EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015020000 (Gene tree)
Gene ID: 108941750
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 19951 bases
Position: chrKV411220.1:8111-28061
Accession: 108941750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031293	IBN_N	PF03810.19	5.5e-11	1	1
ENSSFOP00015031254	IBN_N	PF03810.19	6.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031645	-	2565	-	ENSSFOP00015031293	854 (aa)	-	-
ENSSFOT00015031606	-	5871	XM_018764560	ENSSFOP00015031254	876 (aa)	XP_018620076	A0A0P7VFW1

Gene Model

Click here to download ENSSFOG00015020000's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020000	kpnb1	100	93.607	ENSG00000108424	KPNB1	100	95.000	Homo_sapiens
ENSSFOG00015020000	kpnb1	100	98.174	ENSAPOG00000020572	kpnb1	100	98.174	Acanthochromis_polyacanthus
ENSSFOG00015020000	kpnb1	98	92.536	ENSAMEG00000004613	KPNB1	100	93.839	Ailuropoda_melanoleuca
ENSSFOG00015020000	kpnb1	98	98.014	ENSACIG00000023130	kpnb1	99	98.014	Amphilophus_citrinellus
ENSSFOG00015020000	kpnb1	100	98.174	ENSAOCG00000007048	kpnb1	100	98.174	Amphiprion_ocellaris
ENSSFOG00015020000	kpnb1	100	98.174	ENSAPEG00000008270	kpnb1	100	98.174	Amphiprion_percula
ENSSFOG00015020000	kpnb1	100	97.945	ENSATEG00000015139	kpnb1	100	97.945	Anabas_testudineus
ENSSFOG00015020000	kpnb1	98	92.189	ENSAPLG00000010177	KPNB1	96	93.491	Anas_platyrhynchos
ENSSFOG00015020000	kpnb1	100	94.064	ENSACAG00000007097	KPNB1	100	94.064	Anolis_carolinensis
ENSSFOG00015020000	kpnb1	100	90.868	ENSANAG00000024932	-	99	90.868	Aotus_nancymaae
ENSSFOG00015020000	kpnb1	100	97.831	ENSACLG00000015070	kpnb1	100	97.831	Astatotilapia_calliptera
ENSSFOG00015020000	kpnb1	100	97.032	ENSAMXG00000041903	kpnb1	100	97.032	Astyanax_mexicanus
ENSSFOG00015020000	kpnb1	100	93.950	ENSBTAG00000006586	KPNB1	100	93.950	Bos_taurus
ENSSFOG00015020000	kpnb1	99	48.529	WBGene00002075	imb-1	98	48.529	Caenorhabditis_elegans
ENSSFOG00015020000	kpnb1	100	93.721	ENSCJAG00000007834	KPNB1	100	93.721	Callithrix_jacchus
ENSSFOG00015020000	kpnb1	100	93.950	ENSCAFG00000016678	KPNB1	100	93.950	Canis_familiaris
ENSSFOG00015020000	kpnb1	100	93.950	ENSCAFG00020023205	KPNB1	100	93.950	Canis_lupus_dingo
ENSSFOG00015020000	kpnb1	100	93.950	ENSCHIG00000014896	KPNB1	100	93.950	Capra_hircus
ENSSFOG00015020000	kpnb1	100	92.009	ENSTSYG00000014472	KPNB1	99	92.009	Carlito_syrichta
ENSSFOG00015020000	kpnb1	98	92.764	ENSCAPG00000014185	KPNB1	100	94.069	Cavia_aperea
ENSSFOG00015020000	kpnb1	100	93.950	ENSCPOG00000006566	KPNB1	100	93.950	Cavia_porcellus
