EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019341 (Gene tree)
Gene ID: 108930251
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein with serine-rich domain 1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3259 bases
Position: chrKV410916.1:1897290-1900548
Accession: 108930251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030134	RRM_1	PF00076.22	3.8e-16	1	1
ENSSFOP00015030125	RRM_1	PF00076.22	4.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015030470	-	828	-	ENSSFOP00015030125	275 (aa)	-	-
ENSSFOT00015030480	-	954	XM_018745409	ENSSFOP00015030134	317 (aa)	XP_018600925	-

Gene Model

Click here to download ENSSFOG00015019341's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG
sfm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019341	-	73	74.359	ENSSFOG00015022746	RNPS1	85	73.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019341	-	75	69.295	ENSG00000205937	RNPS1	85	76.987	Homo_sapiens
ENSSFOG00015019341	-	73	78.017	ENSAPOG00000014649	-	83	78.017	Acanthochromis_polyacanthus
ENSSFOG00015019341	-	78	68.699	ENSAPOG00000017310	RNPS1	76	74.167	Acanthochromis_polyacanthus
ENSSFOG00015019341	-	75	69.295	ENSAMEG00000017861	RNPS1	79	76.446	Ailuropoda_melanoleuca
ENSSFOG00015019341	-	77	61.972	ENSACIG00000014367	-	76	73.239	Amphilophus_citrinellus
ENSSFOG00015019341	-	73	68.670	ENSAOCG00000002404	RNPS1	82	74.678	Amphiprion_ocellaris
ENSSFOG00015019341	-	75	67.782	ENSAPEG00000006497	RNPS1	80	74.786	Amphiprion_percula
ENSSFOG00015019341	-	77	73.469	ENSAPEG00000019263	-	79	76.596	Amphiprion_percula
ENSSFOG00015019341	-	73	69.957	ENSATEG00000024267	RNPS1	82	78.970	Anabas_testudineus
ENSSFOG00015019341	-	73	62.687	ENSATEG00000000835	RNPS1	90	74.766	Anabas_testudineus
ENSSFOG00015019341	-	77	56.917	ENSAPLG00000006231	RNPS1	59	87.179	Anas_platyrhynchos
ENSSFOG00015019341	-	72	65.842	ENSACAG00000004088	RNPS1	85	70.952	Anolis_carolinensis
ENSSFOG00015019341	-	75	68.880	ENSANAG00000028802	RNPS1	85	76.569	Aotus_nancymaae
ENSSFOG00015019341	-	78	66.359	ENSANAG00000029802	-	84	74.771	Aotus_nancymaae
ENSSFOG00015019341	-	78	64.400	ENSACLG00000021537	-	87	78.112	Astatotilapia_calliptera
ENSSFOG00015019341	-	78	65.888	ENSACLG00000025942	RNPS1	82	73.276	Astatotilapia_calliptera
ENSSFOG00015019341	-	73	88.614	ENSAMXG00000006330	-	95	73.840	Astyanax_mexicanus
ENSSFOG00015019341	-	77	63.551	ENSBTAG00000009969	RNPS1	77	76.852	Bos_taurus
ENSSFOG00015019341	-	75	69.295	ENSCJAG00000014969	RNPS1	85	76.987	Callithrix_jacchus
ENSSFOG00015019341	-	75	69.295	ENSCAFG00000019397	RNPS1	79	76.446	Canis_familiaris
ENSSFOG00015019341	-	75	69.295	ENSCAFG00020026159	RNPS1	88	74.510	Canis_lupus_dingo
