EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019679 (Gene tree)
Gene ID: 108922220
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 16-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6893 bases
Position: chrKV410812.1:426328-433220
Accession: 108922220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030678	zf-C2H2	PF00096.26	9.6e-36	1	7
ENSSFOP00015030678	zf-C2H2	PF00096.26	9.6e-36	2	7
ENSSFOP00015030678	zf-C2H2	PF00096.26	9.6e-36	3	7
ENSSFOP00015030678	zf-C2H2	PF00096.26	9.6e-36	4	7
ENSSFOP00015030678	zf-C2H2	PF00096.26	9.6e-36	5	7
ENSSFOP00015030678	zf-C2H2	PF00096.26	9.6e-36	6	7
ENSSFOP00015030678	zf-C2H2	PF00096.26	9.6e-36	7	7
ENSSFOP00015030678	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031026	-	2818	XM_018732209	ENSSFOP00015030678	406 (aa)	XP_018587725	A0A1W4YH07

Gene Model

Click here to download ENSSFOG00015019679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019679	-	75	32.203	ENSSFOG00015019818	-	50	32.203
ENSSFOG00015019679	-	81	33.043	ENSSFOG00015015878	-	93	33.043
ENSSFOG00015019679	-	76	37.778	ENSSFOG00015008577	-	86	37.778
ENSSFOG00015019679	-	88	32.787	ENSSFOG00015020478	prdm5	52	32.787
ENSSFOG00015019679	-	84	31.447	ENSSFOG00015014778	znf526	51	31.447
ENSSFOG00015019679	-	77	31.034	ENSSFOG00015006083	-	54	31.034
ENSSFOG00015019679	-	92	32.520	ENSSFOG00015015958	-	53	32.520
ENSSFOG00015019679	-	66	39.024	ENSSFOG00015020993	-	69	36.364
ENSSFOG00015019679	-	96	30.625	ENSSFOG00015000652	ZNF775	70	30.645
ENSSFOG00015019679	-	77	33.058	ENSSFOG00015009678	-	56	32.184
ENSSFOG00015019679	-	75	31.707	ENSSFOG00015015384	-	77	31.707
ENSSFOG00015019679	-	75	31.452	ENSSFOG00015013448	-	87	31.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019679	-	75	30.894	ENSATEG00000002726	-	75	35.556	Anabas_testudineus
ENSSFOG00015019679	-	98	65.291	ENSAMXG00000038507	-	98	64.320	Astyanax_mexicanus
ENSSFOG00015019679	-	75	41.254	ENSCSEG00000012798	-	92	39.934	Cynoglossus_semilaevis
ENSSFOG00015019679	-	100	46.472	ENSELUG00000009258	-	100	54.187	Esox_lucius
ENSSFOG00015019679	-	97	63.575	ENSELUG00000020907	-	96	63.575	Esox_lucius
ENSSFOG00015019679	-	98	55.690	ENSFHEG00000005807	-	97	57.740	Fundulus_heteroclitus
ENSSFOG00015019679	-	98	58.738	ENSGAFG00000003348	-	97	58.495	Gambusia_affinis
ENSSFOG00015019679	-	100	62.981	ENSIPUG00000002513	-	100	62.740	Ictalurus_punctatus
ENSSFOG00015019679	-	100	60.577	ENSKMAG00000014028	-	93	61.631	Kryptolebias_marmoratus
ENSSFOG00015019679	-	100	59.198	ENSMMOG00000009859	-	100	59.906	Mola_mola
ENSSFOG00015019679	-	98	61.928	ENSORLG00000023072	-	98	59.903	Oryzias_latipes
ENSSFOG00015019679	-	98	61.594	ENSORLG00020002684	-	98	61.111	Oryzias_latipes_hni
ENSSFOG00015019679	-	98	61.836	ENSORLG00015018897	-	98	61.353	Oryzias_latipes_hsok
ENSSFOG00015019679	-	98	61.298	ENSOMEG00000010520	-	93	61.058	Oryzias_melastigma
ENSSFOG00015019679	-	98	58.554	ENSPLAG00000005849	-	97	58.134	Poecilia_latipinna
ENSSFOG00015019679	-	98	58.981	ENSPMEG00000020957	-	97	60.000	Poecilia_mexicana
ENSSFOG00015019679	-	98	58.454	ENSPREG00000007939	-	97	59.375	Poecilia_reticulata
ENSSFOG00015019679	-	98	69.212	ENSPNAG00000003839	-	98	69.951	Pygocentrus_nattereri
ENSSFOG00015019679	-	98	58.010	ENSXCOG00000015432	-	97	58.696	Xiphophorus_couchianus
ENSSFOG00015019679	-	98	58.252	ENSXMAG00000029995	-	87	58.993	Xiphophorus_maculatus