ENSSFOG00015020000	kpnb1	100	86.961	ENSCCAG00000029263	-	99	86.961	Cebus_capucinus
ENSSFOG00015020000	kpnb1	97	79.930	ENSCCAG00000018551	-	100	79.930	Cebus_capucinus
ENSSFOG00015020000	kpnb1	100	93.607	ENSCATG00000037124	KPNB1	100	93.607	Cercocebus_atys
ENSSFOG00015020000	kpnb1	100	93.836	ENSCLAG00000017091	KPNB1	100	93.836	Chinchilla_lanigera
ENSSFOG00015020000	kpnb1	100	93.607	ENSCSAG00000002605	KPNB1	100	93.607	Chlorocebus_sabaeus
ENSSFOG00015020000	kpnb1	73	88.679	ENSCHOG00000010604	KPNB1	73	88.679	Choloepus_hoffmanni
ENSSFOG00015020000	kpnb1	99	94.438	ENSCPBG00000027423	KPNB1	94	94.438	Chrysemys_picta_bellii
ENSSFOG00015020000	kpnb1	99	65.564	ENSCING00000004639	-	99	65.564	Ciona_intestinalis
ENSSFOG00015020000	kpnb1	100	62.712	ENSCSAVG00000008624	-	100	62.712	Ciona_savignyi
ENSSFOG00015020000	kpnb1	96	94.619	ENSCANG00000013489	KPNB1	100	94.619	Colobus_angolensis_palliatus
ENSSFOG00015020000	kpnb1	100	93.836	ENSCGRG00001016042	Kpnb1	100	93.836	Cricetulus_griseus_chok1gshd
ENSSFOG00015020000	kpnb1	98	92.654	ENSCGRG00000013910	Kpnb1	100	93.950	Cricetulus_griseus_crigri
ENSSFOG00015020000	kpnb1	99	92.958	ENSCSEG00000007991	kpnb1	100	94.249	Cynoglossus_semilaevis
ENSSFOG00015020000	kpnb1	100	96.918	ENSDARG00000104889	kpnb1	100	96.918	Danio_rerio
ENSSFOG00015020000	kpnb1	99	63.014	FBgn0262743	Fs(2)Ket	99	63.014	Drosophila_melanogaster
ENSSFOG00015020000	kpnb1	100	80.465	ENSEBUG00000013869	kpnb1	98	81.671	Eptatretus_burgeri
ENSSFOG00015020000	kpnb1	100	93.950	ENSEASG00005000805	KPNB1	100	93.950	Equus_asinus_asinus
ENSSFOG00015020000	kpnb1	100	93.950	ENSECAG00000014560	KPNB1	100	93.950	Equus_caballus
ENSSFOG00015020000	kpnb1	85	93.970	ENSEEUG00000005046	KPNB1	88	93.970	Erinaceus_europaeus
ENSSFOG00015020000	kpnb1	100	97.603	ENSELUG00000015847	kpnb1	100	97.603	Esox_lucius
ENSSFOG00015020000	kpnb1	100	93.950	ENSFCAG00000023994	KPNB1	100	93.950	Felis_catus
ENSSFOG00015020000	kpnb1	98	93.001	ENSFDAG00000019923	KPNB1	100	94.306	Fukomys_damarensis
ENSSFOG00015020000	kpnb1	100	97.260	ENSFHEG00000020199	kpnb1	100	97.260	Fundulus_heteroclitus
ENSSFOG00015020000	kpnb1	100	92.237	ENSGMOG00000011607	kpnb1	99	92.237	Gadus_morhua
ENSSFOG00015020000	kpnb1	100	93.950	ENSGALG00000036962	KPNB1	100	93.950	Gallus_gallus
ENSSFOG00015020000	kpnb1	100	96.918	ENSGAFG00000000783	kpnb1	100	96.918	Gambusia_affinis
ENSSFOG00015020000	kpnb1	100	93.107	ENSGACG00000014765	kpnb1	100	93.107	Gasterosteus_aculeatus
ENSSFOG00015020000	kpnb1	98	92.628	ENSGAGG00000023737	KPNB1	92	93.936	Gopherus_agassizii
