EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020017 (Gene tree)
Gene ID: 108923980
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 19257 bases
Position: chrKV410831.1:593178-612434
Accession: 108923980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031268	PARP	PF00644.20	4.9e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031619	-	4162	XM_018735057	ENSSFOP00015031268	1013 (aa)	XP_018590573	A0A1W4YQC1

Gene Model

Click here to download ENSSFOG00015020017's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03410	Base excision repair	KEGG
sfm04210	Apoptosis	KEGG
sfm04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020017	parp1	51	42.722	ENSSFOG00015012443	parp2	94	42.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020017	parp1	100	70.732	ENSG00000143799	PARP1	100	70.732	Homo_sapiens
ENSSFOG00015020017	parp1	100	81.908	ENSAPOG00000006414	parp1	100	81.908	Acanthochromis_polyacanthus
ENSSFOG00015020017	parp1	99	69.939	ENSAMEG00000014451	PARP1	100	70.344	Ailuropoda_melanoleuca
ENSSFOG00015020017	parp1	100	82.417	ENSACIG00000005651	parp1	100	82.185	Amphilophus_citrinellus
ENSSFOG00015020017	parp1	100	82.104	ENSAOCG00000021005	parp1	100	82.104	Amphiprion_ocellaris
ENSSFOG00015020017	parp1	100	82.104	ENSAPEG00000004784	parp1	100	82.104	Amphiprion_percula
ENSSFOG00015020017	parp1	100	81.613	ENSATEG00000010457	parp1	100	81.613	Anabas_testudineus
ENSSFOG00015020017	parp1	87	73.016	ENSAPLG00000014039	PARP1	99	73.016	Anas_platyrhynchos
ENSSFOG00015020017	parp1	99	72.261	ENSACAG00000006189	PARP1	99	72.359	Anolis_carolinensis
ENSSFOG00015020017	parp1	100	70.204	ENSANAG00000032699	PARP1	100	70.548	Aotus_nancymaae
ENSSFOG00015020017	parp1	100	83.169	ENSACLG00000015489	parp1	100	82.840	Astatotilapia_calliptera
ENSSFOG00015020017	parp1	100	83.056	ENSAMXG00000006465	parp1	100	83.741	Astyanax_mexicanus
ENSSFOG00015020017	parp1	100	68.524	ENSBTAG00000000837	PARP1	100	68.524	Bos_taurus
ENSSFOG00015020017	parp1	82	43.825	WBGene00004049	parp-1	100	45.833	Caenorhabditis_elegans
ENSSFOG00015020017	parp1	100	70.254	ENSCJAG00000012831	PARP1	100	70.352	Callithrix_jacchus
ENSSFOG00015020017	parp1	96	69.254	ENSCAFG00000016089	PARP1	100	70.072	Canis_familiaris
ENSSFOG00015020017	parp1	100	70.352	ENSCAFG00020001660	PARP1	100	70.548	Canis_lupus_dingo
ENSSFOG00015020017	parp1	100	69.050	ENSCHIG00000018072	PARP1	100	69.050	Capra_hircus
ENSSFOG00015020017	parp1	91	70.455	ENSTSYG00000003699	PARP1	100	70.563	Carlito_syrichta
ENSSFOG00015020017	parp1	99	59.293	ENSCAPG00000011113	-	99	58.983	Cavia_aperea
ENSSFOG00015020017	parp1	100	70.428	ENSCPOG00000015643	-	100	70.428	Cavia_porcellus
ENSSFOG00015020017	parp1	100	70.646	ENSCCAG00000033484	PARP1	100	70.646	Cebus_capucinus
ENSSFOG00015020017	parp1	100	70.136	ENSCATG00000038981	PARP1	100	70.136	Cercocebus_atys
ENSSFOG00015020017	parp1	99	70.334	ENSCLAG00000006637	PARP1	99	70.432	Chinchilla_lanigera
ENSSFOG00015020017	parp1	66	80.469	ENSCHOG00000003539	PARP1	59	80.469	Choloepus_hoffmanni
