EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019681 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5257 bases
Position: chrKV410798.1:5710215-5715471
Accession: 108940612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030697	RRM_1	PF00076.22	1.6e-31	1	2
ENSSFOP00015030697	RRM_1	PF00076.22	1.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031046	-	1104	XM_018762875	ENSSFOP00015030697	367 (aa)	XP_018618391	-

Gene Model

Click here to download ENSSFOG00015019681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019681	-	59	41.629	ENSSFOG00015004989	-	59	43.478
ENSSFOG00015019681	-	56	59.024	ENSSFOG00015008377	srsf5	65	58.291
ENSSFOG00015019681	-	52	86.979	ENSSFOG00015015169	SRSF6	59	87.047
ENSSFOG00015019681	-	62	39.496	ENSSFOG00015002476	SRSF9	72	39.109
ENSSFOG00015019681	-	53	69.072	ENSSFOG00015020292	srsf4	71	80.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019681	-	53	81.959	ENSG00000124193	SRSF6	88	64.286	Homo_sapiens
ENSSFOG00015019681	-	53	67.526	ENSAMEG00000003710	SRSF6	89	56.083	Ailuropoda_melanoleuca
ENSSFOG00015019681	-	91	71.045	ENSACIG00000023658	-	91	66.959	Amphilophus_citrinellus
ENSSFOG00015019681	-	72	71.698	ENSACIG00000020091	-	95	81.159	Amphilophus_citrinellus
ENSSFOG00015019681	-	53	87.047	ENSAPEG00000013086	-	94	72.093	Amphiprion_percula
ENSSFOG00015019681	-	53	82.902	ENSAPEG00000020746	-	89	82.383	Amphiprion_percula
ENSSFOG00015019681	-	53	80.829	ENSATEG00000007255	-	95	62.099	Anabas_testudineus
ENSSFOG00015019681	-	53	82.383	ENSACAG00000002061	SRSF6	91	65.352	Anolis_carolinensis
ENSSFOG00015019681	-	53	81.959	ENSANAG00000024080	SRSF6	89	64.201	Aotus_nancymaae
ENSSFOG00015019681	-	53	87.565	ENSAMXG00000042692	-	96	85.000	Astyanax_mexicanus
ENSSFOG00015019681	-	80	86.528	ENSAMXG00000003101	-	97	68.571	Astyanax_mexicanus
ENSSFOG00015019681	-	53	81.959	ENSBTAG00000008527	SRSF6	89	64.985	Bos_taurus
ENSSFOG00015019681	-	53	81.959	ENSCJAG00000048403	SRSF6	56	94.737	Callithrix_jacchus
ENSSFOG00015019681	-	53	81.959	ENSCAFG00000009289	SRSF6	89	64.881	Canis_familiaris
ENSSFOG00015019681	-	53	81.959	ENSCAFG00020013559	SRSF6	89	64.881	Canis_lupus_dingo
ENSSFOG00015019681	-	53	80.928	ENSCHIG00000009148	-	89	64.392	Capra_hircus
ENSSFOG00015019681	-	53	81.959	ENSCHIG00000015890	-	89	64.985	Capra_hircus
ENSSFOG00015019681	-	53	81.959	ENSCCAG00000026018	-	89	64.095	Cebus_capucinus
ENSSFOG00015019681	-	53	72.081	ENSCCAG00000018540	-	60	71.795	Cebus_capucinus
ENSSFOG00015019681	-	53	81.959	ENSCATG00000030794	SRSF6	89	64.516	Cercocebus_atys
ENSSFOG00015019681	-	53	81.959	ENSCLAG00000010247	SRSF6	56	94.737	Chinchilla_lanigera
ENSSFOG00015019681	-	53	81.959	ENSCSAG00000014022	SRSF6	89	64.516	Chlorocebus_sabaeus
ENSSFOG00015019681	-	70	67.315	ENSCPBG00000018200	SRSF6	93	65.915	Chrysemys_picta_bellii
ENSSFOG00015019681	-	53	80.928	ENSCANG00000037774	-	89	63.690	Colobus_angolensis_palliatus
ENSSFOG00015019681	-	53	81.959	ENSCGRG00001022339	Srsf6	90	64.286	Cricetulus_griseus_chok1gshd
ENSSFOG00015019681	-	53	78.238	ENSDARG00000013729	srsf6a	93	67.218	Danio_rerio
ENSSFOG00015019681	-	53	88.601	ENSDARG00000016783	srsf6b	80	96.053	Danio_rerio
ENSSFOG00015019681	-	53	81.959	ENSDNOG00000008410	SRSF6	88	64.516	Dasypus_novemcinctus
ENSSFOG00015019681	-	53	81.959	ENSDORG00000028378	Srsf6	56	94.737	Dipodomys_ordii