ENSSFOG00015020000	kpnb1	100	93.607	ENSGGOG00000008089	KPNB1	100	93.607	Gorilla_gorilla
ENSSFOG00015020000	kpnb1	100	97.831	ENSHBUG00000016826	kpnb1	100	97.831	Haplochromis_burtoni
ENSSFOG00015020000	kpnb1	100	94.178	ENSHGLG00000014138	KPNB1	100	94.178	Heterocephalus_glaber_female
ENSSFOG00015020000	kpnb1	98	93.009	ENSHGLG00100006572	KPNB1	100	94.306	Heterocephalus_glaber_male
ENSSFOG00015020000	kpnb1	100	94.292	ENSHCOG00000002084	kpnb1	100	94.292	Hippocampus_comes
ENSSFOG00015020000	kpnb1	99	92.121	ENSIPUG00000012402	kpnb1	95	92.121	Ictalurus_punctatus
ENSSFOG00015020000	kpnb1	100	93.950	ENSSTOG00000007896	KPNB1	100	93.950	Ictidomys_tridecemlineatus
ENSSFOG00015020000	kpnb1	100	93.836	ENSJJAG00000010909	Kpnb1	100	93.836	Jaculus_jaculus
ENSSFOG00015020000	kpnb1	100	97.032	ENSKMAG00000001547	kpnb1	100	97.032	Kryptolebias_marmoratus
ENSSFOG00015020000	kpnb1	99	97.463	ENSLBEG00000025794	kpnb1	99	95.673	Labrus_bergylta
ENSSFOG00015020000	kpnb1	88	93.515	ENSLACG00000017620	KPNB1	99	93.515	Latimeria_chalumnae
ENSSFOG00015020000	kpnb1	100	98.402	ENSLOCG00000013753	kpnb1	100	98.402	Lepisosteus_oculatus
ENSSFOG00015020000	kpnb1	100	88.927	ENSLAFG00000001328	KPNB1	100	88.927	Loxodonta_africana
ENSSFOG00015020000	kpnb1	100	91.047	ENSMFAG00000030197	KPNB1	100	93.713	Macaca_fascicularis
ENSSFOG00015020000	kpnb1	100	91.638	ENSMMUG00000019760	KPNB1	99	92.114	Macaca_mulatta
ENSSFOG00015020000	kpnb1	100	93.607	ENSMNEG00000040927	KPNB1	100	93.607	Macaca_nemestrina
ENSSFOG00015020000	kpnb1	100	91.210	ENSMLEG00000038185	KPNB1	99	91.210	Mandrillus_leucophaeus
ENSSFOG00015020000	kpnb1	100	98.288	ENSMAMG00000011036	kpnb1	100	98.288	Mastacembelus_armatus
ENSSFOG00015020000	kpnb1	100	97.831	ENSMZEG00005004564	kpnb1	100	97.831	Maylandia_zebra
ENSSFOG00015020000	kpnb1	55	93.582	ENSMGAG00000002770	-	100	93.582	Meleagris_gallopavo
ENSSFOG00015020000	kpnb1	100	93.836	ENSMAUG00000006211	Kpnb1	100	93.836	Mesocricetus_auratus
ENSSFOG00015020000	kpnb1	100	93.950	ENSMICG00000012059	KPNB1	84	93.950	Microcebus_murinus
ENSSFOG00015020000	kpnb1	100	93.836	ENSMOCG00000003683	Kpnb1	100	93.836	Microtus_ochrogaster
ENSSFOG00015020000	kpnb1	100	94.521	ENSMODG00000012505	KPNB1	100	94.521	Monodelphis_domestica
ENSSFOG00015020000	kpnb1	100	98.288	ENSMALG00000000863	kpnb1	100	98.288	Monopterus_albus
ENSSFOG00015020000	kpnb1	94	94.039	MGP_CAROLIEiJ_G0017050	Kpnb1	100	94.039	Mus_caroli
ENSSFOG00015020000	kpnb1	100	93.721	ENSMUSG00000001440	Kpnb1	100	93.721	Mus_musculus
ENSSFOG00015020000	kpnb1	100	92.930	ENSMPUG00000015220	KPNB1	100	92.930	Mustela_putorius_furo
