EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015019264 (Gene tree)
Gene ID: 108923333
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 45521 bases
Position: chrKV410824.1:5212436-5257956
Accession: 108923333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030006	SAP	PF02037.27	3.9e-08	1	1
ENSSFOP00015029993	SAP	PF02037.27	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015030346	-	3196	XM_018734010	ENSSFOP00015030006	468 (aa)	XP_018589526	A0A1W4YML0
ENSSFOT00015030333	-	3241	XM_018734009	ENSSFOP00015029993	483 (aa)	XP_018589525	A0A1W4YM60

Gene Model

Click here to download ENSSFOG00015019264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019264	rad18	76	46.791	ENSG00000070950	RAD18	99	60.000	Homo_sapiens
ENSSFOG00015019264	rad18	100	50.100	ENSAPOG00000005260	rad18	81	55.062	Acanthochromis_polyacanthus
ENSSFOG00015019264	rad18	80	43.541	ENSAMEG00000012375	RAD18	72	42.824	Ailuropoda_melanoleuca
ENSSFOG00015019264	rad18	74	49.206	ENSACIG00000020655	rad18	88	48.942	Amphilophus_citrinellus
ENSSFOG00015019264	rad18	79	55.637	ENSAOCG00000004507	rad18	96	50.308	Amphiprion_ocellaris
ENSSFOG00015019264	rad18	89	52.772	ENSAPEG00000016837	rad18	98	51.188	Amphiprion_percula
ENSSFOG00015019264	rad18	74	45.125	ENSAPLG00000003138	RAD18	75	44.011	Anas_platyrhynchos
ENSSFOG00015019264	rad18	80	45.547	ENSANAG00000033360	RAD18	76	44.192	Aotus_nancymaae
ENSSFOG00015019264	rad18	100	51.076	ENSACLG00000023506	rad18	100	50.980	Astatotilapia_calliptera
ENSSFOG00015019264	rad18	94	52.298	ENSAMXG00000002534	rad18	97	53.708	Astyanax_mexicanus
ENSSFOG00015019264	rad18	81	46.410	ENSBTAG00000012142	RAD18	82	44.500	Bos_taurus
ENSSFOG00015019264	rad18	96	40.695	ENSCJAG00000040303	RAD18	78	45.128	Callithrix_jacchus
ENSSFOG00015019264	rad18	80	47.409	ENSCAFG00000005548	RAD18	75	46.114	Canis_familiaris
ENSSFOG00015019264	rad18	80	47.409	ENSCAFG00020009228	RAD18	75	46.114	Canis_lupus_dingo
ENSSFOG00015019264	rad18	76	47.849	ENSCHIG00000007965	RAD18	96	45.277	Capra_hircus
ENSSFOG00015019264	rad18	79	46.154	ENSTSYG00000012189	RAD18	78	45.385	Carlito_syrichta
ENSSFOG00015019264	rad18	81	39.949	ENSCAPG00000000356	RAD18	83	41.734	Cavia_aperea
ENSSFOG00015019264	rad18	76	47.411	ENSCPOG00000013890	RAD18	72	46.866	Cavia_porcellus
ENSSFOG00015019264	rad18	80	45.547	ENSCCAG00000022920	RAD18	76	44.444	Cebus_capucinus
ENSSFOG00015019264	rad18	80	46.547	ENSCATG00000039277	RAD18	78	45.269	Cercocebus_atys
ENSSFOG00015019264	rad18	76	46.739	ENSCLAG00000003652	RAD18	72	46.049	Chinchilla_lanigera
ENSSFOG00015019264	rad18	80	45.663	ENSCSAG00000010783	RAD18	75	44.444	Chlorocebus_sabaeus
ENSSFOG00015019264	rad18	80	47.409	ENSCPBG00000014787	RAD18	81	45.312	Chrysemys_picta_bellii
