EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019645 (Gene tree)
Gene ID: 108923364
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 5-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 13260 bases
Position: chrKV410824.1:5536473-5549732
Accession: 108923364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030707	zf-RanBP	PF00641.18	4.8e-09	1	1
ENSSFOP00015030661	zf-RanBP	PF00641.18	1e-08	1	1
ENSSFOP00015030707	RRM_1	PF00076.22	6.9e-15	1	2
ENSSFOP00015030707	RRM_1	PF00076.22	6.9e-15	2	2
ENSSFOP00015030661	RRM_1	PF00076.22	1e-14	1	2
ENSSFOP00015030661	RRM_1	PF00076.22	1e-14	2	2
ENSSFOP00015030707	G-patch	PF01585.23	1.6e-17	1	1
ENSSFOP00015030661	G-patch	PF01585.23	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031055	-	2277	-	ENSSFOP00015030707	758 (aa)	-	-
ENSSFOT00015031009	-	3530	XM_018734043	ENSSFOP00015030661	850 (aa)	XP_018589559	-

Gene Model

Click here to download ENSSFOG00015019645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019645	-	81	55.457	ENSSFOG00015010701	rbm10	77	46.096
ENSSFOG00015019645	-	96	80.488	ENSSFOG00015019052	rbm5	94	76.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019645	-	100	65.691	ENSG00000003756	RBM5	100	66.981	Homo_sapiens
ENSSFOG00015019645	-	100	71.396	ENSAPOG00000016625	rbm5	100	69.275	Acanthochromis_polyacanthus
ENSSFOG00015019645	-	99	72.193	ENSAPOG00000006011	-	100	67.488	Acanthochromis_polyacanthus
ENSSFOG00015019645	-	100	65.105	ENSAMEG00000012005	RBM5	100	64.269	Ailuropoda_melanoleuca
ENSSFOG00015019645	-	99	62.911	ENSACIG00000021310	-	99	63.118	Amphilophus_citrinellus
ENSSFOG00015019645	-	74	73.274	ENSACIG00000007571	rbm5	97	85.526	Amphilophus_citrinellus
ENSSFOG00015019645	-	100	70.608	ENSAOCG00000002880	rbm5	100	69.575	Amphiprion_ocellaris
ENSSFOG00015019645	-	99	65.366	ENSAOCG00000017312	-	99	65.062	Amphiprion_ocellaris
ENSSFOG00015019645	-	91	69.192	ENSAPEG00000011862	rbm5	92	67.471	Amphiprion_percula
ENSSFOG00015019645	-	99	72.000	ENSAPEG00000018222	RBM5	100	67.606	Amphiprion_percula
ENSSFOG00015019645	-	100	70.819	ENSATEG00000024663	rbm5	100	70.242	Anabas_testudineus
ENSSFOG00015019645	-	99	71.026	ENSATEG00000003838	-	100	68.545	Anabas_testudineus
ENSSFOG00015019645	-	94	65.169	ENSAPLG00000011176	RBM5	99	65.365	Anas_platyrhynchos
ENSSFOG00015019645	-	100	63.206	ENSACAG00000008580	RBM5	100	61.257	Anolis_carolinensis
ENSSFOG00015019645	-	100	65.574	ENSANAG00000025199	RBM5	100	64.385	Aotus_nancymaae
ENSSFOG00015019645	-	89	82.500	ENSACLG00000024198	RBM5	99	80.952	Astatotilapia_calliptera
