EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019818 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 90479 bases
Position: chrKV411275.1:133896-224374
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	1	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	2	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	3	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	4	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	5	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	6	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	7	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	8	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	9	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	10	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	11	12
ENSSFOP00015031247	zf-C2H2	PF00096.26	7.7e-85	12	12
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	1	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	2	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	3	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	4	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	5	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	6	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	7	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	8	9
ENSSFOP00015031001	zf-C2H2	PF00096.26	6.2e-43	9	9
ENSSFOP00015031092	zf-C2H2	PF00096.26	4.7e-23	1	5
ENSSFOP00015031092	zf-C2H2	PF00096.26	4.7e-23	2	5
ENSSFOP00015031092	zf-C2H2	PF00096.26	4.7e-23	3	5
ENSSFOP00015031092	zf-C2H2	PF00096.26	4.7e-23	4	5
ENSSFOP00015031092	zf-C2H2	PF00096.26	4.7e-23	5	5
ENSSFOP00015031247	zf-met	PF12874.7	4.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031350	-	1347	-	ENSSFOP00015031001	448 (aa)	-	-
ENSSFOT00015031442	-	906	-	ENSSFOP00015031092	301 (aa)	-	-
ENSSFOT00015031599	-	2097	-	ENSSFOP00015031247	698 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015019818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019818	-	86	41.818	ENSSFOG00015008994	znf236	65	41.818
ENSSFOG00015019818	-	95	37.500	ENSSFOG00015007599	ZNF521	67	31.797
ENSSFOG00015019818	-	73	37.805	ENSSFOG00015020478	prdm5	81	37.303
ENSSFOG00015019818	-	68	39.048	ENSSFOG00015021176	-	58	39.048
ENSSFOG00015019818	-	73	37.037	ENSSFOG00015018025	SNAI2	53	37.956
ENSSFOG00015019818	-	73	41.916	ENSSFOG00015013244	patz1	57	40.719
ENSSFOG00015019818	-	81	50.000	ENSSFOG00015020993	-	78	50.286
ENSSFOG00015019818	-	85	47.119	ENSSFOG00015015958	-	75	46.939
ENSSFOG00015019818	-	70	46.296	ENSSFOG00015011531	-	88	41.860
ENSSFOG00015019818	-	81	36.697	ENSSFOG00015017155	-	91	30.952
ENSSFOG00015019818	-	91	40.299	ENSSFOG00015014678	znf341	60	40.299
ENSSFOG00015019818	-	80	40.000	ENSSFOG00015004737	si:dkey-89b17.4	96	31.106
ENSSFOG00015019818	-	74	35.714	ENSSFOG00015021578	snai1a	54	35.714
ENSSFOG00015019818	-	88	50.000	ENSSFOG00015006108	-	58	52.332
ENSSFOG00015019818	-	72	41.304	ENSSFOG00015011566	gfi1b	54	41.304
ENSSFOG00015019818	-	95	63.415	ENSSFOG00015000652	ZNF775	98	63.415
ENSSFOG00015019818	-	92	37.872	ENSSFOG00015012207	-	85	37.872
ENSSFOG00015019818	-	79	31.349	ENSSFOG00015013930	PRDM15	50	36.424
ENSSFOG00015019818	-	88	46.667	ENSSFOG00015009678	-	60	50.699
ENSSFOG00015019818	-	82	37.705	ENSSFOG00015023295	znf652	84	41.304
