EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015019371 (Gene tree)
Gene ID
108937682
Gene Symbol
puf60a
Alias
fc21a05|wu:fc21a05|wu:fi43a08
Full Name
poly(U)-binding-splicing factor PUF60
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
14776 bases
Position
chrKV411145.1:1605755-1620530
Accession
108937682
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015030218RRM_1PF00076.223.2e-4512
ENSSFOP00015030218RRM_1PF00076.223.2e-4522
ENSSFOP00015030177RRM_1PF00076.224.4e-4512
ENSSFOP00015030177RRM_1PF00076.224.4e-4522
ENSSFOP00015030198RRM_1PF00076.224.8e-4512
ENSSFOP00015030198RRM_1PF00076.224.8e-4522
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015030544-3283XM_018757729ENSSFOP00015030198553 (aa)XP_018613245A0A1W5AJM0
ENSSFOT00015030523-3373XM_018757730ENSSFOP00015030177541 (aa)XP_018613246A0A1W5ABQ1
ENSSFOT00015030565-4066-ENSSFOP00015030218499 (aa)--
Gene Model
Click here to download ENSSFOG00015019371's gene model file
Pathways
Pathway IDPathway NameSource
sfm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019371's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015019371puf60a5735.000ENSSFOG00015019182u2af2b6836.275
ENSSFOG00015019371puf60a9986.922ENSSFOG00015019619puf60b9985.913
ENSSFOG00015019371puf60a6135.294ENSSFOG00015003884-8535.294
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015019371puf60a9886.922ENSG00000179950PUF6010081.868Homo_sapiens
ENSSFOG00015019371puf60a9890.224ENSAPOG00000001713puf60b10084.448Acanthochromis_polyacanthus
ENSSFOG00015019371puf60a9885.111ENSAMEG00000006406PUF609381.703Ailuropoda_melanoleuca
ENSSFOG00015019371puf60a9889.817ENSACIG00000021705puf60b9589.817Amphilophus_citrinellus
ENSSFOG00015019371puf60a9880.041ENSACIG00000003263-9580.488Amphilophus_citrinellus
ENSSFOG00015019371puf60a9886.965ENSAOCG00000015558-10081.374Amphiprion_ocellaris
ENSSFOG00015019371puf60a9890.224ENSAOCG00000005395puf60b9590.224Amphiprion_ocellaris
ENSSFOG00015019371puf60a9884.929ENSAPEG00000011923puf60b10079.204Amphiprion_percula
ENSSFOG00015019371puf60a9977.439ENSAPEG00000001836-9578.947Amphiprion_percula
ENSSFOG00015019371puf60a9885.020ENSATEG00000006303-10079.747Anabas_testudineus
ENSSFOG00015019371puf60a9890.428ENSATEG00000001730puf60b10084.448Anabas_testudineus
ENSSFOG00015019371puf60a9887.928ENSAPLG00000010150PUF6010082.428Anas_platyrhynchos
ENSSFOG00015019371puf60a9887.000ENSACAG00000001645PUF609980.389Anolis_carolinensis
ENSSFOG00015019371puf60a9887.123ENSANAG00000018626PUF6010081.868Aotus_nancymaae
ENSSFOG00015019371puf60a9889.817ENSACLG00000004462puf60b9589.817Astatotilapia_calliptera
ENSSFOG00015019371puf60a9892.400ENSAMXG00000036570puf60a10089.693Astyanax_mexicanus
