EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019070 (Gene tree)
Gene ID: 108942351
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7078 bases
Position: chrKV411245.1:190459-197536
Accession: 108942351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015029687	GTP_EFTU	PF00009.27	3.3e-53	1	1
ENSSFOP00015029687	MMR_HSR1	PF01926.23	4.8e-08	1	1
ENSSFOP00015029687	GTP_EFTU_D2	PF03144.25	1.6e-09	1	1
ENSSFOP00015029687	GTP_EFTU_D3	PF03143.17	1.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015030024	-	1368	XM_018765659	ENSSFOP00015029687	455 (aa)	XP_018621175	-

Gene Model

Click here to download ENSSFOG00015019070's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019070's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019070	si:dkey-37o8.1	97	72.460	ENSSFOG00015003033	eef1a1a	96	72.460
ENSSFOG00015019070	si:dkey-37o8.1	98	37.668	ENSSFOG00015017544	hbs1l	63	37.668
ENSSFOG00015019070	si:dkey-37o8.1	99	71.938	ENSSFOG00015021087	eef1a2	97	71.938
ENSSFOG00015019070	si:dkey-37o8.1	96	37.868	ENSSFOG00015014731	-	74	37.868
ENSSFOG00015019070	si:dkey-37o8.1	97	72.686	ENSSFOG00015012136	EEF1A1	96	72.686
ENSSFOG00015019070	si:dkey-37o8.1	96	37.188	ENSSFOG00015011277	gspt1	76	36.281
ENSSFOG00015019070	si:dkey-37o8.1	97	72.460	ENSSFOG00015022408	-	96	72.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019070	si:dkey-37o8.1	97	82.844	ENSAPOG00000016459	si:dkey-37o8.1	97	82.844	Acanthochromis_polyacanthus
ENSSFOG00015019070	si:dkey-37o8.1	96	78.947	ENSACIG00000020985	si:dkey-37o8.1	82	78.947	Amphilophus_citrinellus
ENSSFOG00015019070	si:dkey-37o8.1	97	83.521	ENSAOCG00000002663	si:dkey-37o8.1	97	83.521	Amphiprion_ocellaris
ENSSFOG00015019070	si:dkey-37o8.1	97	83.521	ENSAPEG00000012670	si:dkey-37o8.1	97	83.521	Amphiprion_percula
ENSSFOG00015019070	si:dkey-37o8.1	93	82.701	ENSATEG00000002217	si:dkey-37o8.1	99	82.701	Anabas_testudineus
ENSSFOG00015019070	si:dkey-37o8.1	98	82.812	ENSACLG00000003519	si:dkey-37o8.1	98	82.812	Astatotilapia_calliptera
ENSSFOG00015019070	si:dkey-37o8.1	98	86.996	ENSAMXG00000002728	si:dkey-37o8.1	97	86.996	Astyanax_mexicanus
ENSSFOG00015019070	si:dkey-37o8.1	96	76.310	ENSCPBG00000020570	-	87	75.847	Chrysemys_picta_bellii
ENSSFOG00015019070	si:dkey-37o8.1	97	78.652	ENSCSEG00000019807	si:dkey-37o8.1	97	78.652	Cynoglossus_semilaevis
ENSSFOG00015019070	si:dkey-37o8.1	97	82.393	ENSCVAG00000009828	si:dkey-37o8.1	97	82.393	Cyprinodon_variegatus
ENSSFOG00015019070	si:dkey-37o8.1	98	82.735	ENSDARG00000071727	si:dkey-37o8.1	92	82.735	Danio_rerio
ENSSFOG00015019070	si:dkey-37o8.1	98	83.929	ENSELUG00000007495	si:dkey-37o8.1	98	83.929	Esox_lucius
ENSSFOG00015019070	si:dkey-37o8.1	99	81.898	ENSFHEG00000017452	si:dkey-37o8.1	99	81.898	Fundulus_heteroclitus
ENSSFOG00015019070	si:dkey-37o8.1	97	77.201	ENSGMOG00000006122	si:dkey-37o8.1	98	77.201	Gadus_morhua
ENSSFOG00015019070	si:dkey-37o8.1	98	77.232	ENSGAFG00000000367	si:dkey-37o8.1	99	77.232	Gambusia_affinis
ENSSFOG00015019070	si:dkey-37o8.1	98	80.761	ENSGACG00000004505	si:dkey-37o8.1	98	80.761	Gasterosteus_aculeatus
ENSSFOG00015019070	si:dkey-37o8.1	96	77.449	ENSGAGG00000007724	-	93	79.808	Gopherus_agassizii
ENSSFOG00015019070	si:dkey-37o8.1	98	83.036	ENSHBUG00000015515	si:dkey-37o8.1	98	83.036	Haplochromis_burtoni
ENSSFOG00015019070	si:dkey-37o8.1	97	74.492	ENSHCOG00000001215	si:dkey-37o8.1	98	74.492	Hippocampus_comes
ENSSFOG00015019070	si:dkey-37o8.1	99	83.664	ENSIPUG00000004067	si:dkey-37o8.1	99	83.664	Ictalurus_punctatus
