EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019732 (Gene tree)
Gene ID: 108930873
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 13187 bases
Position: chrKV410788.1:4311439-4324625
Accession: 108930873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015030788	PARP	PF00644.20	1.1e-24	1	1
ENSSFOP00015030830	PARP	PF00644.20	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031137	-	6505	XM_018746353	ENSSFOP00015030788	2061 (aa)	XP_018601869	-
ENSSFOT00015031179	-	1740	-	ENSSFOP00015030830	579 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015019732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019732	-	79	45.128	ENSSFOG00015001605	-	91	49.673
ENSSFOG00015019732	-	73	34.188	ENSSFOG00015012828	-	80	37.611
ENSSFOG00015019732	-	53	34.969	ENSSFOG00015012771	-	57	34.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019732	-	71	33.790	ENSAPOG00000002274	-	95	32.298	Acanthochromis_polyacanthus
ENSSFOG00015019732	-	73	40.000	ENSACIG00000014929	-	87	43.411	Amphilophus_citrinellus
ENSSFOG00015019732	-	82	44.706	ENSAOCG00000020608	-	99	33.673	Amphiprion_ocellaris
ENSSFOG00015019732	-	82	61.446	ENSAMXG00000010209	-	99	44.818	Astyanax_mexicanus
ENSSFOG00015019732	-	77	45.882	ENSAMXG00000010091	-	100	34.400	Astyanax_mexicanus
ENSSFOG00015019732	-	80	38.743	ENSCVAG00000009352	-	99	30.028	Cyprinodon_variegatus
ENSSFOG00015019732	-	68	60.664	ENSDARG00000098398	CABZ01079480.1	100	47.538	Danio_rerio
ENSSFOG00015019732	-	83	38.776	ENSELUG00000013643	-	99	30.469	Esox_lucius
ENSSFOG00015019732	-	98	47.615	ENSELUG00000004826	-	99	47.684	Esox_lucius
ENSSFOG00015019732	-	73	39.655	ENSHBUG00000013327	-	87	41.045	Haplochromis_burtoni
ENSSFOG00015019732	-	58	69.444	ENSIPUG00000001876	-	100	49.808	Ictalurus_punctatus
ENSSFOG00015019732	-	68	31.884	ENSIPUG00000019762	-	80	33.600	Ictalurus_punctatus
ENSSFOG00015019732	-	79	41.060	ENSIPUG00000019562	-	84	44.444	Ictalurus_punctatus
ENSSFOG00015019732	-	82	40.933	ENSKMAG00000010882	-	89	43.697	Kryptolebias_marmoratus
ENSSFOG00015019732	-	85	39.594	ENSLBEG00000026419	-	82	32.317	Labrus_bergylta
ENSSFOG00015019732	-	87	38.323	ENSMZEG00005027856	-	60	44.000	Maylandia_zebra
ENSSFOG00015019732	-	87	31.489	ENSMZEG00005002061	-	58	32.500	Maylandia_zebra
ENSSFOG00015019732	-	82	42.405	ENSMMOG00000010419	-	99	45.038	Mola_mola
ENSSFOG00015019732	-	71	47.619	ENSNBRG00000002998	-	99	41.509	Neolamprologus_brichardi
ENSSFOG00015019732	-	50	35.545	ENSONIG00000000241	-	99	32.877	Oreochromis_niloticus
ENSSFOG00015019732	-	81	42.012	ENSORLG00000017404	-	89	48.718	Oryzias_latipes
ENSSFOG00015019732	-	91	35.533	ENSORLG00000017386	-	74	32.026	Oryzias_latipes
ENSSFOG00015019732	-	73	40.000	ENSORLG00020014046	-	99	33.333	Oryzias_latipes_hni
ENSSFOG00015019732	-	78	43.011	ENSORLG00015004253	-	96	34.091	Oryzias_latipes_hsok
ENSSFOG00015019732	-	85	37.126	ENSORLG00015004157	-	88	40.984	Oryzias_latipes_hsok
ENSSFOG00015019732	-	67	37.363	ENSOMEG00000009483	-	85	37.363	Oryzias_melastigma
ENSSFOG00015019732	-	82	68.692	ENSPKIG00000004064	-	96	68.447	Paramormyrops_kingsleyae
ENSSFOG00015019732	-	78	42.553	ENSPFOG00000015738	-	86	32.000	Poecilia_formosa
ENSSFOG00015019732	-	73	40.171	ENSPLAG00000022742	-	88	40.541	Poecilia_latipinna
ENSSFOG00015019732	-	87	40.645	ENSPREG00000017145	-	99	33.101	Poecilia_reticulata
ENSSFOG00015019732	-	66	61.446	ENSPNAG00000028914	-	84	61.446	Pygocentrus_nattereri
ENSSFOG00015019732	-	86	37.209	ENSPNAG00000026750	-	96	39.269	Pygocentrus_nattereri
ENSSFOG00015019732	-	96	51.449	ENSPNAG00000005968	-	99	58.197	Pygocentrus_nattereri
ENSSFOG00015019732	-	52	62.222	ENSPNAG00000006111	-	100	50.669	Pygocentrus_nattereri
ENSSFOG00015019732	-	95	43.011	ENSSMAG00000016922	-	81	50.413	Scophthalmus_maximus
ENSSFOG00015019732	-	83	39.487	ENSSDUG00000013560	-	92	32.716	Seriola_dumerili
ENSSFOG00015019732	-	77	41.463	ENSSPAG00000014708	-	93	43.307	Stegastes_partitus
ENSSFOG00015019732	-	75	41.667	ENSXCOG00000012535	-	99	34.146	Xiphophorus_couchianus
ENSSFOG00015019732	-	86	35.443	ENSXMAG00000015158	-	99	40.602	Xiphophorus_maculatus