ENSSFOG00015019341	-	73	68.627	ENSTSYG00000031848	-	89	71.429	Carlito_syrichta
ENSSFOG00015019341	-	87	58.776	ENSTSYG00000001629	RNPS1	85	76.987	Carlito_syrichta
ENSSFOG00015019341	-	75	69.295	ENSCAPG00000007731	RNPS1	79	76.446	Cavia_aperea
ENSSFOG00015019341	-	75	69.295	ENSCPOG00000002066	RNPS1	85	76.987	Cavia_porcellus
ENSSFOG00015019341	-	75	68.880	ENSCCAG00000034480	RNPS1	85	76.569	Cebus_capucinus
ENSSFOG00015019341	-	75	69.295	ENSCATG00000013756	RNPS1	85	76.987	Cercocebus_atys
ENSSFOG00015019341	-	83	63.910	ENSCATG00000042361	-	81	70.248	Cercocebus_atys
ENSSFOG00015019341	-	75	69.295	ENSCLAG00000015546	RNPS1	85	76.987	Chinchilla_lanigera
ENSSFOG00015019341	-	85	73.358	ENSCSAG00000005219	-	80	75.732	Chlorocebus_sabaeus
ENSSFOG00015019341	-	75	68.050	ENSCHOG00000004866	RNPS1	79	75.207	Choloepus_hoffmanni
ENSSFOG00015019341	-	77	49.528	ENSCPBG00000000214	RNPS1	74	56.019	Chrysemys_picta_bellii
ENSSFOG00015019341	-	75	69.295	ENSCANG00000041307	RNPS1	85	76.987	Colobus_angolensis_palliatus
ENSSFOG00015019341	-	77	58.636	ENSCANG00000030189	-	91	60.581	Colobus_angolensis_palliatus
ENSSFOG00015019341	-	75	69.295	ENSCGRG00001020431	Rnps1	85	76.987	Cricetulus_griseus_chok1gshd
ENSSFOG00015019341	-	73	65.854	ENSCGRG00000014021	Rnps1	77	76.852	Cricetulus_griseus_crigri
ENSSFOG00015019341	-	74	65.966	ENSCSEG00000015997	RNPS1	81	68.376	Cynoglossus_semilaevis
ENSSFOG00015019341	-	74	76.923	ENSCSEG00000000402	RNPS1	76	77.253	Cynoglossus_semilaevis
ENSSFOG00015019341	-	73	78.818	ENSCVAG00000010868	RNPS1	75	79.812	Cyprinodon_variegatus
ENSSFOG00015019341	-	73	72.103	ENSDARG00000116743	rnps1	82	79.399	Danio_rerio
ENSSFOG00015019341	-	73	72.103	ENSDARG00000100188	RNPS1	82	79.399	Danio_rerio
ENSSFOG00015019341	-	75	69.295	ENSDNOG00000016081	RNPS1	79	76.446	Dasypus_novemcinctus
ENSSFOG00015019341	-	70	58.163	ENSDNOG00000038751	-	98	55.330	Dasypus_novemcinctus
ENSSFOG00015019341	-	75	68.880	ENSDORG00000001755	Rnps1	85	76.569	Dipodomys_ordii
ENSSFOG00015019341	-	75	69.295	ENSEASG00005004862	RNPS1	79	76.446	Equus_asinus_asinus
ENSSFOG00015019341	-	75	64.623	ENSECAG00000023288	RNPS1	77	69.811	Equus_caballus
ENSSFOG00015019341	-	72	65.657	ENSELUG00000015003	RNPS1	75	72.642	Esox_lucius
ENSSFOG00015019341	-	75	69.710	ENSFCAG00000007690	RNPS1	85	77.406	Felis_catus
ENSSFOG00015019341	-	75	71.250	ENSFALG00000004868	RNPS1	85	78.750	Ficedula_albicollis
ENSSFOG00015019341	-	75	69.295	ENSFDAG00000003386	RNPS1	85	76.987	Fukomys_damarensis
ENSSFOG00015019341	-	69	80.208	ENSFHEG00000011705	RNPS1	75	75.701	Fundulus_heteroclitus
ENSSFOG00015019341	-	74	71.130	ENSGALG00000009288	RNPS1	84	78.661	Gallus_gallus
ENSSFOG00015019341	-	73	76.355	ENSGAFG00000005457	RNPS1	75	77.465	Gambusia_affinis
