EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015019429 (Gene tree)
Gene ID: 108920787
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6502 bases
Position: chrKV410804.1:3960556-3967057
Accession: 108920787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030273	SLBP_RNA_bind	PF15247.6	2.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015030620	-	3714	XM_018729836	ENSSFOP00015030273	274 (aa)	XP_018585352	A0A1W4Y174

Gene Model

Click here to download ENSSFOG00015019429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019429	slbp	98	53.650	ENSG00000163950	SLBP	91	55.273	Homo_sapiens
ENSSFOG00015019429	slbp	92	59.245	ENSAPOG00000004953	slbp	93	59.245	Acanthochromis_polyacanthus
ENSSFOG00015019429	slbp	57	70.886	ENSAMEG00000016915	SLBP	93	60.465	Ailuropoda_melanoleuca
ENSSFOG00015019429	slbp	89	62.055	ENSACIG00000022308	slbp	94	62.055	Amphilophus_citrinellus
ENSSFOG00015019429	slbp	92	59.023	ENSAOCG00000024545	slbp	93	59.023	Amphiprion_ocellaris
ENSSFOG00015019429	slbp	92	59.398	ENSAPEG00000017629	slbp	93	59.398	Amphiprion_percula
ENSSFOG00015019429	slbp	92	61.654	ENSATEG00000016358	slbp	93	61.654	Anabas_testudineus
ENSSFOG00015019429	slbp	76	58.879	ENSAPLG00000015989	-	93	59.070	Anas_platyrhynchos
ENSSFOG00015019429	slbp	89	53.696	ENSANAG00000034769	SLBP	86	59.259	Aotus_nancymaae
ENSSFOG00015019429	slbp	89	59.533	ENSACLG00000007036	-	91	59.533	Astatotilapia_calliptera
ENSSFOG00015019429	slbp	90	62.302	ENSAMXG00000014527	slbp	92	62.698	Astyanax_mexicanus
ENSSFOG00015019429	slbp	71	61.538	ENSBTAG00000001328	SLBP	85	57.200	Bos_taurus
ENSSFOG00015019429	slbp	92	52.896	ENSCJAG00000001790	SLBP	86	53.696	Callithrix_jacchus
ENSSFOG00015019429	slbp	89	55.600	ENSCAFG00000015016	SLBP	85	55.600	Canis_familiaris
ENSSFOG00015019429	slbp	89	55.600	ENSCAFG00020012334	SLBP	85	55.600	Canis_lupus_dingo
ENSSFOG00015019429	slbp	71	61.538	ENSCHIG00000019364	SLBP	86	57.200	Capra_hircus
ENSSFOG00015019429	slbp	80	55.157	ENSTSYG00000000376	SLBP	88	57.399	Carlito_syrichta
ENSSFOG00015019429	slbp	63	53.371	ENSCAPG00000016340	SLBP	91	58.101	Cavia_aperea
ENSSFOG00015019429	slbp	78	53.636	ENSCPOG00000000031	SLBP	85	54.365	Cavia_porcellus
ENSSFOG00015019429	slbp	98	53.285	ENSCATG00000029173	SLBP	91	54.909	Cercocebus_atys
ENSSFOG00015019429	slbp	61	62.722	ENSCLAG00000008157	SLBP	87	56.000	Chinchilla_lanigera
ENSSFOG00015019429	slbp	96	42.182	ENSCSAG00000015628	SLBP	89	43.841	Chlorocebus_sabaeus