ENSSFOG00015019371puf60a9879.563ENSAMXG00000041030puf60b10074.503Astyanax_mexicanus
ENSSFOG00015019371puf60a9887.324ENSBTAG00000037493PUF609486.922Bos_taurus
ENSSFOG00015019371puf60a8351.408WBGene00004389rnp-67952.431Caenorhabditis_elegans
ENSSFOG00015019371puf60a9887.123ENSCJAG00000021485PUF6010080.714Callithrix_jacchus
ENSSFOG00015019371puf60a9886.922ENSCAFG00000001400PUF608886.519Canis_familiaris
ENSSFOG00015019371puf60a9887.324ENSCAFG00020018754PUF6010080.893Canis_lupus_dingo
ENSSFOG00015019371puf60a9887.324ENSCHIG00000001618PUF608287.324Capra_hircus
ENSSFOG00015019371puf60a9887.324ENSTSYG00000011912PUF6010082.234Carlito_syrichta
ENSSFOG00015019371puf60a9882.236ENSCPOG00000014613PUF609476.978Cavia_porcellus
ENSSFOG00015019371puf60a9886.922ENSCCAG00000007744PUF6010080.893Cebus_capucinus
ENSSFOG00015019371puf60a9886.922ENSCATG00000035405PUF6010080.536Cercocebus_atys
ENSSFOG00015019371puf60a9887.525ENSCLAG00000009154PUF609381.703Chinchilla_lanigera
ENSSFOG00015019371puf60a9886.922ENSCSAG00000008878PUF6010081.868Chlorocebus_sabaeus
ENSSFOG00015019371puf60a9887.928ENSCPBG00000005595PUF609981.982Chrysemys_picta_bellii
ENSSFOG00015019371puf60a9850.301ENSCING00000008436-8163.492Ciona_intestinalis
ENSSFOG00015019371puf60a6258.951ENSCING00000002156-8358.951Ciona_intestinalis
ENSSFOG00015019371puf60a9854.440ENSCSAVG00000001385-9954.286Ciona_savignyi
ENSSFOG00015019371puf60a7959.072ENSCSAVG00000004765-9548.594Ciona_savignyi
ENSSFOG00015019371puf60a7985.930ENSCANG00000041843PUF6010079.866Colobus_angolensis_palliatus
ENSSFOG00015019371puf60a9887.525ENSCGRG00001017442Puf609381.522Cricetulus_griseus_chok1gshd
ENSSFOG00015019371puf60a9887.525ENSCGRG00000003717Puf609381.884Cricetulus_griseus_crigri
ENSSFOG00015019371puf60a9875.000ENSCSEG00000014845-8578.499Cynoglossus_semilaevis
ENSSFOG00015019371puf60a9889.817ENSCSEG00000019887puf60b9484.239Cynoglossus_semilaevis
ENSSFOG00015019371puf60a9485.563ENSCVAG00000001560-9885.563Cyprinodon_variegatus
ENSSFOG00015019371puf60a9889.613ENSCVAG00000009386puf60b9589.613Cyprinodon_variegatus
ENSSFOG00015019371puf60a9891.165ENSDARG00000032175puf60a10095.502Danio_rerio
ENSSFOG00015019371puf60a9880.119ENSDARG00000001241puf60b10093.701Danio_rerio
ENSSFOG00015019371puf60a9874.597ENSDNOG00000043278PUF608774.194Dasypus_novemcinctus
ENSSFOG00015019371puf60a9887.525ENSDORG00000004585Puf609581.522Dipodomys_ordii
ENSSFOG00015019371puf60a9849.562FBgn0028577hfp9951.332Drosophila_melanogaster
ENSSFOG00015019371puf60a9969.091ENSEBUG00000005470-8668.219Eptatretus_burgeri
ENSSFOG00015019371puf60a9960.642ENSEBUG00000014291puf60b8463.283Eptatretus_burgeri
ENSSFOG00015019371puf60a9887.324ENSEASG00005009695PUF6010080.893Equus_asinus_asinus
ENSSFOG00015019371puf60a9887.324ENSECAG00000024681PUF609881.408Equus_caballus
