EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019203 (Gene tree)
Gene ID: 108931763
Gene Symbol: -
Alias: -
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 17514 bases
Position: chrKV410962.1:185133-202646
Accession: 108931763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015029896	Not3	PF04065.15	1.3e-95	1	1
ENSSFOP00015029896	NOT2_3_5	PF04153.18	6.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015030236	-	4800	XM_018747766	ENSSFOP00015029896	897 (aa)	XP_018603282	A0A1W4ZHU6

Gene Model

Click here to download ENSSFOG00015019203's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019203	-	100	73.268	ENSSFOG00015000248	cnot3	100	75.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019203	-	68	91.776	ENSG00000088038	CNOT3	100	94.845	Homo_sapiens
ENSSFOG00015019203	-	56	95.299	ENSAPOG00000015499	CNOT3	92	83.274	Acanthochromis_polyacanthus
ENSSFOG00015019203	-	68	92.105	ENSAMEG00000004528	CNOT3	87	91.803	Ailuropoda_melanoleuca
ENSSFOG00015019203	-	68	93.750	ENSACIG00000003652	cnot3b	99	93.750	Amphilophus_citrinellus
ENSSFOG00015019203	-	70	95.299	ENSACIG00000006635	cnot3a	100	95.299	Amphilophus_citrinellus
ENSSFOG00015019203	-	50	61.894	ENSAOCG00000023769	cnot3a	99	68.606	Amphiprion_ocellaris
ENSSFOG00015019203	-	97	63.169	ENSAOCG00000018385	-	99	80.383	Amphiprion_ocellaris
ENSSFOG00015019203	-	51	66.667	ENSAPEG00000006624	cnot3a	100	71.038	Amphiprion_percula
ENSSFOG00015019203	-	97	66.703	ENSAPEG00000002640	cnot3b	99	97.143	Amphiprion_percula
ENSSFOG00015019203	-	100	70.166	ENSATEG00000015777	cnot3b	100	70.564	Anabas_testudineus
ENSSFOG00015019203	-	100	69.447	ENSATEG00000022737	cnot3a	100	69.946	Anabas_testudineus
ENSSFOG00015019203	-	73	91.531	ENSACAG00000016085	CNOT3	88	92.105	Anolis_carolinensis
ENSSFOG00015019203	-	68	91.776	ENSANAG00000025756	CNOT3	85	91.475	Aotus_nancymaae
ENSSFOG00015019203	-	100	69.872	ENSACLG00000016702	cnot3b	100	70.138	Astatotilapia_calliptera
ENSSFOG00015019203	-	100	69.075	ENSAMXG00000009447	cnot3b	97	92.432	Astyanax_mexicanus
ENSSFOG00015019203	-	100	67.025	ENSAMXG00000012359	cnot3a	100	68.770	Astyanax_mexicanus
ENSSFOG00015019203	-	69	90.354	ENSBTAG00000014900	CNOT3	86	91.475	Bos_taurus
ENSSFOG00015019203	-	68	91.776	ENSCJAG00000001094	CNOT3	85	91.475	Callithrix_jacchus
ENSSFOG00015019203	-	68	91.776	ENSCAFG00000002699	CNOT3	86	91.475	Canis_familiaris
ENSSFOG00015019203	-	68	91.776	ENSCAFG00020018359	CNOT3	86	91.475	Canis_lupus_dingo
ENSSFOG00015019203	-	64	88.387	ENSCHIG00000015302	CNOT3	74	89.474	Capra_hircus
ENSSFOG00015019203	-	68	91.776	ENSTSYG00000008058	CNOT3	85	91.475	Carlito_syrichta
ENSSFOG00015019203	-	69	90.354	ENSCAPG00000009533	CNOT3	85	91.475	Cavia_aperea