ENSSFOG00015019429	slbp	89	54.762	ENSCPBG00000000746	SLBP	95	52.313	Chrysemys_picta_bellii
ENSSFOG00015019429	slbp	76	57.277	ENSCANG00000041008	SLBP	93	59.346	Colobus_angolensis_palliatus
ENSSFOG00015019429	slbp	98	51.825	ENSCGRG00001009760	-	91	54.909	Cricetulus_griseus_chok1gshd
ENSSFOG00015019429	slbp	92	52.529	ENSCGRG00001012991	-	90	54.864	Cricetulus_griseus_chok1gshd
ENSSFOG00015019429	slbp	98	51.825	ENSCGRG00000004506	Slbp	91	54.909	Cricetulus_griseus_crigri
ENSSFOG00015019429	slbp	89	60.159	ENSCSEG00000020337	-	91	60.159	Cynoglossus_semilaevis
ENSSFOG00015019429	slbp	95	56.391	ENSCVAG00000019592	-	97	56.391	Cyprinodon_variegatus
ENSSFOG00015019429	slbp	89	60.079	ENSDARG00000100558	slbp	82	60.870	Danio_rerio
ENSSFOG00015019429	slbp	71	57.635	ENSDNOG00000047539	SLBP	87	54.264	Dasypus_novemcinctus
ENSSFOG00015019429	slbp	58	65.409	ENSDORG00000003028	Slbp	92	70.667	Dipodomys_ordii
ENSSFOG00015019429	slbp	77	57.477	ENSETEG00000004641	SLBP	97	57.563	Echinops_telfairi
ENSSFOG00015019429	slbp	67	55.026	ENSEASG00005022714	SLBP	92	59.474	Equus_asinus_asinus
ENSSFOG00015019429	slbp	74	59.314	ENSECAG00000011689	SLBP	63	61.463	Equus_caballus
ENSSFOG00015019429	slbp	99	59.431	ENSELUG00000012854	slbp	99	59.431	Esox_lucius
ENSSFOG00015019429	slbp	59	66.258	ENSFCAG00000000169	SLBP	86	60.648	Felis_catus
ENSSFOG00015019429	slbp	99	51.971	ENSFALG00000010003	-	95	51.971	Ficedula_albicollis
ENSSFOG00015019429	slbp	64	61.714	ENSFDAG00000007592	SLBP	94	55.686	Fukomys_damarensis
ENSSFOG00015019429	slbp	89	57.812	ENSFHEG00000007497	slbp	92	57.812	Fundulus_heteroclitus
ENSSFOG00015019429	slbp	57	71.779	ENSGMOG00000015352	slbp	100	71.779	Gadus_morhua
ENSSFOG00015019429	slbp	89	55.777	ENSGALG00000015712	SLBP	87	55.777	Gallus_gallus
ENSSFOG00015019429	slbp	97	57.509	ENSGAFG00000019577	slbp	98	57.509	Gambusia_affinis
ENSSFOG00015019429	slbp	90	56.126	ENSGACG00000019596	slbp	93	56.126	Gasterosteus_aculeatus
ENSSFOG00015019429	slbp	88	55.328	ENSGAGG00000012096	SLBP	96	55.328	Gopherus_agassizii
ENSSFOG00015019429	slbp	98	53.650	ENSGGOG00000003167	SLBP	91	55.273	Gorilla_gorilla
ENSSFOG00015019429	slbp	89	59.144	ENSHBUG00000003338	-	91	59.144	Haplochromis_burtoni
ENSSFOG00015019429	slbp	66	54.891	ENSHGLG00000008313	-	88	49.398	Heterocephalus_glaber_female
ENSSFOG00015019429	slbp	50	63.768	ENSHGLG00000005955	-	95	55.721	Heterocephalus_glaber_female
ENSSFOG00015019429	slbp	62	58.960	ENSHGLG00000010461	-	89	50.612	Heterocephalus_glaber_female
ENSSFOG00015019429	slbp	62	63.372	ENSHGLG00100014018	-	95	62.687	Heterocephalus_glaber_male