ENSSFOG00015019264	rad18	80	45.408	ENSCANG00000007308	RAD18	76	44.192	Colobus_angolensis_palliatus
ENSSFOG00015019264	rad18	78	44.652	ENSCGRG00001010209	-	74	42.708	Cricetulus_griseus_chok1gshd
ENSSFOG00015019264	rad18	81	44.961	ENSCGRG00001018154	-	84	43.073	Cricetulus_griseus_chok1gshd
ENSSFOG00015019264	rad18	78	44.652	ENSCGRG00000019636	-	74	42.708	Cricetulus_griseus_crigri
ENSSFOG00015019264	rad18	81	44.961	ENSCGRG00000007283	-	84	43.073	Cricetulus_griseus_crigri
ENSSFOG00015019264	rad18	90	50.917	ENSCSEG00000002516	rad18	82	55.438	Cynoglossus_semilaevis
ENSSFOG00015019264	rad18	91	52.412	ENSDARG00000027938	rad18	97	52.184	Danio_rerio
ENSSFOG00015019264	rad18	88	44.289	ENSDNOG00000040055	RAD18	84	43.056	Dasypus_novemcinctus
ENSSFOG00015019264	rad18	84	43.552	ENSDORG00000001099	Rad18	82	42.308	Dipodomys_ordii
ENSSFOG00015019264	rad18	62	45.215	ENSETEG00000002268	RAD18	66	42.812	Echinops_telfairi
ENSSFOG00015019264	rad18	80	48.187	ENSEASG00005013316	RAD18	71	46.770	Equus_asinus_asinus
ENSSFOG00015019264	rad18	83	46.455	ENSECAG00000010746	RAD18	78	45.122	Equus_caballus
ENSSFOG00015019264	rad18	68	44.954	ENSEEUG00000000236	-	71	43.731	Erinaceus_europaeus
ENSSFOG00015019264	rad18	99	50.772	ENSELUG00000000733	rad18	99	50.696	Esox_lucius
ENSSFOG00015019264	rad18	79	47.769	ENSFCAG00000025747	RAD18	74	46.457	Felis_catus
ENSSFOG00015019264	rad18	78	46.296	ENSFALG00000013625	RAD18	83	45.213	Ficedula_albicollis
ENSSFOG00015019264	rad18	76	46.866	ENSFDAG00000009907	RAD18	72	45.093	Fukomys_damarensis
ENSSFOG00015019264	rad18	78	45.358	ENSGALG00000008368	RAD18	76	43.112	Gallus_gallus
ENSSFOG00015019264	rad18	79	57.373	ENSGACG00000000920	rad18	84	56.300	Gasterosteus_aculeatus
ENSSFOG00015019264	rad18	72	45.977	ENSGAGG00000005184	RAD18	73	43.605	Gopherus_agassizii
ENSSFOG00015019264	rad18	80	46.193	ENSGGOG00000008391	RAD18	76	44.862	Gorilla_gorilla
ENSSFOG00015019264	rad18	91	48.008	ENSHBUG00000013322	rad18	99	47.899	Haplochromis_burtoni
ENSSFOG00015019264	rad18	63	48.515	ENSHGLG00000009196	-	95	45.223	Heterocephalus_glaber_female
ENSSFOG00015019264	rad18	63	48.515	ENSHGLG00100017675	-	95	45.223	Heterocephalus_glaber_male
ENSSFOG00015019264	rad18	94	53.982	ENSIPUG00000018681	rad18	86	57.632	Ictalurus_punctatus
ENSSFOG00015019264	rad18	64	49.180	ENSSTOG00000004870	-	95	48.197	Ictidomys_tridecemlineatus
ENSSFOG00015019264	rad18	81	44.275	ENSJJAG00000001484	Rad18	84	42.317	Jaculus_jaculus
ENSSFOG00015019264	rad18	78	57.908	ENSKMAG00000020725	rad18	78	57.653	Kryptolebias_marmoratus
ENSSFOG00015019264	rad18	60	43.434	ENSLACG00000018437	RAD18	94	43.434	Latimeria_chalumnae
ENSSFOG00015019264	rad18	83	58.163	ENSLOCG00000010629	rad18	86	58.158	Lepisosteus_oculatus
ENSSFOG00015019264	rad18	78	46.579	ENSLAFG00000004667	RAD18	77	46.579	Loxodonta_africana