ENSSFOG00015019203	-	69	90.354	ENSCPOG00000020741	CNOT3	85	91.475	Cavia_porcellus
ENSSFOG00015019203	-	68	91.776	ENSCCAG00000036290	CNOT3	85	91.475	Cebus_capucinus
ENSSFOG00015019203	-	68	91.776	ENSCATG00000030324	CNOT3	85	91.475	Cercocebus_atys
ENSSFOG00015019203	-	69	90.354	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSSFOG00015019203	-	68	91.776	ENSCSAG00000001900	CNOT3	85	91.475	Chlorocebus_sabaeus
ENSSFOG00015019203	-	69	91.558	ENSCPBG00000011655	CNOT3	97	92.131	Chrysemys_picta_bellii
ENSSFOG00015019203	-	64	57.100	ENSCING00000000293	-	68	67.355	Ciona_intestinalis
ENSSFOG00015019203	-	69	90.032	ENSCANG00000013408	CNOT3	85	91.475	Colobus_angolensis_palliatus
ENSSFOG00015019203	-	73	80.601	ENSCGRG00001000855	Cnot3	94	91.803	Cricetulus_griseus_chok1gshd
ENSSFOG00015019203	-	100	68.743	ENSCSEG00000003574	cnot3a	100	69.338	Cynoglossus_semilaevis
ENSSFOG00015019203	-	96	82.028	ENSCSEG00000016892	cnot3b	100	82.028	Cynoglossus_semilaevis
ENSSFOG00015019203	-	100	69.770	ENSCVAG00000008168	cnot3a	100	68.988	Cyprinodon_variegatus
ENSSFOG00015019203	-	100	67.091	ENSDARG00000007135	cnot3a	100	68.489	Danio_rerio
ENSSFOG00015019203	-	100	70.569	ENSDARG00000019842	cnot3b	100	69.762	Danio_rerio
ENSSFOG00015019203	-	68	91.447	ENSDNOG00000045972	CNOT3	87	91.148	Dasypus_novemcinctus
ENSSFOG00015019203	-	68	91.776	ENSDORG00000008021	Cnot3	100	91.475	Dipodomys_ordii
ENSSFOG00015019203	-	53	100.000	ENSETEG00000006305	CNOT3	60	100.000	Echinops_telfairi
ENSSFOG00015019203	-	68	70.779	ENSEBUG00000010437	cnot3a	82	68.182	Eptatretus_burgeri
ENSSFOG00015019203	-	68	91.776	ENSEASG00005021591	CNOT3	84	91.475	Equus_asinus_asinus
ENSSFOG00015019203	-	68	91.776	ENSECAG00000023181	CNOT3	84	91.475	Equus_caballus
ENSSFOG00015019203	-	100	72.766	ENSELUG00000000953	cnot3b	100	70.688	Esox_lucius
ENSSFOG00015019203	-	100	65.121	ENSELUG00000014743	cnot3a	100	66.075	Esox_lucius
ENSSFOG00015019203	-	73	80.000	ENSFCAG00000014042	CNOT3	88	91.475	Felis_catus
ENSSFOG00015019203	-	100	67.873	ENSFHEG00000023166	cnot3a	97	95.726	Fundulus_heteroclitus
ENSSFOG00015019203	-	100	67.201	ENSFHEG00000001696	cnot3b	100	68.404	Fundulus_heteroclitus
ENSSFOG00015019203	-	94	63.918	ENSGMOG00000005365	cnot3a	98	64.726	Gadus_morhua
ENSSFOG00015019203	-	55	61.765	ENSGAFG00000013094	cnot3a	100	69.441	Gambusia_affinis
ENSSFOG00015019203	-	100	68.461	ENSGAFG00000003459	cnot3b	100	68.099	Gambusia_affinis
ENSSFOG00015019203	-	94	63.230	ENSGACG00000011489	cnot3a	98	64.097	Gasterosteus_aculeatus
ENSSFOG00015019203	-	67	91.339	ENSGAGG00000012677	CNOT3	99	91.339	Gopherus_agassizii
ENSSFOG00015019203	-	68	91.776	ENSGGOG00000012996	CNOT3	100	91.475	Gorilla_gorilla
ENSSFOG00015019203	-	99	62.771	ENSHBUG00000019699	cnot3b	99	63.558	Haplochromis_burtoni