ENSSFOG00015019429	slbp	62	58.960	ENSHGLG00100014906	-	89	49.796	Heterocephalus_glaber_male
ENSSFOG00015019429	slbp	66	55.978	ENSHGLG00100010510	-	88	50.201	Heterocephalus_glaber_male
ENSSFOG00015019429	slbp	99	56.318	ENSHCOG00000013425	slbp	99	56.318	Hippocampus_comes
ENSSFOG00015019429	slbp	73	67.488	ENSIPUG00000016780	slbp	88	61.373	Ictalurus_punctatus
ENSSFOG00015019429	slbp	82	53.043	ENSSTOG00000003262	SLBP	85	56.972	Ictidomys_tridecemlineatus
ENSSFOG00015019429	slbp	99	51.636	ENSJJAG00000020549	-	92	54.710	Jaculus_jaculus
ENSSFOG00015019429	slbp	89	53.012	ENSJJAG00000002394	-	85	56.800	Jaculus_jaculus
ENSSFOG00015019429	slbp	93	55.970	ENSKMAG00000008187	slbp	95	55.970	Kryptolebias_marmoratus
ENSSFOG00015019429	slbp	93	58.015	ENSLBEG00000024709	slbp	94	58.015	Labrus_bergylta
ENSSFOG00015019429	slbp	89	54.510	ENSLACG00000014623	SLBP	88	53.906	Latimeria_chalumnae
ENSSFOG00015019429	slbp	99	65.018	ENSLOCG00000011027	slbp	94	65.018	Lepisosteus_oculatus
ENSSFOG00015019429	slbp	70	63.402	ENSLAFG00000012933	SLBP	90	61.086	Loxodonta_africana
ENSSFOG00015019429	slbp	89	55.422	ENSMFAG00000030130	SLBP	79	55.779	Macaca_fascicularis
ENSSFOG00015019429	slbp	93	53.184	ENSMMUG00000032303	SLBP	89	59.535	Macaca_mulatta
ENSSFOG00015019429	slbp	59	51.765	ENSMNEG00000008082	SLBP	70	54.386	Macaca_nemestrina
ENSSFOG00015019429	slbp	96	50.186	ENSMLEG00000024639	SLBP	94	51.852	Mandrillus_leucophaeus
ENSSFOG00015019429	slbp	89	59.690	ENSMAMG00000001046	-	90	59.690	Mastacembelus_armatus
ENSSFOG00015019429	slbp	89	59.144	ENSMZEG00005017261	-	91	59.144	Maylandia_zebra
ENSSFOG00015019429	slbp	76	59.434	ENSMGAG00000013085	SLBP	93	59.434	Meleagris_gallopavo
ENSSFOG00015019429	slbp	89	55.600	ENSMAUG00000009490	Slbp	85	57.200	Mesocricetus_auratus
ENSSFOG00015019429	slbp	80	53.812	ENSMICG00000014244	SLBP	86	56.481	Microcebus_murinus
ENSSFOG00015019429	slbp	82	58.222	ENSMOCG00000015826	Slbp	94	61.033	Microtus_ochrogaster
ENSSFOG00015019429	slbp	91	55.336	ENSMMOG00000010181	slbp	94	55.336	Mola_mola
ENSSFOG00015019429	slbp	71	59.596	ENSMODG00000004304	SLBP	87	57.083	Monodelphis_domestica
ENSSFOG00015019429	slbp	94	57.143	ENSMALG00000013883	-	71	57.143	Monopterus_albus
ENSSFOG00015019429	slbp	96	52.060	MGP_CAROLIEiJ_G0027117	Slbp	88	61.650	Mus_caroli
ENSSFOG00015019429	slbp	96	52.060	ENSMUSG00000004642	Slbp	89	61.650	Mus_musculus
ENSSFOG00015019429	slbp	96	52.060	MGP_PahariEiJ_G0016901	Slbp	88	61.650	Mus_pahari
