EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015019954 (Gene tree)
Gene ID: 108931822
Gene Symbol: lsm10
Alias: oscp1|zgc:171454
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 369 bases
Position: chrKV410964.1:13505-13873
Accession: 108931822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031116	LSM	PF01423.22	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031465	-	369	XM_018747844	ENSSFOP00015031116	122 (aa)	XP_018603360	A0A0P7T697

Gene Model

Click here to download ENSSFOG00015019954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015019954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015019954	lsm10	61	35.526	ENSSFOG00015006734	lsm2	68	37.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015019954	lsm10	100	63.934	ENSG00000181817	LSM10	99	63.934	Homo_sapiens
ENSSFOG00015019954	lsm10	99	67.769	ENSAMEG00000019854	LSM10	98	67.769	Ailuropoda_melanoleuca
ENSSFOG00015019954	lsm10	97	71.186	ENSACIG00000015420	oscp1a	78	71.186	Amphilophus_citrinellus
ENSSFOG00015019954	lsm10	97	76.271	ENSAOCG00000014654	-	98	76.271	Amphiprion_ocellaris
ENSSFOG00015019954	lsm10	97	76.271	ENSAOCG00000015618	LSM10	98	76.271	Amphiprion_ocellaris
ENSSFOG00015019954	lsm10	89	74.074	ENSAOCG00000015607	LSM10	84	74.074	Amphiprion_ocellaris
ENSSFOG00015019954	lsm10	97	76.271	ENSAPEG00000021845	-	98	76.271	Amphiprion_percula
ENSSFOG00015019954	lsm10	89	74.074	ENSAPEG00000021851	LSM10	84	74.074	Amphiprion_percula
ENSSFOG00015019954	lsm10	95	68.966	ENSATEG00000006310	oscp1a	86	68.966	Anabas_testudineus
ENSSFOG00015019954	lsm10	100	61.475	ENSACAG00000001231	LSM10	99	61.475	Anolis_carolinensis
ENSSFOG00015019954	lsm10	100	64.754	ENSANAG00000018759	-	99	64.754	Aotus_nancymaae
ENSSFOG00015019954	lsm10	100	63.115	ENSANAG00000031489	-	100	63.115	Aotus_nancymaae
ENSSFOG00015019954	lsm10	97	71.186	ENSACLG00000004728	oscp1a	96	71.186	Astatotilapia_calliptera
ENSSFOG00015019954	lsm10	95	70.690	ENSAMXG00000025301	oscp1a	96	70.690	Astyanax_mexicanus
ENSSFOG00015019954	lsm10	100	66.393	ENSBTAG00000024096	LSM10	100	66.393	Bos_taurus
ENSSFOG00015019954	lsm10	100	65.574	ENSCJAG00000044880	LSM10	99	65.574	Callithrix_jacchus
ENSSFOG00015019954	lsm10	99	67.769	ENSCAFG00000003382	LSM10	98	67.769	Canis_familiaris
ENSSFOG00015019954	lsm10	99	67.769	ENSCAFG00020008920	LSM10	98	67.769	Canis_lupus_dingo
ENSSFOG00015019954	lsm10	100	66.393	ENSCHIG00000009398	LSM10	100	66.393	Capra_hircus
ENSSFOG00015019954	lsm10	99	66.116	ENSCAPG00000012567	LSM10	98	66.116	Cavia_aperea
ENSSFOG00015019954	lsm10	99	66.116	ENSCPOG00000039302	LSM10	98	66.116	Cavia_porcellus