ENSSFOG00015019203	-	69	90.354	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSSFOG00015019203	-	60	84.674	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSSFOG00015019203	-	91	86.758	ENSHCOG00000020968	cnot3a	100	69.828	Hippocampus_comes
ENSSFOG00015019203	-	100	67.394	ENSIPUG00000009046	cnot3b	100	66.667	Ictalurus_punctatus
ENSSFOG00015019203	-	100	63.146	ENSIPUG00000000167	cnot3	100	64.466	Ictalurus_punctatus
ENSSFOG00015019203	-	68	91.776	ENSSTOG00000028248	CNOT3	85	91.475	Ictidomys_tridecemlineatus
ENSSFOG00015019203	-	68	92.105	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSSFOG00015019203	-	72	92.814	ENSKMAG00000004863	cnot3a	100	92.814	Kryptolebias_marmoratus
ENSSFOG00015019203	-	100	68.461	ENSKMAG00000018723	cnot3b	100	70.172	Kryptolebias_marmoratus
ENSSFOG00015019203	-	96	69.248	ENSLBEG00000018278	cnot3b	99	69.119	Labrus_bergylta
ENSSFOG00015019203	-	56	91.135	ENSLBEG00000017296	cnot3a	86	91.135	Labrus_bergylta
ENSSFOG00015019203	-	69	91.776	ENSLACG00000009742	CNOT3	90	91.475	Latimeria_chalumnae
ENSSFOG00015019203	-	58	98.204	ENSLOCG00000000005	cnot3b	87	96.629	Lepisosteus_oculatus
ENSSFOG00015019203	-	68	90.820	ENSLAFG00000022133	CNOT3	85	90.523	Loxodonta_africana
ENSSFOG00015019203	-	68	91.776	ENSMFAG00000040073	CNOT3	85	91.475	Macaca_fascicularis
ENSSFOG00015019203	-	61	92.857	ENSMMUG00000009698	CNOT3	100	98.039	Macaca_mulatta
ENSSFOG00015019203	-	68	91.776	ENSMNEG00000036750	CNOT3	85	91.475	Macaca_nemestrina
ENSSFOG00015019203	-	68	91.776	ENSMLEG00000036579	CNOT3	85	91.475	Mandrillus_leucophaeus
ENSSFOG00015019203	-	100	70.168	ENSMAMG00000019357	cnot3b	100	71.908	Mastacembelus_armatus
ENSSFOG00015019203	-	100	70.043	ENSMZEG00005002466	cnot3b	100	71.168	Maylandia_zebra
ENSSFOG00015019203	-	73	80.601	ENSMAUG00000014996	Cnot3	86	91.803	Mesocricetus_auratus
ENSSFOG00015019203	-	69	89.490	ENSMICG00000002370	CNOT3	84	91.475	Microcebus_murinus
ENSSFOG00015019203	-	51	65.466	ENSMMOG00000016446	cnot3a	100	68.251	Mola_mola
ENSSFOG00015019203	-	68	92.735	ENSMMOG00000013086	cnot3b	99	92.735	Mola_mola
ENSSFOG00015019203	-	60	92.434	ENSMODG00000004066	CNOT3	76	92.131	Monodelphis_domestica
ENSSFOG00015019203	-	68	90.878	ENSMALG00000004936	cnot3b	100	90.572	Monopterus_albus
ENSSFOG00015019203	-	100	68.483	ENSMALG00000009204	cnot3a	100	68.427	Monopterus_albus
ENSSFOG00015019203	-	68	92.105	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSSFOG00015019203	-	68	92.105	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSSFOG00015019203	-	68	92.105	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSSFOG00015019203	-	68	92.105	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSSFOG00015019203	-	69	90.354	ENSMPUG00000010352	CNOT3	85	91.475	Mustela_putorius_furo