ENSSFOG00015019645	-	99	76.550	ENSACLG00000012748	rbm5	99	75.741	Astatotilapia_calliptera
ENSSFOG00015019645	-	87	79.835	ENSAMXG00000008146	rbm5	99	79.835	Astyanax_mexicanus
ENSSFOG00015019645	-	100	64.988	ENSBTAG00000006330	RBM5	100	64.153	Bos_taurus
ENSSFOG00015019645	-	100	65.457	ENSCJAG00000004740	RBM5	100	64.269	Callithrix_jacchus
ENSSFOG00015019645	-	100	65.222	ENSCAFG00000010866	RBM5	100	64.385	Canis_familiaris
ENSSFOG00015019645	-	100	65.222	ENSCAFG00020022126	RBM5	100	64.385	Canis_lupus_dingo
ENSSFOG00015019645	-	100	65.457	ENSCHIG00000018435	RBM5	100	64.269	Capra_hircus
ENSSFOG00015019645	-	86	64.130	ENSTSYG00000004158	RBM5	100	62.366	Carlito_syrichta
ENSSFOG00015019645	-	99	54.801	ENSCAPG00000013495	RBM5	99	69.373	Cavia_aperea
ENSSFOG00015019645	-	100	65.574	ENSCPOG00000008151	RBM5	100	64.501	Cavia_porcellus
ENSSFOG00015019645	-	99	65.489	ENSCCAG00000026401	RBM5	100	63.437	Cebus_capucinus
ENSSFOG00015019645	-	100	65.574	ENSCATG00000041038	RBM5	100	64.385	Cercocebus_atys
ENSSFOG00015019645	-	100	66.042	ENSCLAG00000007873	RBM5	100	64.733	Chinchilla_lanigera
ENSSFOG00015019645	-	100	65.574	ENSCSAG00000014401	RBM5	100	64.385	Chlorocebus_sabaeus
ENSSFOG00015019645	-	76	68.846	ENSCHOG00000009429	RBM5	85	57.244	Choloepus_hoffmanni
ENSSFOG00015019645	-	100	61.309	ENSCPBG00000002406	RBM5	100	62.785	Chrysemys_picta_bellii
ENSSFOG00015019645	-	100	64.052	ENSCANG00000031250	RBM5	100	63.341	Colobus_angolensis_palliatus
ENSSFOG00015019645	-	100	64.052	ENSCGRG00001010543	Rbm5	100	64.153	Cricetulus_griseus_chok1gshd
ENSSFOG00015019645	-	100	64.052	ENSCGRG00000008475	Rbm5	100	64.153	Cricetulus_griseus_crigri
ENSSFOG00015019645	-	94	75.610	ENSCSEG00000000596	rbm5	96	75.068	Cynoglossus_semilaevis
ENSSFOG00015019645	-	100	70.196	ENSCVAG00000005655	rbm5	100	68.966	Cyprinodon_variegatus
ENSSFOG00015019645	-	100	61.124	ENSDARG00000098280	rbm5	100	70.492	Danio_rerio
ENSSFOG00015019645	-	100	65.457	ENSDNOG00000011756	RBM5	100	64.269	Dasypus_novemcinctus
ENSSFOG00015019645	-	100	65.808	ENSDORG00000007692	Rbm5	100	64.269	Dipodomys_ordii
ENSSFOG00015019645	-	92	63.071	ENSETEG00000012773	RBM5	93	60.222	Echinops_telfairi
ENSSFOG00015019645	-	94	48.974	ENSEBUG00000017034	rbm5	87	50.640	Eptatretus_burgeri
ENSSFOG00015019645	-	100	65.574	ENSEASG00005011835	RBM5	100	64.385	Equus_asinus_asinus
ENSSFOG00015019645	-	100	65.574	ENSECAG00000020447	RBM5	100	64.385	Equus_caballus
ENSSFOG00015019645	-	86	73.134	ENSEEUG00000005943	RBM5	87	73.134	Erinaceus_europaeus