ENSSFOG00015019954	lsm10	100	62.295	ENSCCAG00000008378	-	99	62.295	Cebus_capucinus
ENSSFOG00015019954	lsm10	100	64.754	ENSCCAG00000018913	-	99	64.754	Cebus_capucinus
ENSSFOG00015019954	lsm10	99	63.636	ENSCATG00000006589	LSM10	98	63.636	Cercocebus_atys
ENSSFOG00015019954	lsm10	99	66.116	ENSCLAG00000008633	LSM10	98	66.116	Chinchilla_lanigera
ENSSFOG00015019954	lsm10	99	63.636	ENSCSAG00000000134	LSM10	98	63.636	Chlorocebus_sabaeus
ENSSFOG00015019954	lsm10	100	62.097	ENSCHOG00000008615	LSM10	99	62.097	Choloepus_hoffmanni
ENSSFOG00015019954	lsm10	76	34.409	ENSCING00000024984	-	81	34.409	Ciona_intestinalis
ENSSFOG00015019954	lsm10	83	32.673	ENSCSAVG00000001896	-	65	32.895	Ciona_savignyi
ENSSFOG00015019954	lsm10	99	63.636	ENSCANG00000019928	LSM10	98	63.636	Colobus_angolensis_palliatus
ENSSFOG00015019954	lsm10	99	65.289	ENSCGRG00001004317	-	99	65.289	Cricetulus_griseus_chok1gshd
ENSSFOG00015019954	lsm10	94	60.684	ENSCGRG00001022673	-	77	63.158	Cricetulus_griseus_chok1gshd
ENSSFOG00015019954	lsm10	94	60.684	ENSCGRG00000015514	-	77	63.158	Cricetulus_griseus_crigri
ENSSFOG00015019954	lsm10	99	65.289	ENSCGRG00000014935	-	99	65.289	Cricetulus_griseus_crigri
ENSSFOG00015019954	lsm10	98	66.667	ENSCSEG00000010374	oscp1a	81	66.667	Cynoglossus_semilaevis
ENSSFOG00015019954	lsm10	98	66.387	ENSCVAG00000001536	oscp1a	89	66.949	Cyprinodon_variegatus
ENSSFOG00015019954	lsm10	69	70.588	ENSDARG00000109563	CABZ01074453.1	100	70.588	Danio_rerio
ENSSFOG00015019954	lsm10	100	70.492	ENSDARG00000101222	oscp1a	100	71.074	Danio_rerio
ENSSFOG00015019954	lsm10	99	66.116	ENSDNOG00000036662	LSM10	98	66.116	Dasypus_novemcinctus
ENSSFOG00015019954	lsm10	99	65.289	ENSDORG00000007579	Lsm10	98	65.289	Dipodomys_ordii
ENSSFOG00015019954	lsm10	99	65.289	ENSETEG00000005703	LSM10	98	65.289	Echinops_telfairi
ENSSFOG00015019954	lsm10	96	48.718	ENSEBUG00000001312	oscp1a	96	48.718	Eptatretus_burgeri
ENSSFOG00015019954	lsm10	99	66.942	ENSEASG00005012194	LSM10	98	66.942	Equus_asinus_asinus
ENSSFOG00015019954	lsm10	99	66.942	ENSECAG00000005071	LSM10	98	66.942	Equus_caballus
ENSSFOG00015019954	lsm10	99	66.116	ENSEEUG00000012032	LSM10	98	66.116	Erinaceus_europaeus
ENSSFOG00015019954	lsm10	100	73.770	ENSELUG00000007452	oscp1a	100	73.770	Esox_lucius
ENSSFOG00015019954	lsm10	99	66.116	ENSFALG00000000851	LSM10	98	66.116	Ficedula_albicollis
ENSSFOG00015019954	lsm10	99	66.942	ENSFDAG00000021056	LSM10	98	66.942	Fukomys_damarensis
ENSSFOG00015019954	lsm10	91	74.107	ENSFHEG00000001058	oscp1a	96	74.775	Fundulus_heteroclitus
ENSSFOG00015019954	lsm10	97	66.949	ENSGMOG00000019832	oscp1a	99	66.949	Gadus_morhua