ENSSFOG00015019818	-	90	49.696	ENSSFOG00015010829	-	94	49.696
ENSSFOG00015019818	-	80	39.146	ENSSFOG00015015427	znf366	59	39.146
ENSSFOG00015019818	-	77	44.019	ENSSFOG00015003121	znf668	98	42.198
ENSSFOG00015019818	-	73	48.447	ENSSFOG00015023669	-	98	47.826
ENSSFOG00015019818	-	78	53.214	ENSSFOG00015013448	-	98	53.214
ENSSFOG00015019818	-	50	32.203	ENSSFOG00015019679	-	75	32.203
ENSSFOG00015019818	-	66	49.020	ENSSFOG00015009159	SALL3	59	49.020
ENSSFOG00015019818	-	70	42.149	ENSSFOG00015013893	si:ch211-154o6.2	55	37.736
ENSSFOG00015019818	-	79	39.806	ENSSFOG00015016115	snai3	52	38.750
ENSSFOG00015019818	-	67	36.943	ENSSFOG00015021699	si:ch211-166g5.4	61	38.571
ENSSFOG00015019818	-	79	39.286	ENSSFOG00015008114	-	56	39.286
ENSSFOG00015019818	-	79	36.486	ENSSFOG00015004064	-	70	36.486
ENSSFOG00015019818	-	68	41.667	ENSSFOG00015014778	znf526	63	35.333
ENSSFOG00015019818	-	79	43.464	ENSSFOG00015021831	-	76	43.464
ENSSFOG00015019818	-	82	47.368	ENSSFOG00015008577	-	99	49.537
ENSSFOG00015019818	-	64	40.625	ENSSFOG00015001117	rreb1b	54	40.625
ENSSFOG00015019818	-	73	48.851	ENSSFOG00015006083	-	57	48.876
ENSSFOG00015019818	-	83	48.361	ENSSFOG00015015384	-	94	52.364
ENSSFOG00015019818	-	84	38.636	ENSSFOG00015001195	SCRT1	86	38.636
ENSSFOG00015019818	-	79	37.346	ENSSFOG00015012089	ZNF319	91	42.204
ENSSFOG00015019818	-	87	35.450	ENSSFOG00015006767	znf131	56	35.450
ENSSFOG00015019818	-	75	39.744	ENSSFOG00015021291	e4f1	62	35.404
ENSSFOG00015019818	-	81	42.857	ENSSFOG00015010128	ZNF521	67	42.857
ENSSFOG00015019818	-	93	44.048	ENSSFOG00015015878	-	93	49.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019818	-	94	43.027	ENSACAG00000024956	-	77	48.985	Anolis_carolinensis
ENSSFOG00015019818	-	91	50.305	ENSACAG00000008664	-	73	50.305	Anolis_carolinensis
ENSSFOG00015019818	-	76	44.490	ENSACAG00000024898	-	99	45.126	Anolis_carolinensis
ENSSFOG00015019818	-	75	50.000	ENSAMXG00000038325	-	95	53.947	Astyanax_mexicanus
ENSSFOG00015019818	-	74	53.043	ENSAMXG00000042784	-	95	55.263	Astyanax_mexicanus
ENSSFOG00015019818	-	84	50.239	ENSAMXG00000010805	-	96	56.459	Astyanax_mexicanus
ENSSFOG00015019818	-	82	53.431	ENSAMXG00000034344	-	93	55.466	Astyanax_mexicanus
ENSSFOG00015019818	-	75	57.597	ENSAMXG00000025452	-	99	60.114	Astyanax_mexicanus
ENSSFOG00015019818	-	86	44.079	ENSAMXG00000040198	-	54	44.079	Astyanax_mexicanus
ENSSFOG00015019818	-	69	56.456	ENSAMXG00000038536	-	99	56.456	Astyanax_mexicanus
ENSSFOG00015019818	-	75	59.740	ENSAMXG00000036233	-	93	59.740	Astyanax_mexicanus
ENSSFOG00015019818	-	69	55.460	ENSAMXG00000042746	-	95	55.460	Astyanax_mexicanus
ENSSFOG00015019818	-	73	55.556	ENSAMXG00000032841	-	75	55.500	Astyanax_mexicanus
ENSSFOG00015019818	-	82	62.917	ENSAMXG00000038636	-	99	62.917	Astyanax_mexicanus
ENSSFOG00015019818	-	90	53.543	ENSAMXG00000034847	-	96	56.049	Astyanax_mexicanus
ENSSFOG00015019818	-	73	42.289	ENSAMXG00000035246	-	77	42.289	Astyanax_mexicanus
ENSSFOG00015019818	-	83	37.811	ENSBTAG00000038322	-	94	37.811	Bos_taurus
ENSSFOG00015019818	-	92	40.550	ENSCPBG00000013652	-	72	43.137	Chrysemys_picta_bellii
ENSSFOG00015019818	-	77	51.584	ENSCPBG00000001526	-	97	45.246	Chrysemys_picta_bellii
ENSSFOG00015019818	-	90	36.923	ENSCPBG00000008580	-	81	36.923	Chrysemys_picta_bellii