ENSSFOG00015019645	-	100	72.402	ENSELUG00000022467	rbm5	100	71.016	Esox_lucius
ENSSFOG00015019645	-	100	65.574	ENSFCAG00000014639	RBM5	100	64.269	Felis_catus
ENSSFOG00015019645	-	99	62.471	ENSFALG00000008828	RBM5	83	65.239	Ficedula_albicollis
ENSSFOG00015019645	-	100	64.202	ENSFDAG00000001897	RBM5	100	62.877	Fukomys_damarensis
ENSSFOG00015019645	-	100	70.405	ENSFHEG00000015954	rbm5	100	76.190	Fundulus_heteroclitus
ENSSFOG00015019645	-	92	66.667	ENSGMOG00000007810	-	90	64.078	Gadus_morhua
ENSSFOG00015019645	-	99	68.035	ENSGMOG00000016224	rbm5	100	66.045	Gadus_morhua
ENSSFOG00015019645	-	93	65.743	ENSGALG00000039288	RBM5	83	65.365	Gallus_gallus
ENSSFOG00015019645	-	99	74.797	ENSGAFG00000010690	rbm5	99	69.531	Gambusia_affinis
ENSSFOG00015019645	-	100	69.338	ENSGACG00000010469	rbm5	100	68.765	Gasterosteus_aculeatus
ENSSFOG00015019645	-	100	64.808	ENSGACG00000000858	-	100	62.950	Gasterosteus_aculeatus
ENSSFOG00015019645	-	96	63.625	ENSGAGG00000007935	RBM5	99	62.291	Gopherus_agassizii
ENSSFOG00015019645	-	100	65.457	ENSGGOG00000014490	RBM5	100	64.269	Gorilla_gorilla
ENSSFOG00015019645	-	89	82.500	ENSHBUG00000011901	-	99	80.952	Haplochromis_burtoni
ENSSFOG00015019645	-	99	76.280	ENSHBUG00000001941	rbm5	99	75.472	Haplochromis_burtoni
ENSSFOG00015019645	-	100	65.574	ENSHGLG00000014844	RBM5	100	64.501	Heterocephalus_glaber_female
ENSSFOG00015019645	-	100	65.691	ENSHGLG00100010739	RBM5	100	64.617	Heterocephalus_glaber_male
ENSSFOG00015019645	-	96	68.478	ENSHCOG00000017110	rbm5	99	68.478	Hippocampus_comes
ENSSFOG00015019645	-	100	58.129	ENSHCOG00000004536	-	100	57.901	Hippocampus_comes
ENSSFOG00015019645	-	100	69.849	ENSIPUG00000000640	rbm5	100	69.919	Ictalurus_punctatus
ENSSFOG00015019645	-	100	66.042	ENSSTOG00000013856	RBM5	100	64.617	Ictidomys_tridecemlineatus
ENSSFOG00015019645	-	100	65.691	ENSJJAG00000008844	Rbm5	100	64.385	Jaculus_jaculus
ENSSFOG00015019645	-	100	70.486	ENSKMAG00000006663	rbm5	100	68.946	Kryptolebias_marmoratus
ENSSFOG00015019645	-	95	77.568	ENSLBEG00000020858	rbm5	100	69.001	Labrus_bergylta
ENSSFOG00015019645	-	72	55.674	ENSLBEG00000002522	-	88	66.312	Labrus_bergylta
ENSSFOG00015019645	-	99	66.931	ENSLBEG00000010877	-	94	63.658	Labrus_bergylta
ENSSFOG00015019645	-	96	74.659	ENSLACG00000016572	RBM5	100	67.757	Latimeria_chalumnae
ENSSFOG00015019645	-	100	76.163	ENSLOCG00000010774	rbm5	100	74.461	Lepisosteus_oculatus
ENSSFOG00015019645	-	100	64.747	ENSLAFG00000006733	RBM5	100	64.005	Loxodonta_africana
ENSSFOG00015019645	-	100	65.574	ENSMFAG00000031609	RBM5	100	64.385	Macaca_fascicularis