ENSSFOG00015019203	-	68	91.776	ENSNGAG00000013266	Cnot3	85	91.475	Nannospalax_galili
ENSSFOG00015019203	-	83	88.255	ENSNBRG00000003336	cnot3b	98	90.265	Neolamprologus_brichardi
ENSSFOG00015019203	-	68	91.776	ENSNLEG00000006272	CNOT3	84	91.475	Nomascus_leucogenys
ENSSFOG00015019203	-	74	79.679	ENSODEG00000000705	CNOT3	100	91.475	Octodon_degus
ENSSFOG00015019203	-	100	69.181	ENSONIG00000007047	cnot3b	100	70.374	Oreochromis_niloticus
ENSSFOG00015019203	-	55	63.672	ENSONIG00000006568	cnot3a	100	70.151	Oreochromis_niloticus
ENSSFOG00015019203	-	68	91.776	ENSOCUG00000007691	CNOT3	85	91.475	Oryctolagus_cuniculus
ENSSFOG00015019203	-	100	70.933	ENSORLG00020005779	cnot3b	100	71.429	Oryzias_latipes_hni
ENSSFOG00015019203	-	55	65.310	ENSORLG00015019021	cnot3b	100	71.444	Oryzias_latipes_hsok
ENSSFOG00015019203	-	100	68.415	ENSORLG00015013729	cnot3a	100	69.290	Oryzias_latipes_hsok
ENSSFOG00015019203	-	100	70.247	ENSOMEG00000015557	cnot3b	100	70.626	Oryzias_melastigma
ENSSFOG00015019203	-	100	67.961	ENSOMEG00000010309	cnot3a	100	92.460	Oryzias_melastigma
ENSSFOG00015019203	-	73	80.328	ENSOGAG00000006945	CNOT3	87	91.475	Otolemur_garnettii
ENSSFOG00015019203	-	68	91.776	ENSPPAG00000002748	CNOT3	85	91.475	Pan_paniscus
ENSSFOG00015019203	-	73	80.000	ENSPPRG00000011705	CNOT3	88	91.475	Panthera_pardus
ENSSFOG00015019203	-	67	83.235	ENSPTIG00000008781	CNOT3	99	81.143	Panthera_tigris_altaica
ENSSFOG00015019203	-	68	91.776	ENSPTRG00000011444	CNOT3	85	91.475	Pan_troglodytes
ENSSFOG00015019203	-	68	91.776	ENSPTRG00000046717	-	85	91.475	Pan_troglodytes
ENSSFOG00015019203	-	68	91.776	ENSPANG00000009375	CNOT3	85	91.475	Papio_anubis
ENSSFOG00015019203	-	100	70.644	ENSPKIG00000011733	CNOT3	100	69.588	Paramormyrops_kingsleyae
ENSSFOG00015019203	-	97	74.578	ENSPKIG00000015967	-	100	98.718	Paramormyrops_kingsleyae
ENSSFOG00015019203	-	98	63.315	ENSPMGG00000022539	cnot3b	99	63.094	Periophthalmus_magnuspinnatus
ENSSFOG00015019203	-	73	81.148	ENSPEMG00000024185	Cnot3	100	91.803	Peromyscus_maniculatus_bairdii
ENSSFOG00015019203	-	73	92.105	ENSPCIG00000023018	CNOT3	91	91.803	Phascolarctos_cinereus
ENSSFOG00015019203	-	75	92.667	ENSPFOG00000008693	cnot3a	100	90.645	Poecilia_formosa
ENSSFOG00015019203	-	100	69.364	ENSPFOG00000007168	cnot3b	100	68.030	Poecilia_formosa
ENSSFOG00015019203	-	100	69.364	ENSPLAG00000013457	cnot3b	100	68.030	Poecilia_latipinna
ENSSFOG00015019203	-	100	69.860	ENSPMEG00000010184	cnot3b	100	68.138	Poecilia_mexicana
ENSSFOG00015019203	-	69	95.745	ENSPREG00000007592	cnot3a	100	93.089	Poecilia_reticulata
ENSSFOG00015019203	-	99	63.765	ENSPREG00000000662	cnot3b	97	64.744	Poecilia_reticulata
ENSSFOG00015019203	-	68	91.447	ENSPPYG00000010372	CNOT3	85	91.148	Pongo_abelii