ENSSFOG00015019429	slbp	96	52.060	MGP_SPRETEiJ_G0028113	Slbp	89	61.650	Mus_spretus
ENSSFOG00015019429	slbp	64	60.989	ENSMPUG00000011139	SLBP	87	60.989	Mustela_putorius_furo
ENSSFOG00015019429	slbp	61	65.269	ENSMLUG00000004425	SLBP	90	57.919	Myotis_lucifugus
ENSSFOG00015019429	slbp	96	50.936	ENSNGAG00000020799	Slbp	89	53.731	Nannospalax_galili
ENSSFOG00015019429	slbp	81	60.593	ENSNBRG00000006044	-	89	60.593	Neolamprologus_brichardi
ENSSFOG00015019429	slbp	98	52.313	ENSNLEG00000000048	SLBP	86	59.259	Nomascus_leucogenys
ENSSFOG00015019429	slbp	57	64.103	ENSMEUG00000002501	SLBP	99	62.637	Notamacropus_eugenii
ENSSFOG00015019429	slbp	61	63.905	ENSODEG00000012641	SLBP	91	55.894	Octodon_degus
ENSSFOG00015019429	slbp	89	59.533	ENSONIG00000017469	-	91	59.533	Oreochromis_niloticus
ENSSFOG00015019429	slbp	76	59.346	ENSOANG00000014243	SLBP	88	59.346	Ornithorhynchus_anatinus
ENSSFOG00015019429	slbp	98	55.351	ENSORLG00000024887	-	97	55.351	Oryzias_latipes
ENSSFOG00015019429	slbp	98	53.875	ENSORLG00020007798	slbp	97	53.875	Oryzias_latipes_hni
ENSSFOG00015019429	slbp	98	54.613	ENSORLG00015016656	slbp	97	54.613	Oryzias_latipes_hsok
ENSSFOG00015019429	slbp	99	53.957	ENSOMEG00000010818	slbp	93	56.031	Oryzias_melastigma
ENSSFOG00015019429	slbp	99	52.536	ENSOGAG00000009750	SLBP	91	54.152	Otolemur_garnettii
ENSSFOG00015019429	slbp	58	68.125	ENSOARG00000016090	SLBP	93	61.860	Ovis_aries
ENSSFOG00015019429	slbp	98	53.285	ENSPPAG00000033300	SLBP	91	54.909	Pan_paniscus
ENSSFOG00015019429	slbp	59	65.644	ENSPPRG00000016897	SLBP	94	56.972	Panthera_pardus
ENSSFOG00015019429	slbp	98	53.285	ENSPTRG00000015832	SLBP	91	54.909	Pan_troglodytes
ENSSFOG00015019429	slbp	98	51.246	ENSPANG00000004932	SLBP	86	59.259	Papio_anubis
ENSSFOG00015019429	slbp	97	68.030	ENSPKIG00000006183	slbp	95	68.116	Paramormyrops_kingsleyae
ENSSFOG00015019429	slbp	86	53.975	ENSPMGG00000017684	-	94	60.094	Periophthalmus_magnuspinnatus
ENSSFOG00015019429	slbp	89	53.815	ENSPEMG00000018369	Slbp	85	57.200	Peromyscus_maniculatus_bairdii
ENSSFOG00015019429	slbp	71	56.250	ENSPCIG00000013575	SLBP	72	53.232	Phascolarctos_cinereus
ENSSFOG00015019429	slbp	97	56.410	ENSPFOG00000000462	slbp	98	56.410	Poecilia_formosa
ENSSFOG00015019429	slbp	97	57.143	ENSPLAG00000008300	slbp	98	57.143	Poecilia_latipinna
ENSSFOG00015019429	slbp	97	56.410	ENSPMEG00000020807	slbp	98	56.410	Poecilia_mexicana
ENSSFOG00015019429	slbp	97	56.777	ENSPREG00000004561	slbp	98	56.777	Poecilia_reticulata
ENSSFOG00015019429	slbp	98	53.650	ENSPPYG00000014529	SLBP	91	55.273	Pongo_abelii