ENSSFOG00015019341	-	73	71.795	ENSGACG00000011261	RNPS1	82	78.632	Gasterosteus_aculeatus
ENSSFOG00015019341	-	73	71.983	ENSGACG00000005641	-	82	74.138	Gasterosteus_aculeatus
ENSSFOG00015019341	-	75	70.539	ENSGAGG00000010452	RNPS1	79	77.686	Gopherus_agassizii
ENSSFOG00015019341	-	77	63.303	ENSGGOG00000026421	-	91	66.527	Gorilla_gorilla
ENSSFOG00015019341	-	75	69.295	ENSGGOG00000014275	RNPS1	85	76.987	Gorilla_gorilla
ENSSFOG00015019341	-	74	67.660	ENSHBUG00000017337	-	82	78.112	Haplochromis_burtoni
ENSSFOG00015019341	-	78	65.888	ENSHBUG00000002494	RNPS1	82	73.276	Haplochromis_burtoni
ENSSFOG00015019341	-	79	62.054	ENSHGLG00000006292	-	87	76.389	Heterocephalus_glaber_female
ENSSFOG00015019341	-	75	69.295	ENSHGLG00000013957	RNPS1	85	76.987	Heterocephalus_glaber_female
ENSSFOG00015019341	-	79	56.306	ENSHGLG00100017879	-	72	63.014	Heterocephalus_glaber_male
ENSSFOG00015019341	-	75	69.295	ENSHGLG00100003539	RNPS1	85	76.987	Heterocephalus_glaber_male
ENSSFOG00015019341	-	75	66.805	ENSHGLG00100001721	-	79	68.182	Heterocephalus_glaber_male
ENSSFOG00015019341	-	79	65.909	ENSHGLG00100011610	-	89	64.545	Heterocephalus_glaber_male
ENSSFOG00015019341	-	81	69.498	ENSHGLG00100015267	-	78	72.685	Heterocephalus_glaber_male
ENSSFOG00015019341	-	73	62.500	ENSHCOG00000002546	-	57	55.479	Hippocampus_comes
ENSSFOG00015019341	-	76	59.600	ENSIPUG00000011746	rnps1	91	72.766	Ictalurus_punctatus
ENSSFOG00015019341	-	73	63.184	ENSJJAG00000010326	-	72	64.186	Jaculus_jaculus
ENSSFOG00015019341	-	73	65.174	ENSJJAG00000019234	-	61	65.888	Jaculus_jaculus
ENSSFOG00015019341	-	75	69.295	ENSJJAG00000015576	-	85	76.987	Jaculus_jaculus
ENSSFOG00015019341	-	73	78.879	ENSKMAG00000009135	RNPS1	82	78.879	Kryptolebias_marmoratus
ENSSFOG00015019341	-	79	61.261	ENSMFAG00000044121	-	76	62.273	Macaca_fascicularis
ENSSFOG00015019341	-	75	69.295	ENSMFAG00000042142	RNPS1	85	76.987	Macaca_fascicularis
ENSSFOG00015019341	-	77	65.888	ENSMMUG00000019238	-	91	69.362	Macaca_mulatta
ENSSFOG00015019341	-	77	68.293	ENSMMUG00000041726	-	85	69.835	Macaca_mulatta
ENSSFOG00015019341	-	77	68.699	ENSMNEG00000024827	-	77	69.863	Macaca_nemestrina
ENSSFOG00015019341	-	75	69.295	ENSMLEG00000036928	RNPS1	85	76.987	Mandrillus_leucophaeus
ENSSFOG00015019341	-	77	64.019	ENSMLEG00000040232	-	91	62.979	Mandrillus_leucophaeus
ENSSFOG00015019341	-	82	71.863	ENSMAMG00000021148	-	81	78.879	Mastacembelus_armatus
ENSSFOG00015019341	-	89	62.151	ENSMAMG00000021609	-	82	76.824	Mastacembelus_armatus
ENSSFOG00015019341	-	78	65.888	ENSMZEG00005012742	RNPS1	82	73.276	Maylandia_zebra
ENSSFOG00015019341	-	73	67.811	ENSMZEG00005006256	-	83	78.017	Maylandia_zebra