ENSSFOG00015019818	-	73	54.610	ENSCPBG00000026433	-	53	55.319	Chrysemys_picta_bellii
ENSSFOG00015019818	-	94	50.000	ENSCSAVG00000010960	-	99	50.957	Ciona_savignyi
ENSSFOG00015019818	-	74	41.060	ENSDNOG00000047495	-	78	41.060	Dasypus_novemcinctus
ENSSFOG00015019818	-	79	47.550	ENSEBUG00000011694	-	97	53.102	Eptatretus_burgeri
ENSSFOG00015019818	-	82	55.079	ENSEBUG00000012919	-	85	55.079	Eptatretus_burgeri
ENSSFOG00015019818	-	73	52.613	ENSEBUG00000008306	-	82	53.254	Eptatretus_burgeri
ENSSFOG00015019818	-	77	47.186	ENSEBUG00000015837	-	78	44.211	Eptatretus_burgeri
ENSSFOG00015019818	-	90	42.029	ENSEBUG00000014717	-	83	42.029	Eptatretus_burgeri
ENSSFOG00015019818	-	90	48.062	ENSEBUG00000005264	-	88	48.062	Eptatretus_burgeri
ENSSFOG00015019818	-	83	53.659	ENSEBUG00000011435	-	99	53.659	Eptatretus_burgeri
ENSSFOG00015019818	-	79	50.161	ENSEBUG00000002075	-	81	48.677	Eptatretus_burgeri
ENSSFOG00015019818	-	82	40.678	ENSEBUG00000013875	-	84	42.384	Eptatretus_burgeri
ENSSFOG00015019818	-	74	39.735	ENSEASG00005004469	-	75	39.672	Equus_asinus_asinus
ENSSFOG00015019818	-	78	40.404	ENSFHEG00000004382	-	59	45.882	Fundulus_heteroclitus
ENSSFOG00015019818	-	69	54.545	ENSGMOG00000018506	-	96	54.545	Gadus_morhua
ENSSFOG00015019818	-	82	54.237	ENSGALG00000044069	-	83	54.237	Gallus_gallus
ENSSFOG00015019818	-	77	45.128	ENSGALG00000055127	-	83	46.356	Gallus_gallus
ENSSFOG00015019818	-	92	47.778	ENSGALG00000053507	-	91	51.282	Gallus_gallus
ENSSFOG00015019818	-	85	50.781	ENSGALG00000054325	-	100	50.781	Gallus_gallus
ENSSFOG00015019818	-	73	42.331	ENSGALG00000049609	-	57	44.444	Gallus_gallus
ENSSFOG00015019818	-	84	46.541	ENSGALG00000046336	-	99	56.478	Gallus_gallus
ENSSFOG00015019818	-	73	47.059	ENSGACG00000006283	-	98	39.560	Gasterosteus_aculeatus
ENSSFOG00015019818	-	74	47.791	ENSGAGG00000011366	-	97	43.787	Gopherus_agassizii
ENSSFOG00015019818	-	74	51.768	ENSGAGG00000018885	-	70	51.768	Gopherus_agassizii
ENSSFOG00015019818	-	74	51.327	ENSGAGG00000011399	-	98	51.256	Gopherus_agassizii
ENSSFOG00015019818	-	77	39.382	ENSHCOG00000018201	-	87	39.382	Hippocampus_comes
ENSSFOG00015019818	-	90	53.420	ENSIPUG00000015468	-	95	59.079	Ictalurus_punctatus
ENSSFOG00015019818	-	71	42.647	ENSIPUG00000012109	ZN12	72	38.750	Ictalurus_punctatus
ENSSFOG00015019818	-	81	49.515	ENSIPUG00000021515	-	85	56.152	Ictalurus_punctatus
ENSSFOG00015019818	-	81	38.314	ENSJJAG00000023633	Zfp672	92	44.225	Jaculus_jaculus
ENSSFOG00015019818	-	90	38.989	ENSLACG00000009005	-	100	39.103	Latimeria_chalumnae
ENSSFOG00015019818	-	81	51.360	ENSLACG00000022211	-	79	53.964	Latimeria_chalumnae
ENSSFOG00015019818	-	75	36.170	ENSLACG00000005264	-	99	38.290	Latimeria_chalumnae
ENSSFOG00015019818	-	72	44.041	ENSLOCG00000014210	-	54	39.378	Lepisosteus_oculatus
ENSSFOG00015019818	-	82	38.073	ENSLOCG00000017864	-	99	42.295	Lepisosteus_oculatus
ENSSFOG00015019818	-	75	55.396	ENSMGAG00000013362	-	99	55.396	Meleagris_gallopavo
ENSSFOG00015019818	-	79	45.020	ENSMAUG00000009945	Zfp672	88	44.363	Mesocricetus_auratus
ENSSFOG00015019818	-	73	43.636	ENSMMOG00000003923	-	87	47.445	Mola_mola
ENSSFOG00015019818	-	78	40.584	ENSMODG00000010532	-	93	40.976	Monodelphis_domestica
ENSSFOG00015019818	-	95	42.816	ENSMODG00000001880	-	88	46.288	Monodelphis_domestica
ENSSFOG00015019818	-	82	42.246	MGP_CAROLIEiJ_G0016391	Zfp672	100	48.718	Mus_caroli