ENSSFOG00015019681	-	53	79.793	ENSETEG00000006221	SRSF6	93	59.669	Echinops_telfairi
ENSSFOG00015019681	-	53	81.959	ENSEASG00005023429	SRSF6	89	65.774	Equus_asinus_asinus
ENSSFOG00015019681	-	53	81.959	ENSECAG00000023932	SRSF6	93	64.865	Equus_caballus
ENSSFOG00015019681	-	53	82.143	ENSELUG00000013506	SRSF6	96	70.930	Esox_lucius
ENSSFOG00015019681	-	53	85.204	ENSELUG00000024182	SRSF6	75	96.053	Esox_lucius
ENSSFOG00015019681	-	53	81.959	ENSFCAG00000032814	SRSF6	89	64.881	Felis_catus
ENSSFOG00015019681	-	93	68.605	ENSFHEG00000023065	srsf6a	93	65.698	Fundulus_heteroclitus
ENSSFOG00015019681	-	77	82.383	ENSGMOG00000014458	srsf6a	94	70.868	Gadus_morhua
ENSSFOG00015019681	-	52	69.474	ENSGMOG00000006105	srsf6a	64	68.205	Gadus_morhua
ENSSFOG00015019681	-	53	82.564	ENSGALG00000000990	SRSF6	93	64.986	Gallus_gallus
ENSSFOG00015019681	-	93	67.222	ENSGACG00000006084	srsf6a	95	67.236	Gasterosteus_aculeatus
ENSSFOG00015019681	-	70	67.315	ENSGAGG00000003238	SRSF6	93	65.915	Gopherus_agassizii
ENSSFOG00015019681	-	53	81.959	ENSGGOG00000009808	SRSF6	88	64.286	Gorilla_gorilla
ENSSFOG00015019681	-	81	67.568	ENSHBUG00000006386	-	57	83.420	Haplochromis_burtoni
ENSSFOG00015019681	-	53	81.959	ENSHGLG00000007348	SRSF6	56	94.737	Heterocephalus_glaber_female
ENSSFOG00015019681	-	54	64.078	ENSHGLG00000007701	-	56	64.767	Heterocephalus_glaber_female
ENSSFOG00015019681	-	53	80.311	ENSHCOG00000002740	srsf6a	57	81.347	Hippocampus_comes
ENSSFOG00015019681	-	53	82.990	ENSIPUG00000004776	-	63	85.052	Ictalurus_punctatus
ENSSFOG00015019681	-	51	80.749	ENSIPUG00000016856	SRSF6	91	70.181	Ictalurus_punctatus
ENSSFOG00015019681	-	72	64.179	ENSSTOG00000010866	SRSF6	56	94.737	Ictidomys_tridecemlineatus
ENSSFOG00015019681	-	100	74.684	ENSKMAG00000011934	srsf6a	100	74.107	Kryptolebias_marmoratus
ENSSFOG00015019681	-	91	71.221	ENSLBEG00000007356	srsf6a	94	72.046	Labrus_bergylta
ENSSFOG00015019681	-	93	65.527	ENSLACG00000005466	SRSF6	91	65.797	Latimeria_chalumnae
ENSSFOG00015019681	-	53	81.959	ENSMFAG00000036925	SRSF6	89	64.516	Macaca_fascicularis
ENSSFOG00015019681	-	53	81.959	ENSMMUG00000006742	SRSF6	89	64.516	Macaca_mulatta
ENSSFOG00015019681	-	53	81.959	ENSMNEG00000038270	-	87	64.653	Macaca_nemestrina
ENSSFOG00015019681	-	53	81.959	ENSMNEG00000027392	-	89	64.516	Macaca_nemestrina
ENSSFOG00015019681	-	53	86.528	ENSMAMG00000017161	srsf6a	94	72.254	Mastacembelus_armatus
ENSSFOG00015019681	-	81	67.785	ENSMZEG00005008032	-	56	83.420	Maylandia_zebra
ENSSFOG00015019681	-	52	80.729	ENSMZEG00005020658	-	60	80.729	Maylandia_zebra
ENSSFOG00015019681	-	53	81.443	ENSMICG00000008537	SRSF6	88	63.988	Microcebus_murinus
ENSSFOG00015019681	-	68	78.846	ENSMALG00000003702	srsf6a	66	76.166	Monopterus_albus
ENSSFOG00015019681	-	53	81.959	MGP_CAROLIEiJ_G0024606	Srsf6	90	64.583	Mus_caroli
ENSSFOG00015019681	-	53	81.959	MGP_PahariEiJ_G0026050	Srsf6	90	64.583	Mus_pahari
ENSSFOG00015019681	-	53	81.959	ENSMPUG00000017692	SRSF6	100	66.044	Mustela_putorius_furo
ENSSFOG00015019681	-	53	57.727	ENSMLUG00000016618	SRSF6	92	52.408	Myotis_lucifugus
ENSSFOG00015019681	-	53	81.959	ENSNGAG00000017560	Srsf6	90	64.759	Nannospalax_galili
ENSSFOG00015019681	-	81	65.203	ENSNBRG00000014709	-	57	83.420	Neolamprologus_brichardi
ENSSFOG00015019681	-	52	86.979	ENSNBRG00000001846	-	91	71.676	Neolamprologus_brichardi