ENSSFOG00015019954	lsm10	99	68.595	ENSGALG00000002127	LSM10	98	68.595	Gallus_gallus
ENSSFOG00015019954	lsm10	89	69.444	ENSGAFG00000016445	oscp1a	78	68.750	Gambusia_affinis
ENSSFOG00015019954	lsm10	98	72.269	ENSGACG00000002329	oscp1a	98	72.269	Gasterosteus_aculeatus
ENSSFOG00015019954	lsm10	97	66.102	ENSGAGG00000024848	LSM10	96	66.102	Gopherus_agassizii
ENSSFOG00015019954	lsm10	100	63.934	ENSGGOG00000003556	LSM10	99	63.934	Gorilla_gorilla
ENSSFOG00015019954	lsm10	97	72.034	ENSHBUG00000001722	oscp1a	96	72.034	Haplochromis_burtoni
ENSSFOG00015019954	lsm10	99	64.463	ENSHGLG00000011625	LSM10	98	64.463	Heterocephalus_glaber_female
ENSSFOG00015019954	lsm10	99	64.463	ENSHGLG00100001769	LSM10	98	64.463	Heterocephalus_glaber_male
ENSSFOG00015019954	lsm10	87	71.698	ENSIPUG00000005808	oscp1a	92	71.698	Ictalurus_punctatus
ENSSFOG00015019954	lsm10	99	66.942	ENSSTOG00000000606	LSM10	98	66.942	Ictidomys_tridecemlineatus
ENSSFOG00015019954	lsm10	97	72.881	ENSKMAG00000012143	oscp1a	98	72.881	Kryptolebias_marmoratus
ENSSFOG00015019954	lsm10	92	68.750	ENSLBEG00000017764	oscp1a	98	65.833	Labrus_bergylta
ENSSFOG00015019954	lsm10	99	62.810	ENSLACG00000015904	LSM10	93	62.810	Latimeria_chalumnae
ENSSFOG00015019954	lsm10	98	68.333	ENSLOCG00000018277	oscp1a	98	68.333	Lepisosteus_oculatus
ENSSFOG00015019954	lsm10	99	64.463	ENSLAFG00000009600	LSM10	98	64.463	Loxodonta_africana
ENSSFOG00015019954	lsm10	99	63.636	ENSMFAG00000009115	LSM10	98	63.636	Macaca_fascicularis
ENSSFOG00015019954	lsm10	99	63.636	ENSMMUG00000017338	LSM10	98	63.636	Macaca_mulatta
ENSSFOG00015019954	lsm10	99	63.636	ENSMNEG00000020023	LSM10	98	63.636	Macaca_nemestrina
ENSSFOG00015019954	lsm10	99	63.636	ENSMLEG00000025150	LSM10	98	63.636	Mandrillus_leucophaeus
ENSSFOG00015019954	lsm10	98	70.833	ENSMAMG00000004427	oscp1a	98	70.833	Mastacembelus_armatus
ENSSFOG00015019954	lsm10	97	71.186	ENSMZEG00005026307	oscp1a	96	71.186	Maylandia_zebra
ENSSFOG00015019954	lsm10	99	68.595	ENSMGAG00000015707	LSM10	98	68.595	Meleagris_gallopavo
ENSSFOG00015019954	lsm10	99	64.463	ENSMAUG00000016624	Lsm10	99	64.463	Mesocricetus_auratus
ENSSFOG00015019954	lsm10	99	65.289	ENSMOCG00000021943	Lsm10	99	65.289	Microtus_ochrogaster
ENSSFOG00015019954	lsm10	94	72.174	ENSMMOG00000013597	oscp1a	86	72.174	Mola_mola
ENSSFOG00015019954	lsm10	99	68.595	ENSMODG00000023328	LSM10	98	68.595	Monodelphis_domestica
ENSSFOG00015019954	lsm10	62	60.920	ENSMALG00000012661	oscp1a	69	60.920	Monopterus_albus
ENSSFOG00015019954	lsm10	100	64.754	MGP_CAROLIEiJ_G0026467	Lsm10	100	67.742	Mus_caroli