ENSSFOG00015019645	-	99	65.489	ENSMMUG00000004921	RBM5	99	64.294	Macaca_mulatta
ENSSFOG00015019645	-	100	65.457	ENSMNEG00000044394	RBM5	100	64.269	Macaca_nemestrina
ENSSFOG00015019645	-	100	64.569	ENSMLEG00000034689	RBM5	100	64.211	Mandrillus_leucophaeus
ENSSFOG00015019645	-	100	72.905	ENSMAMG00000017277	rbm5	99	78.571	Mastacembelus_armatus
ENSSFOG00015019645	-	100	68.538	ENSMAMG00000023948	-	99	66.284	Mastacembelus_armatus
ENSSFOG00015019645	-	99	76.550	ENSMZEG00005015328	rbm5	99	75.741	Maylandia_zebra
ENSSFOG00015019645	-	100	63.380	ENSMZEG00005010035	-	100	62.456	Maylandia_zebra
ENSSFOG00015019645	-	93	65.322	ENSMGAG00000003972	RBM5	100	65.322	Meleagris_gallopavo
ENSSFOG00015019645	-	99	65.294	ENSMAUG00000020572	Rbm5	98	63.944	Mesocricetus_auratus
ENSSFOG00015019645	-	100	65.457	ENSMICG00000016179	RBM5	100	64.269	Microcebus_murinus
ENSSFOG00015019645	-	100	64.286	ENSMOCG00000017479	Rbm5	100	64.269	Microtus_ochrogaster
ENSSFOG00015019645	-	99	56.384	ENSMMOG00000021804	-	99	54.397	Mola_mola
ENSSFOG00015019645	-	100	61.836	ENSMMOG00000015342	rbm5	100	61.947	Mola_mola
ENSSFOG00015019645	-	100	65.925	ENSMODG00000012301	RBM5	100	64.591	Monodelphis_domestica
ENSSFOG00015019645	-	100	65.965	ENSMALG00000016769	-	100	65.299	Monopterus_albus
ENSSFOG00015019645	-	99	68.539	ENSMALG00000000609	rbm5	99	67.041	Monopterus_albus
ENSSFOG00015019645	-	100	63.232	MGP_CAROLIEiJ_G0032660	Rbm5	100	67.589	Mus_caroli
ENSSFOG00015019645	-	100	63.349	ENSMUSG00000032580	Rbm5	100	67.589	Mus_musculus
ENSSFOG00015019645	-	100	63.466	MGP_PahariEiJ_G0015528	Rbm5	100	67.589	Mus_pahari
ENSSFOG00015019645	-	100	63.349	MGP_SPRETEiJ_G0033805	Rbm5	100	67.589	Mus_spretus
ENSSFOG00015019645	-	100	65.457	ENSMLUG00000007875	RBM5	100	64.269	Myotis_lucifugus
ENSSFOG00015019645	-	100	64.630	ENSNGAG00000011777	Rbm5	100	64.019	Nannospalax_galili
ENSSFOG00015019645	-	99	76.550	ENSNBRG00000018097	rbm5	99	75.741	Neolamprologus_brichardi
ENSSFOG00015019645	-	98	64.405	ENSNBRG00000004400	RBM5	99	63.380	Neolamprologus_brichardi
ENSSFOG00015019645	-	100	65.574	ENSNLEG00000006943	RBM5	100	64.385	Nomascus_leucogenys
ENSSFOG00015019645	-	99	61.675	ENSMEUG00000012994	RBM5	100	60.279	Notamacropus_eugenii
ENSSFOG00015019645	-	92	63.359	ENSOPRG00000015154	RBM5	93	62.125	Ochotona_princeps
ENSSFOG00015019645	-	100	63.232	ENSODEG00000019111	-	100	62.061	Octodon_degus
ENSSFOG00015019645	-	100	65.574	ENSODEG00000016254	-	100	64.385	Octodon_degus
ENSSFOG00015019645	-	99	76.550	ENSONIG00000004107	rbm5	99	75.472	Oreochromis_niloticus