ENSSFOG00015019371puf60a9893.712ENSELUG00000018443-10087.748Esox_lucius
ENSSFOG00015019371puf60a9886.000ENSELUG00000006507puf60b10080.859Esox_lucius
ENSSFOG00015019371puf60a9887.324ENSFCAG00000001045PUF609586.922Felis_catus
ENSSFOG00015019371puf60a9877.264ENSFALG00000001136PUF609872.875Ficedula_albicollis
ENSSFOG00015019371puf60a9887.324ENSFDAG00000017177PUF609381.703Fukomys_damarensis
ENSSFOG00015019371puf60a9889.817ENSFHEG00000020046puf60b9589.817Fundulus_heteroclitus
ENSSFOG00015019371puf60a9983.936ENSFHEG00000021687PUF6010085.567Fundulus_heteroclitus
ENSSFOG00015019371puf60a9875.152ENSGMOG00000006392puf60b10070.364Gadus_morhua
ENSSFOG00015019371puf60a6391.536ENSGALG00000039901PUF608791.536Gallus_gallus
ENSSFOG00015019371puf60a9889.817ENSGAFG00000021040puf60b9589.817Gambusia_affinis
ENSSFOG00015019371puf60a9983.603ENSGAFG00000004334-9983.570Gambusia_affinis
ENSSFOG00015019371puf60a9878.004ENSGACG00000004717puf60b9973.224Gasterosteus_aculeatus
ENSSFOG00015019371puf60a9873.727ENSGACG00000001484-10069.259Gasterosteus_aculeatus
ENSSFOG00015019371puf60a9887.928ENSGAGG00000013289PUF609281.982Gopherus_agassizii
ENSSFOG00015019371puf60a9886.922ENSGGOG00000004646PUF6010080.536Gorilla_gorilla
ENSSFOG00015019371puf60a9885.540ENSHBUG00000009634-10079.566Haplochromis_burtoni
ENSSFOG00015019371puf60a9889.817ENSHBUG00000015118puf60b9589.817Haplochromis_burtoni
ENSSFOG00015019371puf60a9887.324ENSHGLG00000006111PUF609381.703Heterocephalus_glaber_female
ENSSFOG00015019371puf60a9887.324ENSHGLG00100012362PUF609381.703Heterocephalus_glaber_male
ENSSFOG00015019371puf60a9868.966ENSHCOG00000000378-9963.978Hippocampus_comes
ENSSFOG00015019371puf60a9986.029ENSHCOG00000015541puf60b10082.909Hippocampus_comes
ENSSFOG00015019371puf60a9880.952ENSIPUG00000004660puf60b10076.000Ictalurus_punctatus
ENSSFOG00015019371puf60a9889.157ENSIPUG00000002453puf60a10086.232Ictalurus_punctatus
ENSSFOG00015019371puf60a9887.525ENSSTOG00000025037PUF609481.703Ictidomys_tridecemlineatus
ENSSFOG00015019371puf60a9887.525ENSJJAG00000001076Puf609381.522Jaculus_jaculus
ENSSFOG00015019371puf60a9889.817ENSKMAG00000016745puf60b9589.817Kryptolebias_marmoratus
ENSSFOG00015019371puf60a9881.263ENSKMAG00000010106-10077.331Kryptolebias_marmoratus
ENSSFOG00015019371puf60a9989.610ENSLBEG00000012505puf60b10089.610Labrus_bergylta
ENSSFOG00015019371puf60a7783.924ENSLACG00000005456PUF609982.289Latimeria_chalumnae
ENSSFOG00015019371puf60a9893.075ENSLOCG00000010106puf60b10089.150Lepisosteus_oculatus
ENSSFOG00015019371puf60a9886.519ENSLAFG00000022929PUF609480.797Loxodonta_africana
ENSSFOG00015019371puf60a9886.922ENSMFAG00000043373PUF6010080.536Macaca_fascicularis
ENSSFOG00015019371puf60a9887.123ENSMMUG00000013558PUF6010080.536Macaca_mulatta