ENSSFOG00015019070	si:dkey-37o8.1	99	82.483	ENSKMAG00000015910	si:dkey-37o8.1	98	82.483	Kryptolebias_marmoratus
ENSSFOG00015019070	si:dkey-37o8.1	97	83.070	ENSLBEG00000021334	si:dkey-37o8.1	88	83.070	Labrus_bergylta
ENSSFOG00015019070	si:dkey-37o8.1	97	81.264	ENSLACG00000003948	si:dkey-37o8.1	96	81.264	Latimeria_chalumnae
ENSSFOG00015019070	si:dkey-37o8.1	98	84.494	ENSLOCG00000011245	si:dkey-37o8.1	97	84.494	Lepisosteus_oculatus
ENSSFOG00015019070	si:dkey-37o8.1	97	72.460	ENSMAMG00000009907	si:dkey-37o8.1	93	72.460	Mastacembelus_armatus
ENSSFOG00015019070	si:dkey-37o8.1	98	82.812	ENSMZEG00005018358	si:dkey-37o8.1	98	82.812	Maylandia_zebra
ENSSFOG00015019070	si:dkey-37o8.1	98	80.804	ENSMMOG00000004111	si:dkey-37o8.1	97	80.804	Mola_mola
ENSSFOG00015019070	si:dkey-37o8.1	96	77.626	ENSMALG00000017152	si:dkey-37o8.1	99	77.626	Monopterus_albus
ENSSFOG00015019070	si:dkey-37o8.1	98	82.812	ENSNBRG00000013552	si:dkey-37o8.1	98	82.812	Neolamprologus_brichardi
ENSSFOG00015019070	si:dkey-37o8.1	98	82.143	ENSONIG00000006165	si:dkey-37o8.1	98	82.143	Oreochromis_niloticus
ENSSFOG00015019070	si:dkey-37o8.1	99	82.000	ENSORLG00000019066	si:dkey-37o8.1	98	82.000	Oryzias_latipes
ENSSFOG00015019070	si:dkey-37o8.1	99	82.000	ENSORLG00020008094	si:dkey-37o8.1	98	82.000	Oryzias_latipes_hni
ENSSFOG00015019070	si:dkey-37o8.1	99	82.000	ENSORLG00015008410	si:dkey-37o8.1	98	82.000	Oryzias_latipes_hsok
ENSSFOG00015019070	si:dkey-37o8.1	98	82.812	ENSOMEG00000001868	si:dkey-37o8.1	98	82.812	Oryzias_melastigma
ENSSFOG00015019070	si:dkey-37o8.1	98	89.686	ENSPKIG00000017246	si:dkey-37o8.1	97	89.686	Paramormyrops_kingsleyae
ENSSFOG00015019070	si:dkey-37o8.1	57	70.677	ENSPSIG00000008080	-	94	70.677	Pelodiscus_sinensis
ENSSFOG00015019070	si:dkey-37o8.1	99	81.898	ENSPFOG00000013173	si:dkey-37o8.1	99	81.898	Poecilia_formosa
ENSSFOG00015019070	si:dkey-37o8.1	96	81.693	ENSPLAG00000010405	si:dkey-37o8.1	99	80.795	Poecilia_latipinna
ENSSFOG00015019070	si:dkey-37o8.1	99	82.119	ENSPMEG00000015233	si:dkey-37o8.1	99	82.119	Poecilia_mexicana
ENSSFOG00015019070	si:dkey-37o8.1	98	81.879	ENSPREG00000006280	si:dkey-37o8.1	98	81.879	Poecilia_reticulata
ENSSFOG00015019070	si:dkey-37o8.1	98	82.143	ENSPNYG00000002059	si:dkey-37o8.1	98	82.143	Pundamilia_nyererei
ENSSFOG00015019070	si:dkey-37o8.1	98	85.843	ENSPNAG00000009990	si:dkey-37o8.1	97	86.230	Pygocentrus_nattereri
ENSSFOG00015019070	si:dkey-37o8.1	98	82.589	ENSSMAG00000016143	si:dkey-37o8.1	98	82.589	Scophthalmus_maximus
ENSSFOG00015019070	si:dkey-37o8.1	97	83.296	ENSSDUG00000009163	si:dkey-37o8.1	97	83.296	Seriola_dumerili
ENSSFOG00015019070	si:dkey-37o8.1	97	83.070	ENSSLDG00000023761	si:dkey-37o8.1	97	83.070	Seriola_lalandi_dorsalis
ENSSFOG00015019070	si:dkey-37o8.1	98	74.550	ENSSPUG00000007467	-	97	74.718	Sphenodon_punctatus
ENSSFOG00015019070	si:dkey-37o8.1	97	84.199	ENSSPAG00000013856	si:dkey-37o8.1	97	84.199	Stegastes_partitus
ENSSFOG00015019070	si:dkey-37o8.1	98	82.432	ENSTRUG00000009006	si:dkey-37o8.1	98	82.432	Takifugu_rubripes
ENSSFOG00015019070	si:dkey-37o8.1	98	81.696	ENSTNIG00000017138	si:dkey-37o8.1	96	81.696	Tetraodon_nigroviridis
ENSSFOG00015019070	si:dkey-37o8.1	96	76.256	ENSXETG00000017744	42Sp50	97	75.556	Xenopus_tropicalis
ENSSFOG00015019070	si:dkey-37o8.1	98	82.103	ENSXCOG00000012296	si:dkey-37o8.1	98	82.103	Xiphophorus_couchianus
ENSSFOG00015019070	si:dkey-37o8.1	99	81.678	ENSXMAG00000001998	si:dkey-37o8.1	99	81.678	Xiphophorus_maculatus