ENSSFOG00015019203	-	52	94.068	ENSPCAG00000011999	CNOT3	56	94.068	Procavia_capensis
ENSSFOG00015019203	-	69	89.490	ENSPCOG00000017673	CNOT3	89	91.475	Propithecus_coquereli
ENSSFOG00015019203	-	69	89.389	ENSPVAG00000015564	CNOT3	87	90.492	Pteropus_vampyrus
ENSSFOG00015019203	-	99	63.164	ENSPNYG00000003358	cnot3b	99	63.558	Pundamilia_nyererei
ENSSFOG00015019203	-	100	73.593	ENSPNAG00000027459	cnot3b	100	70.820	Pygocentrus_nattereri
ENSSFOG00015019203	-	100	68.240	ENSPNAG00000017679	cnot3a	100	68.870	Pygocentrus_nattereri
ENSSFOG00015019203	-	68	92.105	ENSRNOG00000053234	Cnot3	100	91.803	Rattus_norvegicus
ENSSFOG00015019203	-	68	91.776	ENSRBIG00000031025	CNOT3	85	91.475	Rhinopithecus_bieti
ENSSFOG00015019203	-	68	91.776	ENSRROG00000003872	CNOT3	85	91.475	Rhinopithecus_roxellana
ENSSFOG00015019203	-	68	91.776	ENSSBOG00000030268	CNOT3	85	91.475	Saimiri_boliviensis_boliviensis
ENSSFOG00015019203	-	100	70.179	ENSSMAG00000016031	cnot3b	100	70.588	Scophthalmus_maximus
ENSSFOG00015019203	-	53	63.105	ENSSMAG00000013235	cnot3a	100	69.664	Scophthalmus_maximus
ENSSFOG00015019203	-	100	72.152	ENSSDUG00000003428	cnot3b	100	72.000	Seriola_dumerili
ENSSFOG00015019203	-	81	95.726	ENSSDUG00000008181	cnot3a	100	95.726	Seriola_dumerili
ENSSFOG00015019203	-	100	72.046	ENSSLDG00000014376	cnot3b	100	71.895	Seriola_lalandi_dorsalis
ENSSFOG00015019203	-	73	91.857	ENSSPUG00000008510	CNOT3	89	92.131	Sphenodon_punctatus
ENSSFOG00015019203	-	66	91.844	ENSSPAG00000003858	cnot3a	93	91.844	Stegastes_partitus
ENSSFOG00015019203	-	100	72.169	ENSSPAG00000001429	cnot3b	100	71.789	Stegastes_partitus
ENSSFOG00015019203	-	68	91.776	ENSSSCG00000003264	CNOT3	84	91.475	Sus_scrofa
ENSSFOG00015019203	-	99	91.398	ENSTRUG00000007248	cnot3b	91	91.398	Takifugu_rubripes
ENSSFOG00015019203	-	100	68.764	ENSTRUG00000015732	cnot3a	100	69.826	Takifugu_rubripes
ENSSFOG00015019203	-	94	66.168	ENSTNIG00000008082	cnot3a	100	65.950	Tetraodon_nigroviridis
ENSSFOG00015019203	-	94	66.065	ENSTNIG00000005663	cnot3b	100	67.275	Tetraodon_nigroviridis
ENSSFOG00015019203	-	68	92.105	ENSUAMG00000005234	CNOT3	85	91.803	Ursus_americanus
ENSSFOG00015019203	-	60	89.928	ENSUMAG00000010934	CNOT3	86	93.277	Ursus_maritimus
ENSSFOG00015019203	-	68	91.776	ENSVVUG00000008239	CNOT3	85	91.475	Vulpes_vulpes
ENSSFOG00015019203	-	100	59.155	ENSXETG00000003166	cnot3	88	90.939	Xenopus_tropicalis
ENSSFOG00015019203	-	100	66.993	ENSXCOG00000019460	cnot3a	97	95.299	Xiphophorus_couchianus
ENSSFOG00015019203	-	96	65.914	ENSXCOG00000018976	cnot3b	99	65.345	Xiphophorus_couchianus
ENSSFOG00015019203	-	100	67.979	ENSXMAG00000014176	cnot3b	100	68.506	Xiphophorus_maculatus
ENSSFOG00015019203	-	100	69.071	ENSXMAG00000012273	cnot3a	100	69.475	Xiphophorus_maculatus