ENSSFOG00015019264	rad18	80	46.803	ENSMFAG00000028864	RAD18	76	45.524	Macaca_fascicularis
ENSSFOG00015019264	rad18	80	44.416	ENSMMUG00000020013	RAD18	97	46.984	Macaca_mulatta
ENSSFOG00015019264	rad18	80	44.416	ENSMNEG00000013464	RAD18	76	45.269	Macaca_nemestrina
ENSSFOG00015019264	rad18	80	46.547	ENSMLEG00000014306	RAD18	76	45.269	Mandrillus_leucophaeus
ENSSFOG00015019264	rad18	88	50.108	ENSMAMG00000023936	rad18	96	49.679	Mastacembelus_armatus
ENSSFOG00015019264	rad18	100	50.489	ENSMZEG00005010577	rad18	93	50.392	Maylandia_zebra
ENSSFOG00015019264	rad18	73	46.154	ENSMGAG00000010131	RAD18	73	43.617	Meleagris_gallopavo
ENSSFOG00015019264	rad18	78	46.361	ENSMAUG00000020642	Rad18	81	44.357	Mesocricetus_auratus
ENSSFOG00015019264	rad18	80	44.444	ENSMICG00000013536	RAD18	74	45.867	Microcebus_murinus
ENSSFOG00015019264	rad18	76	46.175	ENSMOCG00000009114	Rad18	79	44.293	Microtus_ochrogaster
ENSSFOG00015019264	rad18	73	54.595	ENSMMOG00000021793	rad18	97	54.595	Mola_mola
ENSSFOG00015019264	rad18	80	47.273	ENSMODG00000004679	RAD18	74	45.573	Monodelphis_domestica
ENSSFOG00015019264	rad18	76	46.301	MGP_CAROLIEiJ_G0028712	Rad18	98	46.474	Mus_caroli
ENSSFOG00015019264	rad18	76	46.092	ENSMUSG00000030254	Rad18	98	45.570	Mus_musculus
ENSSFOG00015019264	rad18	79	45.455	MGP_PahariEiJ_G0022463	Rad18	98	45.886	Mus_pahari
ENSSFOG00015019264	rad18	76	46.092	MGP_SPRETEiJ_G0029740	Rad18	98	45.253	Mus_spretus
ENSSFOG00015019264	rad18	80	47.409	ENSMPUG00000017063	RAD18	75	46.015	Mustela_putorius_furo
ENSSFOG00015019264	rad18	76	46.011	ENSMLUG00000016494	RAD18	71	47.425	Myotis_lucifugus
ENSSFOG00015019264	rad18	76	47.383	ENSNGAG00000012464	Rad18	88	45.385	Nannospalax_galili
ENSSFOG00015019264	rad18	74	50.270	ENSNBRG00000004794	rad18	97	50.136	Neolamprologus_brichardi
ENSSFOG00015019264	rad18	76	47.326	ENSNLEG00000003789	RAD18	72	45.623	Nomascus_leucogenys
ENSSFOG00015019264	rad18	54	48.507	ENSMEUG00000003444	-	61	47.388	Notamacropus_eugenii
ENSSFOG00015019264	rad18	81	46.115	ENSOPRG00000013856	RAD18	77	46.329	Ochotona_princeps
ENSSFOG00015019264	rad18	64	48.197	ENSODEG00000018158	RAD18	96	45.110	Octodon_degus
ENSSFOG00015019264	rad18	93	54.072	ENSONIG00000018979	rad18	97	53.563	Oreochromis_niloticus
ENSSFOG00015019264	rad18	80	46.770	ENSOCUG00000000013	RAD18	76	45.619	Oryctolagus_cuniculus
ENSSFOG00015019264	rad18	72	53.591	ENSORLG00000029026	rad18	95	52.762	Oryzias_latipes
ENSSFOG00015019264	rad18	80	46.582	ENSOGAG00000001410	RAD18	72	47.185	Otolemur_garnettii
ENSSFOG00015019264	rad18	76	47.594	ENSOARG00000007445	RAD18	71	46.381	Ovis_aries
ENSSFOG00015019264	rad18	80	46.193	ENSPPAG00000035797	RAD18	76	45.000	Pan_paniscus
ENSSFOG00015019264	rad18	79	47.769	ENSPPRG00000004021	RAD18	74	47.769	Panthera_pardus
