EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015019444 (Gene tree)
Gene ID: 108935190
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4544 bases
Position: chrKV410795.1:6402790-6407333
Accession: 108935190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030297	Ribosomal_S18	PF01084.20	7.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015030644	-	3100	XM_018753597	ENSSFOP00015030297	136 (aa)	XP_018609113	A0A1W5A732

Gene Model

Click here to download ENSSFOG00015019444's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019444	mrps18c	81	72.727	ENSAPOG00000019045	mrps18c	84	72.727	Acanthochromis_polyacanthus
ENSSFOG00015019444	mrps18c	65	73.034	ENSACIG00000020253	mrps18c	88	73.034	Amphilophus_citrinellus
ENSSFOG00015019444	mrps18c	81	69.091	ENSAOCG00000014338	mrps18c	84	69.091	Amphiprion_ocellaris
ENSSFOG00015019444	mrps18c	64	81.609	ENSAPEG00000023068	-	82	81.609	Amphiprion_percula
ENSSFOG00015019444	mrps18c	81	69.091	ENSAPEG00000022956	mrps18c	84	69.091	Amphiprion_percula
ENSSFOG00015019444	mrps18c	100	62.500	ENSATEG00000023417	mrps18c	100	62.500	Anabas_testudineus
ENSSFOG00015019444	mrps18c	66	71.111	ENSAPLG00000012544	-	87	71.111	Anas_platyrhynchos
ENSSFOG00015019444	mrps18c	67	78.022	ENSACLG00000010521	mrps18c	89	78.022	Astatotilapia_calliptera
ENSSFOG00015019444	mrps18c	68	79.348	ENSAMXG00000012238	mrps18c	93	79.348	Astyanax_mexicanus
ENSSFOG00015019444	mrps18c	88	60.000	ENSCPBG00000007783	-	74	60.000	Chrysemys_picta_bellii
ENSSFOG00015019444	mrps18c	76	64.762	ENSCSEG00000000711	mrps18c	74	64.762	Cynoglossus_semilaevis
ENSSFOG00015019444	mrps18c	79	63.889	ENSCVAG00000020169	mrps18c	83	63.889	Cyprinodon_variegatus
ENSSFOG00015019444	mrps18c	80	72.477	ENSDARG00000069624	mrps18c	80	72.477	Danio_rerio
ENSSFOG00015019444	mrps18c	100	62.500	ENSELUG00000024603	mrps18c	100	62.500	Esox_lucius
ENSSFOG00015019444	mrps18c	100	60.294	ENSFHEG00000015550	mrps18c	95	60.294	Fundulus_heteroclitus
ENSSFOG00015019444	mrps18c	100	60.294	ENSFHEG00000018752	-	100	60.294	Fundulus_heteroclitus
ENSSFOG00015019444	mrps18c	72	69.388	ENSGALG00000023191	MRPS18C	68	69.388	Gallus_gallus
ENSSFOG00015019444	mrps18c	93	62.308	ENSGAFG00000008048	mrps18c	83	62.308	Gambusia_affinis
ENSSFOG00015019444	mrps18c	79	66.667	ENSGAGG00000015144	-	76	66.667	Gopherus_agassizii
ENSSFOG00015019444	mrps18c	93	61.538	ENSHBUG00000002008	mrps18c	100	61.538	Haplochromis_burtoni
ENSSFOG00015019444	mrps18c	67	76.923	ENSHCOG00000013161	mrps18c	69	76.923	Hippocampus_comes
ENSSFOG00015019444	mrps18c	68	77.174	ENSIPUG00000003783	mrps18c	89	77.174	Ictalurus_punctatus
ENSSFOG00015019444	mrps18c	93	63.846	ENSKMAG00000016467	mrps18c	100	63.846	Kryptolebias_marmoratus