ENSSFOG00015019645	-	100	64.554	ENSONIG00000019007	RBM5	100	63.860	Oreochromis_niloticus
ENSSFOG00015019645	-	88	66.135	ENSOANG00000006557	RBM5	100	64.636	Ornithorhynchus_anatinus
ENSSFOG00015019645	-	100	64.395	ENSOCUG00000011652	RBM5	100	63.573	Oryctolagus_cuniculus
ENSSFOG00015019645	-	95	69.988	ENSORLG00000003369	rbm5	99	69.502	Oryzias_latipes
ENSSFOG00015019645	-	100	60.093	ENSORLG00000001053	-	100	57.714	Oryzias_latipes
ENSSFOG00015019645	-	96	59.486	ENSORLG00020006782	-	98	56.988	Oryzias_latipes_hni
ENSSFOG00015019645	-	100	70.186	ENSORLG00020021744	rbm5	100	68.677	Oryzias_latipes_hni
ENSSFOG00015019645	-	100	70.650	ENSORLG00015018379	rbm5	99	78.571	Oryzias_latipes_hsok
ENSSFOG00015019645	-	96	59.486	ENSORLG00015002854	-	98	57.126	Oryzias_latipes_hsok
ENSSFOG00015019645	-	68	69.192	ENSOMEG00000010653	-	90	69.192	Oryzias_melastigma
ENSSFOG00015019645	-	100	69.954	ENSOMEG00000002219	rbm5	100	68.234	Oryzias_melastigma
ENSSFOG00015019645	-	93	63.934	ENSOGAG00000004205	RBM5	100	63.304	Otolemur_garnettii
ENSSFOG00015019645	-	100	65.457	ENSOARG00000010923	RBM5	100	64.269	Ovis_aries
ENSSFOG00015019645	-	100	65.574	ENSPPAG00000043010	RBM5	100	64.385	Pan_paniscus
ENSSFOG00015019645	-	100	65.574	ENSPPRG00000005404	RBM5	100	64.269	Panthera_pardus
ENSSFOG00015019645	-	100	65.574	ENSPTIG00000000962	RBM5	100	64.269	Panthera_tigris_altaica
ENSSFOG00015019645	-	100	65.574	ENSPTRG00000014946	RBM5	100	64.385	Pan_troglodytes
ENSSFOG00015019645	-	100	65.574	ENSPANG00000018507	RBM5	100	64.385	Papio_anubis
ENSSFOG00015019645	-	74	67.270	ENSPKIG00000019187	-	98	65.449	Paramormyrops_kingsleyae
ENSSFOG00015019645	-	100	72.738	ENSPKIG00000024837	RBM5	100	72.018	Paramormyrops_kingsleyae
ENSSFOG00015019645	-	88	64.589	ENSPSIG00000016073	RBM5	100	63.889	Pelodiscus_sinensis
ENSSFOG00015019645	-	88	77.500	ENSPMGG00000004719	-	99	76.190	Periophthalmus_magnuspinnatus
ENSSFOG00015019645	-	77	60.258	ENSPMGG00000017347	rbm5	100	58.728	Periophthalmus_magnuspinnatus
ENSSFOG00015019645	-	93	55.614	ENSPMAG00000001998	rbm5	99	41.071	Petromyzon_marinus
ENSSFOG00015019645	-	100	66.042	ENSPCIG00000021531	RBM5	100	64.591	Phascolarctos_cinereus
ENSSFOG00015019645	-	99	73.514	ENSPLAG00000006318	rbm5	99	73.243	Poecilia_latipinna
ENSSFOG00015019645	-	74	64.929	ENSPMEG00000008651	rbm5	99	63.981	Poecilia_mexicana
ENSSFOG00015019645	-	99	73.370	ENSPMEG00000004295	rbm5	99	73.098	Poecilia_mexicana
ENSSFOG00015019645	-	99	74.797	ENSPREG00000003795	rbm5	99	74.526	Poecilia_reticulata
ENSSFOG00015019645	-	67	63.877	ENSPCAG00000005459	RBM5	73	60.067	Procavia_capensis