ENSSFOG00015020000	kpnb1	100	89.066	ENSMLUG00000014522	KPNB1	100	89.066	Myotis_lucifugus
ENSSFOG00015020000	kpnb1	98	92.654	ENSNGAG00000017610	Kpnb1	100	93.950	Nannospalax_galili
ENSSFOG00015020000	kpnb1	100	97.831	ENSNBRG00000019305	kpnb1	100	97.831	Neolamprologus_brichardi
ENSSFOG00015020000	kpnb1	100	93.607	ENSNLEG00000001446	KPNB1	100	93.607	Nomascus_leucogenys
ENSSFOG00015020000	kpnb1	100	88.927	ENSMEUG00000014284	KPNB1	100	88.927	Notamacropus_eugenii
ENSSFOG00015020000	kpnb1	100	93.836	ENSODEG00000017287	KPNB1	100	93.836	Octodon_degus
ENSSFOG00015020000	kpnb1	100	97.831	ENSONIG00000009269	kpnb1	100	97.831	Oreochromis_niloticus
ENSSFOG00015020000	kpnb1	100	93.950	ENSOCUG00000015425	KPNB1	100	93.950	Oryctolagus_cuniculus
ENSSFOG00015020000	kpnb1	100	97.489	ENSORLG00000019936	kpnb1	100	97.489	Oryzias_latipes
ENSSFOG00015020000	kpnb1	100	97.489	ENSORLG00020021181	kpnb1	100	97.489	Oryzias_latipes_hni
ENSSFOG00015020000	kpnb1	100	97.374	ENSORLG00015012177	kpnb1	100	97.374	Oryzias_latipes_hsok
ENSSFOG00015020000	kpnb1	100	97.603	ENSOMEG00000021022	kpnb1	100	97.603	Oryzias_melastigma
ENSSFOG00015020000	kpnb1	100	93.836	ENSOGAG00000006153	KPNB1	100	93.836	Otolemur_garnettii
ENSSFOG00015020000	kpnb1	99	91.920	ENSOARG00000008469	KPNB1	99	93.208	Ovis_aries
ENSSFOG00015020000	kpnb1	100	93.607	ENSPPAG00000028842	KPNB1	100	93.607	Pan_paniscus
ENSSFOG00015020000	kpnb1	99	92.453	ENSPPRG00000022879	KPNB1	97	93.743	Panthera_pardus
ENSSFOG00015020000	kpnb1	99	92.453	ENSPTIG00000006870	KPNB1	97	93.743	Panthera_tigris_altaica
ENSSFOG00015020000	kpnb1	100	93.607	ENSPTRG00000009333	KPNB1	100	93.607	Pan_troglodytes
ENSSFOG00015020000	kpnb1	100	93.607	ENSPANG00000022099	KPNB1	100	93.607	Papio_anubis
ENSSFOG00015020000	kpnb1	100	98.288	ENSPKIG00000017563	kpnb1	100	98.288	Paramormyrops_kingsleyae
ENSSFOG00015020000	kpnb1	98	93.238	ENSPSIG00000009775	KPNB1	100	94.543	Pelodiscus_sinensis
ENSSFOG00015020000	kpnb1	100	89.966	ENSPMGG00000001041	kpnb1	93	89.966	Periophthalmus_magnuspinnatus
ENSSFOG00015020000	kpnb1	100	93.836	ENSPEMG00000017783	Kpnb1	100	93.836	Peromyscus_maniculatus_bairdii
ENSSFOG00015020000	kpnb1	99	85.535	ENSPMAG00000007117	kpnb1	99	85.535	Petromyzon_marinus
ENSSFOG00015020000	kpnb1	100	94.521	ENSPCIG00000001034	KPNB1	100	94.521	Phascolarctos_cinereus
ENSSFOG00015020000	kpnb1	100	96.918	ENSPFOG00000009014	kpnb1	100	96.918	Poecilia_formosa
ENSSFOG00015020000	kpnb1	100	96.918	ENSPLAG00000010922	kpnb1	100	96.918	Poecilia_latipinna