ENSSFOG00015019341	-	78	64.840	ENSMGAG00000010042	RNPS1	90	75.342	Meleagris_gallopavo
ENSSFOG00015019341	-	75	69.710	ENSMICG00000031543	RNPS1	85	77.406	Microcebus_murinus
ENSSFOG00015019341	-	75	69.295	ENSMOCG00000003429	Rnps1	85	76.987	Microtus_ochrogaster
ENSSFOG00015019341	-	71	73.894	ENSMMOG00000004680	-	77	73.636	Mola_mola
ENSSFOG00015019341	-	72	70.707	ENSMMOG00000010863	RNPS1	75	73.585	Mola_mola
ENSSFOG00015019341	-	75	68.595	ENSMODG00000015891	RNPS1	79	74.486	Monodelphis_domestica
ENSSFOG00015019341	-	76	70.539	ENSMALG00000013384	-	89	68.050	Monopterus_albus
ENSSFOG00015019341	-	75	69.295	ENSMUSG00000034681	Rnps1	85	76.987	Mus_musculus
ENSSFOG00015019341	-	75	69.295	MGP_PahariEiJ_G0023498	Rnps1	85	76.987	Mus_pahari
ENSSFOG00015019341	-	75	69.295	MGP_SPRETEiJ_G0022092	Rnps1	85	76.987	Mus_spretus
ENSSFOG00015019341	-	75	69.295	ENSMLUG00000016808	RNPS1	79	76.446	Myotis_lucifugus
ENSSFOG00015019341	-	76	68.724	ENSNGAG00000023702	Rnps1	85	76.987	Nannospalax_galili
ENSSFOG00015019341	-	74	75.000	ENSNBRG00000014540	-	84	78.017	Neolamprologus_brichardi
ENSSFOG00015019341	-	77	65.258	ENSNBRG00000023437	RNPS1	76	70.892	Neolamprologus_brichardi
ENSSFOG00015019341	-	78	68.000	ENSNLEG00000009243	RNPS1	87	76.389	Nomascus_leucogenys
ENSSFOG00015019341	-	75	69.710	ENSMEUG00000008882	RNPS1	79	76.860	Notamacropus_eugenii
ENSSFOG00015019341	-	75	69.710	ENSOPRG00000016422	RNPS1	79	76.446	Ochotona_princeps
ENSSFOG00015019341	-	73	67.811	ENSONIG00000019627	-	83	78.017	Oreochromis_niloticus
ENSSFOG00015019341	-	73	76.923	ENSORLG00015011183	RNPS1	85	66.544	Oryzias_latipes_hsok
ENSSFOG00015019341	-	77	65.587	ENSPPAG00000011845	RNPS1	86	72.385	Pan_paniscus
ENSSFOG00015019341	-	76	63.850	ENSPPAG00000037836	-	87	71.981	Pan_paniscus
ENSSFOG00015019341	-	75	69.710	ENSPPRG00000011255	RNPS1	85	77.406	Panthera_pardus
ENSSFOG00015019341	-	75	69.295	ENSPTRG00000031310	RNPS1	85	76.987	Pan_troglodytes
ENSSFOG00015019341	-	77	64.019	ENSPTRG00000046326	-	91	67.234	Pan_troglodytes
ENSSFOG00015019341	-	77	48.598	ENSPANG00000033576	-	89	51.489	Papio_anubis
ENSSFOG00015019341	-	75	69.295	ENSPANG00000015748	RNPS1	85	76.987	Papio_anubis
ENSSFOG00015019341	-	73	96.104	ENSPKIG00000025046	-	73	96.104	Paramormyrops_kingsleyae
ENSSFOG00015019341	-	81	67.050	ENSPSIG00000006048	RNPS1	79	78.512	Pelodiscus_sinensis
ENSSFOG00015019341	-	75	69.295	ENSPEMG00000012797	Rnps1	85	76.987	Peromyscus_maniculatus_bairdii
ENSSFOG00015019341	-	75	69.710	ENSPCIG00000025012	RNPS1	85	77.406	Phascolarctos_cinereus
ENSSFOG00015019341	-	73	77.340	ENSPFOG00000009978	RNPS1	75	78.404	Poecilia_formosa
ENSSFOG00015019341	-	73	77.340	ENSPLAG00000009343	RNPS1	75	78.404	Poecilia_latipinna