ENSSFOG00015019645	-	100	65.100	ENSPCOG00000025840	RBM5	100	64.269	Propithecus_coquereli
ENSSFOG00015019645	-	100	62.881	ENSPVAG00000006812	RBM5	100	61.949	Pteropus_vampyrus
ENSSFOG00015019645	-	99	76.550	ENSPNYG00000014787	rbm5	99	75.741	Pundamilia_nyererei
ENSSFOG00015019645	-	84	64.056	ENSPNYG00000006361	RBM5	99	62.953	Pundamilia_nyererei
ENSSFOG00015019645	-	99	72.193	ENSPNAG00000012070	rbm5	99	72.000	Pygocentrus_nattereri
ENSSFOG00015019645	-	100	64.754	ENSRNOG00000018153	Rbm5	100	64.269	Rattus_norvegicus
ENSSFOG00015019645	-	100	64.988	ENSRBIG00000012679	RBM5	100	64.269	Rhinopithecus_bieti
ENSSFOG00015019645	-	100	64.988	ENSRROG00000041331	RBM5	100	64.269	Rhinopithecus_roxellana
ENSSFOG00015019645	-	100	65.574	ENSSBOG00000006324	RBM5	100	64.385	Saimiri_boliviensis_boliviensis
ENSSFOG00015019645	-	100	66.159	ENSSHAG00000018260	RBM5	100	64.849	Sarcophilus_harrisii
ENSSFOG00015019645	-	99	77.778	ENSSMAG00000017106	rbm5	99	76.965	Scophthalmus_maximus
ENSSFOG00015019645	-	100	71.642	ENSSDUG00000019775	rbm5	100	70.034	Seriola_dumerili
ENSSFOG00015019645	-	100	69.484	ENSSLDG00000015996	-	100	69.131	Seriola_lalandi_dorsalis
ENSSFOG00015019645	-	100	71.642	ENSSLDG00000002329	rbm5	100	70.034	Seriola_lalandi_dorsalis
ENSSFOG00015019645	-	58	79.221	ENSSARG00000009724	-	66	79.221	Sorex_araneus
ENSSFOG00015019645	-	97	69.312	ENSSPUG00000001876	RBM5	85	63.716	Sphenodon_punctatus
ENSSFOG00015019645	-	100	68.779	ENSSPAG00000020011	-	100	68.310	Stegastes_partitus
ENSSFOG00015019645	-	100	69.425	ENSSPAG00000019638	rbm5	100	68.276	Stegastes_partitus
ENSSFOG00015019645	-	100	65.808	ENSSSCG00000011395	RBM5	100	71.429	Sus_scrofa
ENSSFOG00015019645	-	93	59.320	ENSTGUG00000006417	RBM5	98	60.399	Taeniopygia_guttata
ENSSFOG00015019645	-	100	69.492	ENSTRUG00000008292	rbm5	100	68.060	Takifugu_rubripes
ENSSFOG00015019645	-	99	51.262	ENSTNIG00000014742	rbm5	88	67.509	Tetraodon_nigroviridis
ENSSFOG00015019645	-	100	59.579	ENSTBEG00000005424	RBM5	100	57.889	Tupaia_belangeri
ENSSFOG00015019645	-	100	59.953	ENSTTRG00000007717	RBM5	100	58.933	Tursiops_truncatus
ENSSFOG00015019645	-	100	65.105	ENSUAMG00000028347	RBM5	100	64.269	Ursus_americanus
ENSSFOG00015019645	-	100	65.105	ENSUMAG00000022027	RBM5	100	64.269	Ursus_maritimus
ENSSFOG00015019645	-	90	63.990	ENSVPAG00000009388	RBM5	97	62.763	Vicugna_pacos
ENSSFOG00015019645	-	100	65.222	ENSVVUG00000028647	RBM5	96	68.696	Vulpes_vulpes
ENSSFOG00015019645	-	99	74.797	ENSXMAG00000016369	rbm5	99	74.526	Xiphophorus_maculatus