ENSSFOG00015020000	kpnb1	100	96.918	ENSPREG00000012268	kpnb1	100	96.918	Poecilia_reticulata
ENSSFOG00015020000	kpnb1	100	93.151	ENSPPYG00000025935	KPNB1	100	93.151	Pongo_abelii
ENSSFOG00015020000	kpnb1	70	98.347	ENSPCAG00000002526	KPNB1	71	98.347	Procavia_capensis
ENSSFOG00015020000	kpnb1	100	93.950	ENSPCOG00000026259	KPNB1	100	93.950	Propithecus_coquereli
ENSSFOG00015020000	kpnb1	100	93.493	ENSPVAG00000004910	KPNB1	100	93.493	Pteropus_vampyrus
ENSSFOG00015020000	kpnb1	100	93.450	ENSPNYG00000017703	kpnb1	96	98.087	Pundamilia_nyererei
ENSSFOG00015020000	kpnb1	99	88.966	ENSPNAG00000024047	kpnb1	98	88.966	Pygocentrus_nattereri
ENSSFOG00015020000	kpnb1	100	93.721	ENSRNOG00000009275	Kpnb1	100	93.721	Rattus_norvegicus
ENSSFOG00015020000	kpnb1	100	93.493	ENSRBIG00000002254	KPNB1	99	93.493	Rhinopithecus_bieti
ENSSFOG00015020000	kpnb1	100	92.326	ENSRROG00000030419	KPNB1	99	93.072	Rhinopithecus_roxellana
ENSSFOG00015020000	kpnb1	99	34.016	YLR347C	KAP95	99	34.016	Saccharomyces_cerevisiae
ENSSFOG00015020000	kpnb1	100	93.607	ENSSBOG00000030025	KPNB1	94	93.607	Saimiri_boliviensis_boliviensis
ENSSFOG00015020000	kpnb1	98	93.034	ENSSHAG00000018214	KPNB1	100	94.333	Sarcophilus_harrisii
ENSSFOG00015020000	kpnb1	100	98.516	ENSSDUG00000016218	kpnb1	100	98.516	Seriola_dumerili
ENSSFOG00015020000	kpnb1	98	98.485	ENSSLDG00000021549	kpnb1	97	98.485	Seriola_lalandi_dorsalis
ENSSFOG00015020000	kpnb1	100	93.836	ENSSPUG00000017799	KPNB1	100	93.836	Sphenodon_punctatus
ENSSFOG00015020000	kpnb1	100	98.059	ENSSPAG00000019346	kpnb1	100	98.059	Stegastes_partitus
ENSSFOG00015020000	kpnb1	100	93.950	ENSSSCG00000017514	KPNB1	100	93.950	Sus_scrofa
ENSSFOG00015020000	kpnb1	98	87.663	ENSTGUG00000003387	KPNB1	100	88.968	Taeniopygia_guttata
ENSSFOG00015020000	kpnb1	100	95.205	ENSTRUG00000000542	kpnb1	100	95.205	Takifugu_rubripes
ENSSFOG00015020000	kpnb1	100	95.890	ENSTNIG00000006494	kpnb1	100	95.890	Tetraodon_nigroviridis
ENSSFOG00015020000	kpnb1	98	92.883	ENSTTRG00000004682	KPNB1	100	94.187	Tursiops_truncatus
ENSSFOG00015020000	kpnb1	100	93.950	ENSUAMG00000025344	KPNB1	99	93.950	Ursus_americanus
ENSSFOG00015020000	kpnb1	99	92.453	ENSUMAG00000016471	KPNB1	98	92.791	Ursus_maritimus
ENSSFOG00015020000	kpnb1	100	80.251	ENSVPAG00000003675	KPNB1	100	80.251	Vicugna_pacos
ENSSFOG00015020000	kpnb1	100	93.950	ENSVVUG00000003085	KPNB1	100	93.950	Vulpes_vulpes
ENSSFOG00015020000	kpnb1	100	93.265	ENSXETG00000014717	kpnb1	100	93.265	Xenopus_tropicalis
ENSSFOG00015020000	kpnb1	100	96.918	ENSXMAG00000018792	kpnb1	100	96.918	Xiphophorus_maculatus