ENSSFOG00015019371puf60a9886.922ENSMNEG00000031099PUF6010080.536Macaca_nemestrina
ENSSFOG00015019371puf60a9886.922ENSMLEG00000040009PUF6010081.868Mandrillus_leucophaeus
ENSSFOG00015019371puf60a9889.613ENSMAMG00000010394puf60b10083.456Mastacembelus_armatus
ENSSFOG00015019371puf60a9886.815ENSMAMG00000019476-10080.505Mastacembelus_armatus
ENSSFOG00015019371puf60a9885.743ENSMZEG00005019425-10079.747Maylandia_zebra
ENSSFOG00015019371puf60a9889.817ENSMZEG00005018515puf60b9589.817Maylandia_zebra
ENSSFOG00015019371puf60a9887.928ENSMGAG00000013070PUF609982.162Meleagris_gallopavo
ENSSFOG00015019371puf60a9870.020ENSMAUG00000018549-9469.880Mesocricetus_auratus
ENSSFOG00015019371puf60a6691.343ENSMAUG00000014267-8291.343Mesocricetus_auratus
ENSSFOG00015019371puf60a9887.324ENSMICG00000012226PUF6010080.893Microcebus_murinus
ENSSFOG00015019371puf60a9887.525ENSMOCG00000018780Puf608887.525Microtus_ochrogaster
ENSSFOG00015019371puf60a9478.767ENSMMOG00000018059-9977.854Mola_mola
ENSSFOG00015019371puf60a9890.224ENSMMOG00000004217puf60b9590.020Mola_mola
ENSSFOG00015019371puf60a9886.922ENSMODG00000009161PUF608986.519Monodelphis_domestica
ENSSFOG00015019371puf60a9882.281ENSMALG00000006797puf60b10076.854Monopterus_albus
ENSSFOG00015019371puf60a9885.336ENSMALG00000000200-10080.470Monopterus_albus
ENSSFOG00015019371puf60a9887.726MGP_CAROLIEiJ_G0019910Puf609381.884Mus_caroli
ENSSFOG00015019371puf60a9887.726ENSMUSG00000002524Puf609381.884Mus_musculus
ENSSFOG00015019371puf60a9887.726MGP_PahariEiJ_G0019920Puf609381.884Mus_pahari
ENSSFOG00015019371puf60a9887.726MGP_SPRETEiJ_G0020812Puf609381.884Mus_spretus
ENSSFOG00015019371puf60a9887.123ENSMPUG00000008137PUF608786.720Mustela_putorius_furo
ENSSFOG00015019371puf60a9886.720ENSMLUG00000000238-8886.318Myotis_lucifugus
ENSSFOG00015019371puf60a9881.288ENSMLUG00000013032-9975.583Myotis_lucifugus
ENSSFOG00015019371puf60a9887.525ENSNGAG00000000712Puf6010082.234Nannospalax_galili
ENSSFOG00015019371puf60a8485.398ENSNBRG00000013047puf60b9188.608Neolamprologus_brichardi
ENSSFOG00015019371puf60a9885.743ENSNBRG00000017223-10079.747Neolamprologus_brichardi
ENSSFOG00015019371puf60a9886.922ENSNLEG00000002156PUF609980.901Nomascus_leucogenys
ENSSFOG00015019371puf60a6995.238ENSOPRG00000002147PUF607295.307Ochotona_princeps
ENSSFOG00015019371puf60a9864.329ENSODEG00000015513-9859.313Octodon_degus
ENSSFOG00015019371puf60a7290.625ENSODEG00000014024-9090.625Octodon_degus
ENSSFOG00015019371puf60a9889.817ENSONIG00000006247puf60b9389.817Oreochromis_niloticus
ENSSFOG00015019371puf60a9885.947ENSONIG00000014030-9385.947Oreochromis_niloticus
ENSSFOG00015019371puf60a9671.250ENSOANG00000006962PUF609968.216Ornithorhynchus_anatinus