ENSSFOG00015020017	parp1	99	73.281	ENSCPBG00000011958	PARP1	99	72.986	Chrysemys_picta_bellii
ENSSFOG00015020017	parp1	99	69.807	ENSCANG00000041340	PARP1	100	69.807	Colobus_angolensis_palliatus
ENSSFOG00015020017	parp1	100	69.961	ENSCGRG00001020559	Parp1	100	70.157	Cricetulus_griseus_chok1gshd
ENSSFOG00015020017	parp1	99	69.725	ENSCGRG00000004864	Parp1	100	69.929	Cricetulus_griseus_crigri
ENSSFOG00015020017	parp1	100	80.667	ENSCSEG00000020665	parp1	100	80.765	Cynoglossus_semilaevis
ENSSFOG00015020017	parp1	99	81.263	ENSCVAG00000021372	parp1	99	81.161	Cyprinodon_variegatus
ENSSFOG00015020017	parp1	100	83.056	ENSDARG00000019529	parp1	100	83.121	Danio_rerio
ENSSFOG00015020017	parp1	99	68.744	ENSDNOG00000012059	PARP1	100	68.846	Dasypus_novemcinctus
ENSSFOG00015020017	parp1	99	69.074	ENSDORG00000005234	Parp1	100	69.583	Dipodomys_ordii
ENSSFOG00015020017	parp1	99	42.266	FBgn0010247	Parp	99	42.308	Drosophila_melanogaster
ENSSFOG00015020017	parp1	87	80.469	ENSETEG00000013254	PARP1	88	80.469	Echinops_telfairi
ENSSFOG00015020017	parp1	97	59.443	ENSEBUG00000005820	parp1	100	59.397	Eptatretus_burgeri
ENSSFOG00015020017	parp1	98	70.418	ENSEASG00005013275	PARP1	99	70.647	Equus_asinus_asinus
ENSSFOG00015020017	parp1	100	70.020	ENSECAG00000019207	PARP1	100	70.605	Equus_caballus
ENSSFOG00015020017	parp1	100	67.937	ENSEEUG00000012253	PARP1	100	67.515	Erinaceus_europaeus
ENSSFOG00015020017	parp1	99	83.577	ENSELUG00000017336	parp1	100	82.185	Esox_lucius
ENSSFOG00015020017	parp1	97	69.697	ENSFCAG00000005777	PARP1	100	69.899	Felis_catus
ENSSFOG00015020017	parp1	99	73.340	ENSFALG00000011578	PARP1	100	73.953	Ficedula_albicollis
ENSSFOG00015020017	parp1	99	68.871	ENSFDAG00000017662	PARP1	100	68.973	Fukomys_damarensis
ENSSFOG00015020017	parp1	100	81.532	ENSFHEG00000001117	parp1	100	81.336	Fundulus_heteroclitus
ENSSFOG00015020017	parp1	99	80.473	ENSGMOG00000014929	parp1	100	80.906	Gadus_morhua
ENSSFOG00015020017	parp1	99	73.814	ENSGALG00000009228	PARP1	99	73.913	Gallus_gallus
ENSSFOG00015020017	parp1	100	81.569	ENSGAFG00000010450	parp1	100	81.667	Gambusia_affinis
ENSSFOG00015020017	parp1	100	81.158	ENSGACG00000011280	parp1	100	81.256	Gasterosteus_aculeatus
ENSSFOG00015020017	parp1	99	73.445	ENSGAGG00000010066	PARP1	99	73.149	Gopherus_agassizii
ENSSFOG00015020017	parp1	100	70.439	ENSGGOG00000006308	PARP1	100	70.439	Gorilla_gorilla
ENSSFOG00015020017	parp1	100	82.958	ENSHBUG00000010490	parp1	100	82.728	Haplochromis_burtoni
ENSSFOG00015020017	parp1	96	68.832	ENSHGLG00000003992	PARP1	93	68.902	Heterocephalus_glaber_female
ENSSFOG00015020017	parp1	96	68.801	ENSHGLG00100016965	PARP1	93	68.902	Heterocephalus_glaber_male
ENSSFOG00015020017	parp1	100	79.024	ENSHCOG00000011619	parp1	100	79.961	Hippocampus_comes
ENSSFOG00015020017	parp1	100	83.024	ENSIPUG00000020250	parp1	100	82.829	Ictalurus_punctatus
ENSSFOG00015020017	parp1	100	70.732	ENSSTOG00000016000	PARP1	100	70.732	Ictidomys_tridecemlineatus
ENSSFOG00015020017	parp1	100	69.582	ENSJJAG00000023497	Parp1	100	70.392	Jaculus_jaculus
ENSSFOG00015020017	parp1	100	80.747	ENSKMAG00000011627	parp1	100	80.845	Kryptolebias_marmoratus
