000002908	hnrnpub	100	63.550	Poecilia_formosa
ENSSFOG00015019004	hnrnpu	98	62.973	ENSPLAG00000004160	hnrnpub	100	63.626	Poecilia_latipinna
ENSSFOG00015019004	hnrnpu	98	59.080	ENSPCOG00000018655	-	94	59.869	Propithecus_coquereli
ENSSFOG00015019004	hnrnpu	76	64.869	ENSPCOG00000003883	-	94	58.527	Propithecus_coquereli
ENSSFOG00015019004	hnrnpu	77	66.987	ENSPVAG00000002581	HNRNPU	73	64.939	Pteropus_vampyrus
ENSSFOG00015019004	hnrnpu	99	63.364	ENSPNYG00000021642	hnrnpub	100	65.981	Pundamilia_nyererei
ENSSFOG00015019004	hnrnpu	100	73.455	ENSPNAG00000001055	hnrnpub	100	73.608	Pygocentrus_nattereri
ENSSFOG00015019004	hnrnpu	77	66.667	ENSRNOG00000033790	Hnrnpu	94	60.395	Rattus_norvegicus
ENSSFOG00015019004	hnrnpu	98	57.468	ENSRBIG00000031519	HNRNPU	98	60.864	Rhinopithecus_bieti
ENSSFOG00015019004	hnrnpu	98	59.343	ENSRROG00000041642	HNRNPU	98	61.486	Rhinopithecus_roxellana
ENSSFOG00015019004	hnrnpu	80	70.936	ENSSMAG00000003607	hnrnpub	100	64.976	Scophthalmus_maximus
ENSSFOG00015019004	hnrnpu	80	71.429	ENSSDUG00000005912	hnrnpub	100	67.384	Seriola_dumerili
ENSSFOG00015019004	hnrnpu	80	71.429	ENSSLDG00000004899	hnrnpub	100	67.503	Seriola_lalandi_dorsalis
ENSSFOG00015019004	hnrnpu	78	64.642	ENSSPUG00000011393	HNRNPU	89	63.056	Sphenodon_punctatus
ENSSFOG00015019004	hnrnpu	80	70.443	ENSSPAG00000011853	hnrnpub	100	65.030	Stegastes_partitus
ENSSFOG00015019004	hnrnpu	77	67.308	ENSSSCG00000010877	HNRNPU	94	59.819	Sus_scrofa
ENSSFOG00015019004	hnrnpu	100	63.669	ENSTRUG00000007759	hnrnpub	100	64.106	Takifugu_rubripes
ENSSFOG00015019004	hnrnpu	99	66.258	ENSTNIG00000009725	hnrnpub	99	84.783	Tetraodon_nigroviridis
ENSSFOG00015019004	hnrnpu	98	60.995	ENSUAMG00000021120	HNRNPU	99	59.179	Ursus_americanus
ENSSFOG00015019004	hnrnpu	98	59.527	ENSUMAG00000012322	HNRNPU	96	72.917	Ursus_maritimus
ENSSFOG00015019004	hnrnpu	76	80.851	ENSVPAG00000010520	HNRNPU	82	80.851	Vicugna_pacos
ENSSFOG00015019004	hnrnpu	77	67.308	ENSVVUG00000026524	HNRNPU	96	60.267	Vulpes_vulpes
ENSSFOG00015019004	hnrnpu	99	55.353	ENSXETG00000011386	hnrnpu	99	56.033	Xenopus_tropicalis
ENSSFOG00015019004	hnrnpu	98	63.802	ENSXMAG00000010356	hnrnpub	100	63.669	Xiphophorus_maculatus