ENSSFOG00015019954	lsm10	100	64.754	ENSMUSG00000050188	Lsm10	100	67.742	Mus_musculus
ENSSFOG00015019954	lsm10	100	64.754	MGP_PahariEiJ_G0028798	Lsm10	100	67.742	Mus_pahari
ENSSFOG00015019954	lsm10	100	64.754	MGP_SPRETEiJ_G0027446	Lsm10	100	67.742	Mus_spretus
ENSSFOG00015019954	lsm10	99	67.769	ENSMPUG00000018593	LSM10	98	67.769	Mustela_putorius_furo
ENSSFOG00015019954	lsm10	99	68.595	ENSMLUG00000023895	LSM10	98	68.595	Myotis_lucifugus
ENSSFOG00015019954	lsm10	99	63.636	ENSNGAG00000015011	Lsm10	98	63.636	Nannospalax_galili
ENSSFOG00015019954	lsm10	98	72.269	ENSNBRG00000014306	oscp1a	97	72.269	Neolamprologus_brichardi
ENSSFOG00015019954	lsm10	100	63.934	ENSNLEG00000033754	LSM10	99	63.934	Nomascus_leucogenys
ENSSFOG00015019954	lsm10	99	68.595	ENSMEUG00000006313	LSM10	98	68.595	Notamacropus_eugenii
ENSSFOG00015019954	lsm10	99	65.289	ENSOPRG00000001699	LSM10	98	65.289	Ochotona_princeps
ENSSFOG00015019954	lsm10	99	66.116	ENSODEG00000019161	LSM10	98	66.116	Octodon_degus
ENSSFOG00015019954	lsm10	98	72.500	ENSONIG00000020904	oscp1a	98	72.500	Oreochromis_niloticus
ENSSFOG00015019954	lsm10	100	68.852	ENSOANG00000002066	LSM10	99	68.852	Ornithorhynchus_anatinus
ENSSFOG00015019954	lsm10	99	64.463	ENSOCUG00000005333	LSM10	98	64.463	Oryctolagus_cuniculus
ENSSFOG00015019954	lsm10	98	71.429	ENSORLG00000009504	oscp1a	98	71.429	Oryzias_latipes
ENSSFOG00015019954	lsm10	98	71.429	ENSORLG00020016201	oscp1a	98	71.429	Oryzias_latipes_hni
ENSSFOG00015019954	lsm10	98	69.748	ENSORLG00015007794	oscp1a	98	69.748	Oryzias_latipes_hsok
ENSSFOG00015019954	lsm10	99	66.942	ENSOGAG00000002653	LSM10	98	66.942	Otolemur_garnettii
ENSSFOG00015019954	lsm10	100	66.393	ENSOARG00000009596	LSM10	100	66.393	Ovis_aries
ENSSFOG00015019954	lsm10	100	63.934	ENSPPAG00000023465	LSM10	99	63.934	Pan_paniscus
ENSSFOG00015019954	lsm10	99	66.942	ENSPPRG00000014619	LSM10	98	66.942	Panthera_pardus
ENSSFOG00015019954	lsm10	99	66.942	ENSPTIG00000004613	LSM10	98	66.942	Panthera_tigris_altaica
ENSSFOG00015019954	lsm10	100	63.934	ENSPTRG00000000539	LSM10	99	63.934	Pan_troglodytes
ENSSFOG00015019954	lsm10	99	63.636	ENSPANG00000023172	LSM10	98	63.636	Papio_anubis
ENSSFOG00015019954	lsm10	98	74.167	ENSPKIG00000003728	oscp1a	97	74.167	Paramormyrops_kingsleyae
ENSSFOG00015019954	lsm10	99	63.636	ENSPSIG00000000590	LSM10	98	63.636	Pelodiscus_sinensis
ENSSFOG00015019954	lsm10	63	74.026	ENSPMGG00000015718	oscp1a	100	74.026	Periophthalmus_magnuspinnatus
ENSSFOG00015019954	lsm10	99	61.983	ENSPCIG00000014865	LSM10	86	61.983	Phascolarctos_cinereus
ENSSFOG00015019954	lsm10	93	75.439	ENSPFOG00000020490	oscp1a	97	75.439	Poecilia_formosa