ENSSFOG00015020017	parp1	100	82.283	ENSLBEG00000013376	parp1	100	82.283	Labrus_bergylta
ENSSFOG00015020017	parp1	99	56.893	ENSLACG00000002735	PARP1	99	57.522	Latimeria_chalumnae
ENSSFOG00015020017	parp1	100	81.649	ENSLOCG00000015798	parp1	100	82.434	Lepisosteus_oculatus
ENSSFOG00015020017	parp1	99	68.598	ENSLAFG00000007830	PARP1	100	68.801	Loxodonta_africana
ENSSFOG00015020017	parp1	100	70.136	ENSMFAG00000002526	PARP1	100	70.136	Macaca_fascicularis
ENSSFOG00015020017	parp1	100	70.233	ENSMMUG00000021820	PARP1	100	70.233	Macaca_mulatta
ENSSFOG00015020017	parp1	100	70.233	ENSMNEG00000034074	PARP1	100	70.233	Macaca_nemestrina
ENSSFOG00015020017	parp1	100	68.380	ENSMLEG00000012344	PARP1	100	68.380	Mandrillus_leucophaeus
ENSSFOG00015020017	parp1	100	82.857	ENSMAMG00000020652	parp1	100	82.857	Mastacembelus_armatus
ENSSFOG00015020017	parp1	100	83.252	ENSMZEG00005016907	parp1	100	82.924	Maylandia_zebra
ENSSFOG00015020017	parp1	99	73.361	ENSMGAG00000007760	PARP1	100	73.361	Meleagris_gallopavo
ENSSFOG00015020017	parp1	100	69.765	ENSMAUG00000008306	Parp1	100	69.961	Mesocricetus_auratus
ENSSFOG00015020017	parp1	99	67.485	ENSMICG00000017076	PARP1	99	67.583	Microcebus_murinus
ENSSFOG00015020017	parp1	100	69.667	ENSMOCG00000014315	Parp1	100	70.059	Microtus_ochrogaster
ENSSFOG00015020017	parp1	100	80.547	ENSMMOG00000015966	parp1	100	80.450	Mola_mola
ENSSFOG00015020017	parp1	99	71.105	ENSMODG00000006076	PARP1	99	71.499	Monodelphis_domestica
ENSSFOG00015020017	parp1	100	78.880	ENSMALG00000004057	parp1	100	78.782	Monopterus_albus
ENSSFOG00015020017	parp1	100	70.674	MGP_CAROLIEiJ_G0014978	Parp1	100	79.592	Mus_caroli
ENSSFOG00015020017	parp1	100	70.381	ENSMUSG00000026496	Parp1	99	79.592	Mus_musculus
ENSSFOG00015020017	parp1	100	70.381	MGP_SPRETEiJ_G0015777	Parp1	100	79.592	Mus_spretus
ENSSFOG00015020017	parp1	100	70.461	ENSMPUG00000004585	PARP1	100	70.952	Mustela_putorius_furo
ENSSFOG00015020017	parp1	90	59.096	ENSMLUG00000012285	PARP1	100	59.311	Myotis_lucifugus
ENSSFOG00015020017	parp1	100	69.268	ENSNGAG00000003885	Parp1	100	69.472	Nannospalax_galili
ENSSFOG00015020017	parp1	100	82.972	ENSNBRG00000017434	parp1	100	82.643	Neolamprologus_brichardi
ENSSFOG00015020017	parp1	97	73.558	ENSNLEG00000013905	PARP1	100	73.558	Nomascus_leucogenys
ENSSFOG00015020017	parp1	67	80.299	ENSMEUG00000007720	PARP1	87	80.299	Notamacropus_eugenii
ENSSFOG00015020017	parp1	100	70.911	ENSOPRG00000011722	PARP1	100	71.009	Ochotona_princeps
ENSSFOG00015020017	parp1	100	68.452	ENSODEG00000007424	PARP1	100	68.744	Octodon_degus
ENSSFOG00015020017	parp1	100	82.826	ENSONIG00000013486	parp1	100	82.793	Oreochromis_niloticus
ENSSFOG00015020017	parp1	99	72.449	ENSOANG00000001488	PARP1	100	72.449	Ornithorhynchus_anatinus
ENSSFOG00015020017	parp1	100	71.220	ENSOCUG00000017820	PARP1	100	71.707	Oryctolagus_cuniculus
ENSSFOG00015020017	parp1	100	80.747	ENSORLG00000013691	parp1	100	80.747	Oryzias_latipes
ENSSFOG00015020017	parp1	99	80.305	ENSORLG00020001074	parp1	99	80.305	Oryzias_latipes_hni