ENSSFOG00015019341	-	73	77.340	ENSPMEG00000008552	RNPS1	75	78.404	Poecilia_mexicana
ENSSFOG00015019341	-	73	77.340	ENSPREG00000001843	RNPS1	75	78.404	Poecilia_reticulata
ENSSFOG00015019341	-	75	67.220	ENSPCAG00000004514	RNPS1	79	74.380	Procavia_capensis
ENSSFOG00015019341	-	75	69.710	ENSPCOG00000005478	RNPS1	94	68.936	Propithecus_coquereli
ENSSFOG00015019341	-	75	69.295	ENSPVAG00000005105	RNPS1	79	76.446	Pteropus_vampyrus
ENSSFOG00015019341	-	78	65.888	ENSPNYG00000000585	RNPS1	82	73.276	Pundamilia_nyererei
ENSSFOG00015019341	-	73	83.983	ENSPNAG00000025479	RNPS1	82	83.983	Pygocentrus_nattereri
ENSSFOG00015019341	-	75	69.295	ENSRNOG00000008703	Rnps1	79	76.446	Rattus_norvegicus
ENSSFOG00015019341	-	76	68.333	ENSRNOG00000027239	AABR07037800.1	79	68.050	Rattus_norvegicus
ENSSFOG00015019341	-	74	69.456	ENSRBIG00000038965	-	88	77.178	Rhinopithecus_bieti
ENSSFOG00015019341	-	75	69.295	ENSRROG00000041252	RNPS1	85	76.987	Rhinopithecus_roxellana
ENSSFOG00015019341	-	75	69.295	ENSSBOG00000027927	RNPS1	85	76.987	Saimiri_boliviensis_boliviensis
ENSSFOG00015019341	-	75	69.710	ENSSHAG00000016951	RNPS1	79	76.860	Sarcophilus_harrisii
ENSSFOG00015019341	-	73	74.459	ENSSMAG00000016933	RNPS1	82	76.724	Scophthalmus_maximus
ENSSFOG00015019341	-	73	68.670	ENSSDUG00000011453	RNPS1	82	75.107	Seriola_dumerili
ENSSFOG00015019341	-	74	77.350	ENSSDUG00000006433	-	76	77.682	Seriola_dumerili
ENSSFOG00015019341	-	83	61.739	ENSSLDG00000021341	RNPS1	80	75.566	Seriola_lalandi_dorsalis
ENSSFOG00015019341	-	75	71.369	ENSSPUG00000016588	RNPS1	79	78.512	Sphenodon_punctatus
ENSSFOG00015019341	-	75	69.710	ENSSSCG00000008048	RNPS1	79	76.860	Sus_scrofa
ENSSFOG00015019341	-	75	71.667	ENSTGUG00000003237	RNPS1	85	79.167	Taeniopygia_guttata
ENSSFOG00015019341	-	73	65.957	ENSTRUG00000008602	RNPS1	82	74.043	Takifugu_rubripes
ENSSFOG00015019341	-	74	67.227	ENSTNIG00000007411	-	84	68.067	Tetraodon_nigroviridis
ENSSFOG00015019341	-	73	67.797	ENSTNIG00000009753	RNPS1	81	73.305	Tetraodon_nigroviridis
ENSSFOG00015019341	-	78	70.000	ENSTBEG00000009098	RNPS1	89	76.446	Tupaia_belangeri
ENSSFOG00015019341	-	75	69.295	ENSTTRG00000008220	RNPS1	79	76.446	Tursiops_truncatus
ENSSFOG00015019341	-	75	69.295	ENSUAMG00000004462	RNPS1	89	76.446	Ursus_americanus
ENSSFOG00015019341	-	75	69.295	ENSUMAG00000022327	RNPS1	79	76.446	Ursus_maritimus
ENSSFOG00015019341	-	75	68.465	ENSVPAG00000009976	RNPS1	79	66.529	Vicugna_pacos
ENSSFOG00015019341	-	75	69.295	ENSVVUG00000009244	RNPS1	79	76.446	Vulpes_vulpes
ENSSFOG00015019341	-	73	68.932	ENSXETG00000024439	rnps1	70	75.463	Xenopus_tropicalis
ENSSFOG00015019341	-	73	77.586	ENSXMAG00000004827	RNPS1	82	77.586	Xiphophorus_maculatus