ENSSFOG00015019954	lsm10	98	72.269	ENSPLAG00000016537	oscp1a	91	72.269	Poecilia_latipinna
ENSSFOG00015019954	lsm10	91	74.775	ENSPMEG00000000174	oscp1a	97	74.775	Poecilia_mexicana
ENSSFOG00015019954	lsm10	98	73.950	ENSPREG00000009899	oscp1a	91	73.950	Poecilia_reticulata
ENSSFOG00015019954	lsm10	100	63.934	ENSPPYG00000001539	LSM10	99	63.934	Pongo_abelii
ENSSFOG00015019954	lsm10	98	64.167	ENSPCAG00000002520	LSM10	98	64.167	Procavia_capensis
ENSSFOG00015019954	lsm10	99	66.942	ENSPVAG00000008644	LSM10	98	66.942	Pteropus_vampyrus
ENSSFOG00015019954	lsm10	97	72.034	ENSPNYG00000003138	oscp1a	96	72.034	Pundamilia_nyererei
ENSSFOG00015019954	lsm10	96	72.650	ENSPNAG00000028829	oscp1a	97	72.650	Pygocentrus_nattereri
ENSSFOG00015019954	lsm10	100	63.934	ENSRNOG00000025716	Lsm10	100	63.934	Rattus_norvegicus
ENSSFOG00015019954	lsm10	99	63.636	ENSRBIG00000001561	LSM10	98	63.636	Rhinopithecus_bieti
ENSSFOG00015019954	lsm10	99	63.636	ENSRROG00000011414	LSM10	98	63.636	Rhinopithecus_roxellana
ENSSFOG00015019954	lsm10	100	64.754	ENSSBOG00000036413	-	99	64.754	Saimiri_boliviensis_boliviensis
ENSSFOG00015019954	lsm10	99	68.595	ENSSHAG00000018056	LSM10	98	68.595	Sarcophilus_harrisii
ENSSFOG00015019954	lsm10	94	73.913	ENSSMAG00000001297	oscp1a	98	73.913	Scophthalmus_maximus
ENSSFOG00015019954	lsm10	95	70.690	ENSSDUG00000007090	oscp1a	94	70.690	Seriola_dumerili
ENSSFOG00015019954	lsm10	95	71.552	ENSSLDG00000000800	oscp1a	96	71.552	Seriola_lalandi_dorsalis
ENSSFOG00015019954	lsm10	99	65.854	ENSSARG00000004211	LSM10	98	65.854	Sorex_araneus
ENSSFOG00015019954	lsm10	95	74.138	ENSSPAG00000009229	oscp1a	96	74.138	Stegastes_partitus
ENSSFOG00015019954	lsm10	100	66.393	ENSSSCG00000038916	LSM10	99	66.393	Sus_scrofa
ENSSFOG00015019954	lsm10	99	66.116	ENSTGUG00000001602	-	99	66.116	Taeniopygia_guttata
ENSSFOG00015019954	lsm10	99	65.289	ENSTGUG00000001600	-	99	65.289	Taeniopygia_guttata
ENSSFOG00015019954	lsm10	100	70.492	ENSTRUG00000010531	oscp1a	98	70.492	Takifugu_rubripes
ENSSFOG00015019954	lsm10	100	65.574	ENSTBEG00000016674	LSM10	99	65.574	Tupaia_belangeri
ENSSFOG00015019954	lsm10	99	68.595	ENSUAMG00000020265	LSM10	98	68.595	Ursus_americanus
ENSSFOG00015019954	lsm10	99	68.595	ENSUMAG00000001438	LSM10	56	68.595	Ursus_maritimus
ENSSFOG00015019954	lsm10	99	67.769	ENSVVUG00000023209	LSM10	98	67.769	Vulpes_vulpes
ENSSFOG00015019954	lsm10	100	68.033	ENSXETG00000027631	lsm10	99	68.033	Xenopus_tropicalis
ENSSFOG00015019954	lsm10	98	72.269	ENSXCOG00000018776	oscp1a	75	72.269	Xiphophorus_couchianus
ENSSFOG00015019954	lsm10	93	73.451	ENSXMAG00000019963	oscp1a	89	74.775	Xiphophorus_maculatus