ENSSFOG00015019371puf60a9883.401ENSORLG00000028655-9483.401Oryzias_latipes
ENSSFOG00015019371puf60a9889.613ENSORLG00000012279puf60b9589.613Oryzias_latipes
ENSSFOG00015019371puf60a9884.082ENSORLG00020018144-9977.978Oryzias_latipes_hni
ENSSFOG00015019371puf60a9889.613ENSORLG00020007333puf609589.613Oryzias_latipes_hni
ENSSFOG00015019371puf60a9884.082ENSORLG00015016833-9484.130Oryzias_latipes_hsok
ENSSFOG00015019371puf60a9889.634ENSORLG00015007718puf60b9589.431Oryzias_latipes_hsok
ENSSFOG00015019371puf60a9886.151ENSOMEG00000022185-9979.242Oryzias_melastigma
ENSSFOG00015019371puf60a9887.959ENSOMEG00000001643puf60b9987.755Oryzias_melastigma
ENSSFOG00015019371puf60a9887.525ENSOGAG00000006259PUF608887.123Otolemur_garnettii
ENSSFOG00015019371puf60a9885.425ENSOARG00000016235PUF609879.235Ovis_aries
ENSSFOG00015019371puf60a9886.922ENSPPAG00000029933PUF6010080.536Pan_paniscus
ENSSFOG00015019371puf60a9887.324ENSPPRG00000003257PUF609586.922Panthera_pardus
ENSSFOG00015019371puf60a9885.312ENSPTIG00000009795PUF6010078.995Panthera_tigris_altaica
ENSSFOG00015019371puf60a9886.922ENSPTRG00000020670PUF6010080.536Pan_troglodytes
ENSSFOG00015019371puf60a9886.922ENSPTRG00000043963-9980.901Pan_troglodytes
ENSSFOG00015019371puf60a9886.922ENSPANG00000021936PUF6010080.536Papio_anubis
ENSSFOG00015019371puf60a9892.668ENSPKIG00000012204puf60b9592.464Paramormyrops_kingsleyae
ENSSFOG00015019371puf60a9897.764ENSPKIG00000004295puf60a9597.764Paramormyrops_kingsleyae
ENSSFOG00015019371puf60a9887.525ENSPSIG00000004679PUF609981.884Pelodiscus_sinensis
ENSSFOG00015019371puf60a9888.057ENSPMGG00000013444puf60b9588.057Periophthalmus_magnuspinnatus
ENSSFOG00015019371puf60a9887.525ENSPEMG00000008820Puf609381.522Peromyscus_maniculatus_bairdii
ENSSFOG00015019371puf60a9887.525ENSPCIG00000020270PUF609882.418Phascolarctos_cinereus
ENSSFOG00015019371puf60a9885.132ENSPFOG00000011118-10079.640Poecilia_formosa
ENSSFOG00015019371puf60a9889.817ENSPFOG00000019217puf60b9981.868Poecilia_formosa
ENSSFOG00015019371puf60a9885.132ENSPLAG00000017025-9279.279Poecilia_latipinna
ENSSFOG00015019371puf60a9889.817ENSPLAG00000010754puf60b9589.817Poecilia_latipinna
ENSSFOG00015019371puf60a9889.817ENSPMEG00000000838puf60b9589.817Poecilia_mexicana
ENSSFOG00015019371puf60a9885.336ENSPMEG00000009767-9279.820Poecilia_mexicana
ENSSFOG00015019371puf60a9988.211ENSPREG00000005440puf60b9888.211Poecilia_reticulata
ENSSFOG00015019371puf60a8280.537ENSPPYG00000018951-8984.399Pongo_abelii
ENSSFOG00015019371puf60a7986.432ENSPCAG00000014837PUF6010080.089Procavia_capensis
ENSSFOG00015019371puf60a9887.525ENSPCOG00000027981PUF609487.123Propithecus_coquereli
ENSSFOG00015019371puf60a9995.570ENSPVAG00000016167PUF608195.570Pteropus_vampyrus
ENSSFOG00015019371puf60a9885.743ENSPNYG00000004273-10079.747Pundamilia_nyererei