ENSSFOG00015019818	-	73	43.969	MGP_CAROLIEiJ_G0030502	-	66	46.275	Mus_caroli
ENSSFOG00015019818	-	75	43.796	ENSMUSG00000030823	9130019O22Rik	69	45.333	Mus_musculus
ENSSFOG00015019818	-	69	43.415	ENSMUSG00000049755	Zfp672	100	48.718	Mus_musculus
ENSSFOG00015019818	-	82	42.246	MGP_SPRETEiJ_G0017233	Zfp672	99	47.436	Mus_spretus
ENSSFOG00015019818	-	83	44.141	MGP_SPRETEiJ_G0031613	-	84	44.574	Mus_spretus
ENSSFOG00015019818	-	79	44.335	ENSNGAG00000015777	Zim1	69	45.625	Nannospalax_galili
ENSSFOG00015019818	-	75	39.921	ENSNBRG00000000708	-	93	43.455	Neolamprologus_brichardi
ENSSFOG00015019818	-	73	45.455	ENSNBRG00000007276	-	89	45.455	Neolamprologus_brichardi
ENSSFOG00015019818	-	70	49.167	ENSORLG00020001922	-	91	45.588	Oryzias_latipes_hni
ENSSFOG00015019818	-	73	48.760	ENSOMEG00000001598	-	66	48.760	Oryzias_melastigma
ENSSFOG00015019818	-	81	50.000	ENSPSIG00000010328	-	71	48.464	Pelodiscus_sinensis
ENSSFOG00015019818	-	73	50.161	ENSPSIG00000010248	-	66	52.243	Pelodiscus_sinensis
ENSSFOG00015019818	-	71	52.707	ENSPSIG00000005603	-	71	52.707	Pelodiscus_sinensis
ENSSFOG00015019818	-	69	55.794	ENSPSIG00000004502	-	54	55.794	Pelodiscus_sinensis
ENSSFOG00015019818	-	73	50.000	ENSPSIG00000000672	-	82	50.000	Pelodiscus_sinensis
ENSSFOG00015019818	-	83	44.729	ENSPSIG00000003152	-	78	53.731	Pelodiscus_sinensis
ENSSFOG00015019818	-	76	45.570	ENSPSIG00000006790	-	88	51.613	Pelodiscus_sinensis
ENSSFOG00015019818	-	84	43.415	ENSPSIG00000005672	-	99	43.415	Pelodiscus_sinensis
ENSSFOG00015019818	-	73	44.172	ENSPSIG00000012650	-	79	44.889	Pelodiscus_sinensis
ENSSFOG00015019818	-	90	51.623	ENSPSIG00000013021	-	76	53.070	Pelodiscus_sinensis
ENSSFOG00015019818	-	87	35.942	ENSPSIG00000006586	-	99	38.589	Pelodiscus_sinensis
ENSSFOG00015019818	-	81	45.192	ENSPSIG00000015459	-	73	52.214	Pelodiscus_sinensis
ENSSFOG00015019818	-	75	47.883	ENSPSIG00000016380	-	74	51.081	Pelodiscus_sinensis
ENSSFOG00015019818	-	75	44.094	ENSPREG00000002642	-	91	44.094	Poecilia_reticulata
ENSSFOG00015019818	-	73	47.541	ENSPNYG00000015486	-	62	47.541	Pundamilia_nyererei
ENSSFOG00015019818	-	75	58.824	ENSPNAG00000018395	-	85	58.824	Pygocentrus_nattereri
ENSSFOG00015019818	-	91	54.950	ENSPNAG00000000088	-	95	54.950	Pygocentrus_nattereri
ENSSFOG00015019818	-	81	39.298	ENSRNOG00000002713	Zfp672	90	44.499	Rattus_norvegicus
ENSSFOG00015019818	-	79	40.278	ENSSHAG00000018106	-	75	45.432	Sarcophilus_harrisii
ENSSFOG00015019818	-	77	38.535	ENSSMAG00000004252	-	89	39.623	Scophthalmus_maximus
ENSSFOG00015019818	-	82	47.596	ENSSPUG00000010016	-	96	47.596	Sphenodon_punctatus
ENSSFOG00015019818	-	73	53.299	ENSSPUG00000004366	-	60	53.913	Sphenodon_punctatus
ENSSFOG00015019818	-	73	49.541	ENSSPAG00000021653	-	93	49.541	Stegastes_partitus
ENSSFOG00015019818	-	73	51.429	ENSTGUG00000018351	-	99	51.429	Taeniopygia_guttata
ENSSFOG00015019818	-	77	48.571	ENSTGUG00000015210	-	100	52.000	Taeniopygia_guttata
ENSSFOG00015019818	-	75	39.487	ENSTRUG00000022066	-	89	41.071	Takifugu_rubripes
ENSSFOG00015019818	-	82	40.260	ENSXETG00000031192	-	100	43.953	Xenopus_tropicalis
ENSSFOG00015019818	-	74	45.349	ENSXCOG00000006553	-	97	45.627	Xiphophorus_couchianus
ENSSFOG00015019818	-	86	43.602	ENSXMAG00000026680	-	94	43.602	Xiphophorus_maculatus