ENSSFOG00015019264	rad18	79	47.769	ENSPTIG00000008602	RAD18	74	47.769	Panthera_tigris_altaica
ENSSFOG00015019264	rad18	91	43.736	ENSPTRG00000014583	RAD18	83	42.247	Pan_troglodytes
ENSSFOG00015019264	rad18	80	46.547	ENSPANG00000008855	RAD18	76	45.269	Papio_anubis
ENSSFOG00015019264	rad18	82	45.885	ENSPSIG00000006928	RAD18	79	45.137	Pelodiscus_sinensis
ENSSFOG00015019264	rad18	71	55.752	ENSPMGG00000013294	rad18	97	55.457	Periophthalmus_magnuspinnatus
ENSSFOG00015019264	rad18	76	45.553	ENSPEMG00000022129	Rad18	79	43.700	Peromyscus_maniculatus_bairdii
ENSSFOG00015019264	rad18	80	46.717	ENSPCIG00000024872	RAD18	83	43.500	Phascolarctos_cinereus
ENSSFOG00015019264	rad18	72	56.198	ENSPFOG00000002722	rad18	96	56.198	Poecilia_formosa
ENSSFOG00015019264	rad18	76	46.917	ENSPPYG00000013688	RAD18	72	45.623	Pongo_abelii
ENSSFOG00015019264	rad18	76	36.141	ENSPCAG00000008229	RAD18	59	43.902	Procavia_capensis
ENSSFOG00015019264	rad18	76	48.087	ENSPVAG00000012220	RAD18	73	47.541	Pteropus_vampyrus
ENSSFOG00015019264	rad18	100	50.577	ENSPNYG00000006815	rad18	100	50.482	Pundamilia_nyererei
ENSSFOG00015019264	rad18	94	53.205	ENSPNAG00000016082	rad18	97	52.298	Pygocentrus_nattereri
ENSSFOG00015019264	rad18	80	44.987	ENSRNOG00000005907	Rad18	77	43.750	Rattus_norvegicus
ENSSFOG00015019264	rad18	88	42.661	ENSRBIG00000044173	RAD18	84	41.986	Rhinopithecus_bieti
ENSSFOG00015019264	rad18	85	43.448	ENSRROG00000043948	RAD18	84	42.760	Rhinopithecus_roxellana
ENSSFOG00015019264	rad18	80	45.547	ENSSBOG00000008434	-	76	44.192	Saimiri_boliviensis_boliviensis
ENSSFOG00015019264	rad18	79	43.979	ENSSHAG00000012472	-	92	42.932	Sarcophilus_harrisii
ENSSFOG00015019264	rad18	64	53.526	ENSSPUG00000017486	RAD18	98	51.923	Sphenodon_punctatus
ENSSFOG00015019264	rad18	99	50.193	ENSSPAG00000007165	rad18	100	49.807	Stegastes_partitus
ENSSFOG00015019264	rad18	88	45.221	ENSSSCG00000026158	RAD18	84	44.056	Sus_scrofa
ENSSFOG00015019264	rad18	73	46.742	ENSTGUG00000010405	RAD18	78	46.023	Taeniopygia_guttata
ENSSFOG00015019264	rad18	74	52.830	ENSTRUG00000003517	rad18	100	51.752	Takifugu_rubripes
ENSSFOG00015019264	rad18	76	58.011	ENSTNIG00000014625	rad18	100	57.459	Tetraodon_nigroviridis
ENSSFOG00015019264	rad18	80	46.354	ENSTTRG00000005034	RAD18	76	45.337	Tursiops_truncatus
ENSSFOG00015019264	rad18	80	47.668	ENSUMAG00000019279	RAD18	75	46.329	Ursus_maritimus
ENSSFOG00015019264	rad18	76	45.777	ENSVPAG00000002063	RAD18	78	44.355	Vicugna_pacos
ENSSFOG00015019264	rad18	80	47.150	ENSVVUG00000025318	RAD18	78	45.855	Vulpes_vulpes
ENSSFOG00015019264	rad18	74	46.348	ENSXETG00000033878	RAD18	94	46.629	Xenopus_tropicalis
ENSSFOG00015019264	rad18	72	49.727	ENSXCOG00000020018	rad18	94	49.861	Xiphophorus_couchianus
ENSSFOG00015019264	rad18	72	49.861	ENSXMAG00000001516	rad18	94	49.861	Xiphophorus_maculatus