ENSSFOG00015019371puf60a9889.817ENSPNYG00000002556puf60b9589.817Pundamilia_nyererei
ENSSFOG00015019371puf60a9879.675ENSPNAG00000019415puf60b9174.270Pygocentrus_nattereri
ENSSFOG00015019371puf60a9890.041ENSPNAG00000019909puf60a9985.793Pygocentrus_nattereri
ENSSFOG00015019371puf60a9887.726ENSRNOG00000009960Puf609381.884Rattus_norvegicus
ENSSFOG00015019371puf60a9886.922ENSRBIG00000035274PUF6010080.536Rhinopithecus_bieti
ENSSFOG00015019371puf60a9886.922ENSRROG00000029360PUF6010080.536Rhinopithecus_roxellana
ENSSFOG00015019371puf60a9885.714ENSSBOG00000027089PUF609880.435Saimiri_boliviensis_boliviensis
ENSSFOG00015019371puf60a8886.517ENSSHAG00000006668PUF608486.517Sarcophilus_harrisii
ENSSFOG00015019371puf60a7093.651ENSSMAG00000016381puf60b7592.069Scophthalmus_maximus
ENSSFOG00015019371puf60a9888.776ENSSDUG00000009935puf60b9988.776Seriola_dumerili
ENSSFOG00015019371puf60a9883.984ENSSDUG00000007048-9978.689Seriola_dumerili
ENSSFOG00015019371puf60a9882.834ENSSLDG00000007366-9583.266Seriola_lalandi_dorsalis
ENSSFOG00015019371puf60a9890.428ENSSLDG00000024011puf60b10084.375Seriola_lalandi_dorsalis
ENSSFOG00015019371puf60a6279.299ENSSPUG00000013518PUF608579.299Sphenodon_punctatus
ENSSFOG00015019371puf60a9885.743ENSSPAG00000020285-9586.558Stegastes_partitus
ENSSFOG00015019371puf60a10086.438ENSSPAG00000012144puf60b10084.559Stegastes_partitus
ENSSFOG00015019371puf60a9887.324ENSSSCG00000038800PUF6010082.105Sus_scrofa
ENSSFOG00015019371puf60a9884.274ENSTGUG00000012797-10080.399Taeniopygia_guttata
ENSSFOG00015019371puf60a9881.874ENSTRUG00000008843-10077.222Takifugu_rubripes
ENSSFOG00015019371puf60a9889.409ENSTRUG00000005420puf60b10083.640Takifugu_rubripes
ENSSFOG00015019371puf60a9883.503ENSTNIG00000003069-9483.096Tetraodon_nigroviridis
ENSSFOG00015019371puf60a9889.409ENSTNIG00000013675puf60b9489.409Tetraodon_nigroviridis
ENSSFOG00015019371puf60a6289.691ENSTBEG00000002751-9789.691Tupaia_belangeri
ENSSFOG00015019371puf60a8469.602ENSTBEG00000001899-10069.886Tupaia_belangeri
ENSSFOG00015019371puf60a9886.117ENSTTRG00000017088PUF6010081.502Tursiops_truncatus
ENSSFOG00015019371puf60a9887.324ENSUAMG00000024917PUF6010080.893Ursus_americanus
ENSSFOG00015019371puf60a9881.891ENSUMAG00000000272PUF609376.812Ursus_maritimus
ENSSFOG00015019371puf60a9887.324ENSVVUG00000022527PUF6010082.234Vulpes_vulpes
ENSSFOG00015019371puf60a9886.922ENSXETG00000012469puf609386.519Xenopus_tropicalis
ENSSFOG00015019371puf60a9886.965ENSXCOG00000012355puf60b9586.965Xiphophorus_couchianus
ENSSFOG00015019371puf60a9889.817ENSXMAG00000001862puf60b9589.817Xiphophorus_maculatus
ENSSFOG00015019371puf60a9882.077ENSXMAG00000010507-9976.364Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us