ENSSFOG00015019681	-	53	81.959	ENSNLEG00000006524	SRSF6	88	64.286	Nomascus_leucogenys
ENSSFOG00015019681	-	62	72.807	ENSMEUG00000014615	SRSF6	99	65.689	Notamacropus_eugenii
ENSSFOG00015019681	-	52	88.021	ENSONIG00000001925	-	88	72.384	Oreochromis_niloticus
ENSSFOG00015019681	-	53	83.938	ENSONIG00000020247	-	95	65.217	Oreochromis_niloticus
ENSSFOG00015019681	-	53	67.000	ENSOCUG00000009785	-	99	56.667	Oryctolagus_cuniculus
ENSSFOG00015019681	-	53	72.021	ENSOMEG00000006001	srsf6a	100	65.183	Oryzias_melastigma
ENSSFOG00015019681	-	53	81.443	ENSOGAG00000014468	SRSF6	53	81.865	Otolemur_garnettii
ENSSFOG00015019681	-	53	79.793	ENSOARG00000003117	SRSF6	89	63.501	Ovis_aries
ENSSFOG00015019681	-	72	53.558	ENSPPAG00000043131	-	98	56.845	Pan_paniscus
ENSSFOG00015019681	-	53	81.443	ENSPPAG00000034327	-	88	63.988	Pan_paniscus
ENSSFOG00015019681	-	53	81.959	ENSPPRG00000008917	SRSF6	89	64.881	Panthera_pardus
ENSSFOG00015019681	-	53	77.835	ENSPTIG00000021305	-	74	56.649	Panthera_tigris_altaica
ENSSFOG00015019681	-	53	81.959	ENSPTRG00000044686	-	92	63.037	Pan_troglodytes
ENSSFOG00015019681	-	72	53.558	ENSPTRG00000046274	-	98	56.845	Pan_troglodytes
ENSSFOG00015019681	-	53	81.959	ENSPANG00000035224	SRSF6	89	64.516	Papio_anubis
ENSSFOG00015019681	-	94	79.091	ENSPKIG00000018463	-	93	79.827	Paramormyrops_kingsleyae
ENSSFOG00015019681	-	84	54.516	ENSPKIG00000015703	-	95	59.375	Paramormyrops_kingsleyae
ENSSFOG00015019681	-	93	65.318	ENSPMGG00000014963	srsf6a	90	86.528	Periophthalmus_magnuspinnatus
ENSSFOG00015019681	-	53	91.228	ENSPFOG00000006437	srsf6a	95	70.940	Poecilia_formosa
ENSSFOG00015019681	-	92	64.451	ENSPLAG00000009243	srsf6a	79	81.343	Poecilia_latipinna
ENSSFOG00015019681	-	53	82.902	ENSPMEG00000006042	SRSF6	94	71.714	Poecilia_mexicana
ENSSFOG00015019681	-	53	81.959	ENSPPYG00000011019	SRSF6	88	64.286	Pongo_abelii
ENSSFOG00015019681	-	53	80.412	ENSPCAG00000010954	SRSF6	95	63.533	Procavia_capensis
ENSSFOG00015019681	-	53	81.443	ENSPCOG00000026364	SRSF6	88	64.809	Propithecus_coquereli
ENSSFOG00015019681	-	53	81.959	ENSPVAG00000015232	SRSF6	92	63.324	Pteropus_vampyrus
ENSSFOG00015019681	-	81	65.203	ENSPNYG00000004944	-	57	83.420	Pundamilia_nyererei
ENSSFOG00015019681	-	53	82.383	ENSRBIG00000041414	SRSF6	58	94.737	Rhinopithecus_bieti
ENSSFOG00015019681	-	53	81.959	ENSRROG00000029989	SRSF6	89	64.286	Rhinopithecus_roxellana
ENSSFOG00015019681	-	53	81.959	ENSSBOG00000033708	-	89	64.095	Saimiri_boliviensis_boliviensis
ENSSFOG00015019681	-	52	66.495	ENSSBOG00000034078	-	55	66.327	Saimiri_boliviensis_boliviensis
ENSSFOG00015019681	-	95	62.464	ENSSMAG00000017447	-	91	63.526	Scophthalmus_maximus
ENSSFOG00015019681	-	93	63.073	ENSSDUG00000016097	srsf6a	94	71.387	Seriola_dumerili
ENSSFOG00015019681	-	68	80.702	ENSSLDG00000022841	srsf6a	94	71.387	Seriola_lalandi_dorsalis
ENSSFOG00015019681	-	53	83.420	ENSSPUG00000004967	SRSF6	93	63.025	Sphenodon_punctatus
ENSSFOG00015019681	-	100	69.620	ENSSPAG00000002362	srsf6a	100	87.047	Stegastes_partitus
ENSSFOG00015019681	-	53	81.959	ENSSSCG00000007362	SRSF6	89	63.743	Sus_scrofa
ENSSFOG00015019681	-	53	82.383	ENSTGUG00000003455	SRSF6	93	64.986	Taeniopygia_guttata
ENSSFOG00015019681	-	98	64.706	ENSTNIG00000001692	srsf6a	56	85.492	Tetraodon_nigroviridis
ENSSFOG00015019681	-	53	81.959	ENSUAMG00000003559	SRSF6	89	64.881	Ursus_americanus