ENSSFOG00015019429	slbp	80	54.260	ENSPCOG00000017399	SLBP	86	56.944	Propithecus_coquereli
ENSSFOG00015019429	slbp	89	51.406	ENSPVAG00000002807	SLBP	85	54.800	Pteropus_vampyrus
ENSSFOG00015019429	slbp	89	59.144	ENSPNYG00000005451	-	91	59.144	Pundamilia_nyererei
ENSSFOG00015019429	slbp	97	61.624	ENSPNAG00000018503	slbp	98	61.172	Pygocentrus_nattereri
ENSSFOG00015019429	slbp	98	51.825	ENSRNOG00000037162	Slbp	91	54.909	Rattus_norvegicus
ENSSFOG00015019429	slbp	98	53.285	ENSRBIG00000039159	SLBP	91	54.909	Rhinopithecus_bieti
ENSSFOG00015019429	slbp	95	53.759	ENSRROG00000030081	SLBP	93	55.797	Rhinopithecus_roxellana
ENSSFOG00015019429	slbp	67	55.556	ENSSBOG00000033897	SLBP	92	57.895	Saimiri_boliviensis_boliviensis
ENSSFOG00015019429	slbp	71	56.398	ENSSHAG00000013939	SLBP	84	52.471	Sarcophilus_harrisii
ENSSFOG00015019429	slbp	94	56.777	ENSSMAG00000016028	-	96	56.777	Scophthalmus_maximus
ENSSFOG00015019429	slbp	89	61.265	ENSSDUG00000000855	-	91	61.265	Seriola_dumerili
ENSSFOG00015019429	slbp	51	64.828	ENSSLDG00000022893	-	99	58.434	Seriola_lalandi_dorsalis
ENSSFOG00015019429	slbp	75	45.794	ENSSLDG00000007554	-	67	45.794	Seriola_lalandi_dorsalis
ENSSFOG00015019429	slbp	91	51.969	ENSSPUG00000016007	SLBP	91	52.362	Sphenodon_punctatus
ENSSFOG00015019429	slbp	89	60.392	ENSSPAG00000004021	slbp	90	60.392	Stegastes_partitus
ENSSFOG00015019429	slbp	71	62.755	ENSSSCG00000008676	SLBP	85	58.167	Sus_scrofa
ENSSFOG00015019429	slbp	89	53.200	ENSTGUG00000010626	-	92	54.400	Taeniopygia_guttata
ENSSFOG00015019429	slbp	50	52.667	ENSTGUG00000010625	-	77	51.250	Taeniopygia_guttata
ENSSFOG00015019429	slbp	90	59.289	ENSTRUG00000000688	slbp	91	59.289	Takifugu_rubripes
ENSSFOG00015019429	slbp	89	56.680	ENSTNIG00000000484	-	98	56.680	Tetraodon_nigroviridis
ENSSFOG00015019429	slbp	50	71.111	ENSTBEG00000004085	SLBP	92	34.137	Tupaia_belangeri
ENSSFOG00015019429	slbp	57	67.949	ENSTTRG00000010901	-	93	59.813	Tursiops_truncatus
ENSSFOG00015019429	slbp	57	65.605	ENSTTRG00000004010	-	99	60.989	Tursiops_truncatus
ENSSFOG00015019429	slbp	70	64.249	ENSUAMG00000012990	SLBP	85	56.800	Ursus_americanus
ENSSFOG00015019429	slbp	89	55.200	ENSVVUG00000015578	-	85	55.200	Vulpes_vulpes
ENSSFOG00015019429	slbp	92	51.163	ENSXETG00000003876	slbp	90	51.969	Xenopus_tropicalis
ENSSFOG00015019429	slbp	83	60.338	ENSXCOG00000008275	slbp	89	60.338	Xiphophorus_couchianus
ENSSFOG00015019429	slbp	97	57.143	ENSXMAG00000001331	-	97	57.143	Xiphophorus_maculatus