ENSSFOG00015019444	mrps18c	100	63.971	ENSLBEG00000019174	mrps18c	100	63.971	Labrus_bergylta
ENSSFOG00015019444	mrps18c	100	63.971	ENSLBEG00000021861	mrps18c	100	63.971	Labrus_bergylta
ENSSFOG00015019444	mrps18c	79	71.028	ENSLACG00000011243	mrps18c	84	71.028	Latimeria_chalumnae
ENSSFOG00015019444	mrps18c	100	62.774	ENSLOCG00000012115	mrps18c	100	62.774	Lepisosteus_oculatus
ENSSFOG00015019444	mrps18c	100	56.618	ENSMAMG00000012386	mrps18c	100	56.618	Mastacembelus_armatus
ENSSFOG00015019444	mrps18c	93	61.538	ENSMZEG00005023278	mrps18c	100	61.538	Maylandia_zebra
ENSSFOG00015019444	mrps18c	67	76.923	ENSMMOG00000011316	mrps18c	69	76.923	Mola_mola
ENSSFOG00015019444	mrps18c	93	61.538	ENSNBRG00000006182	mrps18c	100	61.538	Neolamprologus_brichardi
ENSSFOG00015019444	mrps18c	66	72.222	ENSMEUG00000010972	-	71	72.222	Notamacropus_eugenii
ENSSFOG00015019444	mrps18c	93	61.538	ENSONIG00000012527	mrps18c	97	73.469	Oreochromis_niloticus
ENSSFOG00015019444	mrps18c	81	65.455	ENSORLG00015006869	mrps18c	84	65.455	Oryzias_latipes_hsok
ENSSFOG00015019444	mrps18c	65	71.910	ENSOMEG00000005009	mrps18c	86	71.910	Oryzias_melastigma
ENSSFOG00015019444	mrps18c	100	72.263	ENSPKIG00000021736	mrps18c	100	72.263	Paramormyrops_kingsleyae
ENSSFOG00015019444	mrps18c	66	75.556	ENSPMGG00000002991	mrps18c	91	75.556	Periophthalmus_magnuspinnatus
ENSSFOG00015019444	mrps18c	93	62.308	ENSPFOG00000002351	mrps18c	83	62.308	Poecilia_formosa
ENSSFOG00015019444	mrps18c	93	62.308	ENSPLAG00000015187	mrps18c	100	62.308	Poecilia_latipinna
ENSSFOG00015019444	mrps18c	93	62.308	ENSPMEG00000014488	mrps18c	83	62.308	Poecilia_mexicana
ENSSFOG00015019444	mrps18c	61	77.108	ENSPREG00000012593	mrps18c	85	77.108	Poecilia_reticulata
ENSSFOG00015019444	mrps18c	93	60.769	ENSPNYG00000010654	mrps18c	100	60.769	Pundamilia_nyererei
ENSSFOG00015019444	mrps18c	91	58.268	ENSPNAG00000009350	mrps18c	87	72.043	Pygocentrus_nattereri
ENSSFOG00015019444	mrps18c	100	61.765	ENSSDUG00000015676	mrps18c	100	61.765	Seriola_dumerili
ENSSFOG00015019444	mrps18c	81	65.833	ENSSLDG00000002034	mrps18c	91	65.833	Seriola_lalandi_dorsalis
ENSSFOG00015019444	mrps18c	78	61.321	ENSSPUG00000013990	-	77	61.321	Sphenodon_punctatus
ENSSFOG00015019444	mrps18c	80	68.807	ENSSPAG00000008687	mrps18c	84	68.807	Stegastes_partitus
ENSSFOG00015019444	mrps18c	87	61.157	ENSTRUG00000024403	mrps18c	93	61.157	Takifugu_rubripes
ENSSFOG00015019444	mrps18c	88	63.934	ENSTNIG00000005674	mrps18c	94	63.934	Tetraodon_nigroviridis
ENSSFOG00015019444	mrps18c	76	63.393	ENSXETG00000027597	mrps18c	85	63.393	Xenopus_tropicalis
ENSSFOG00015019444	mrps18c	100	56.618	ENSXCOG00000016208	mrps18c	89	76.404	Xiphophorus_couchianus
ENSSFOG00015019444	mrps18c	100	61.151	ENSXMAG00000012555	mrps18c	88	61.151	Xiphophorus_maculatus