ENSSFOG00015020017	parp1	100	80.845	ENSORLG00015007090	parp1	100	80.845	Oryzias_latipes_hsok
ENSSFOG00015020017	parp1	100	70.363	ENSOGAG00000016206	PARP1	100	70.461	Otolemur_garnettii
ENSSFOG00015020017	parp1	100	68.719	ENSOARG00000000811	PARP1	100	68.817	Ovis_aries
ENSSFOG00015020017	parp1	100	70.341	ENSPPAG00000040862	PARP1	100	70.341	Pan_paniscus
ENSSFOG00015020017	parp1	96	69.817	ENSPPRG00000003528	PARP1	100	70.020	Panthera_pardus
ENSSFOG00015020017	parp1	93	59.391	ENSPTIG00000009102	PARP1	98	60.042	Panthera_tigris_altaica
ENSSFOG00015020017	parp1	100	70.341	ENSPTRG00000002049	PARP1	100	70.341	Pan_troglodytes
ENSSFOG00015020017	parp1	100	70.262	ENSPANG00000011198	PARP1	100	70.262	Papio_anubis
ENSSFOG00015020017	parp1	100	87.870	ENSPKIG00000006039	parp1	100	88.067	Paramormyrops_kingsleyae
ENSSFOG00015020017	parp1	99	72.477	ENSPSIG00000016374	PARP1	100	72.783	Pelodiscus_sinensis
ENSSFOG00015020017	parp1	100	77.745	ENSPMGG00000008936	parp1	100	77.745	Periophthalmus_magnuspinnatus
ENSSFOG00015020017	parp1	100	70.479	ENSPEMG00000020230	Parp1	100	70.479	Peromyscus_maniculatus_bairdii
ENSSFOG00015020017	parp1	99	71.386	ENSPCIG00000006436	PARP1	99	71.878	Phascolarctos_cinereus
ENSSFOG00015020017	parp1	100	81.489	ENSPFOG00000002342	parp1	100	81.569	Poecilia_formosa
ENSSFOG00015020017	parp1	100	81.765	ENSPLAG00000000909	parp1	100	81.863	Poecilia_latipinna
ENSSFOG00015020017	parp1	100	81.961	ENSPMEG00000013979	parp1	100	82.059	Poecilia_mexicana
ENSSFOG00015020017	parp1	100	81.532	ENSPREG00000001114	parp1	100	81.631	Poecilia_reticulata
ENSSFOG00015020017	parp1	99	70.133	ENSPPYG00000000164	PARP1	100	70.133	Pongo_abelii
ENSSFOG00015020017	parp1	59	80.864	ENSPCAG00000005558	-	59	80.864	Procavia_capensis
ENSSFOG00015020017	parp1	99	70.739	ENSPCOG00000016918	PARP1	99	70.854	Propithecus_coquereli
ENSSFOG00015020017	parp1	92	78.302	ENSPVAG00000005543	PARP1	86	78.302	Pteropus_vampyrus
ENSSFOG00015020017	parp1	100	83.169	ENSPNYG00000009702	parp1	100	82.840	Pundamilia_nyererei
ENSSFOG00015020017	parp1	100	84.780	ENSPNAG00000002787	parp1	100	84.878	Pygocentrus_nattereri
ENSSFOG00015020017	parp1	100	70.186	ENSRNOG00000003084	Parp1	100	70.674	Rattus_norvegicus
ENSSFOG00015020017	parp1	100	70.233	ENSRBIG00000044893	PARP1	99	72.076	Rhinopithecus_bieti
ENSSFOG00015020017	parp1	99	53.208	ENSRROG00000040615	-	98	60.309	Rhinopithecus_roxellana
ENSSFOG00015020017	parp1	100	70.233	ENSRROG00000029280	PARP1	99	72.076	Rhinopithecus_roxellana
ENSSFOG00015020017	parp1	100	70.450	ENSSBOG00000010144	PARP1	100	70.450	Saimiri_boliviensis_boliviensis
ENSSFOG00015020017	parp1	99	70.757	ENSSHAG00000001991	PARP1	100	71.531	Sarcophilus_harrisii
ENSSFOG00015020017	parp1	100	82.014	ENSSMAG00000013799	parp1	100	82.014	Scophthalmus_maximus
ENSSFOG00015020017	parp1	100	82.104	ENSSDUG00000016626	parp1	100	82.104	Seriola_dumerili
ENSSFOG00015020017	parp1	100	81.908	ENSSLDG00000006384	parp1	100	81.908	Seriola_lalandi_dorsalis
ENSSFOG00015020017	parp1	53	77.778	ENSSARG00000009436	-	55	77.778	Sorex_araneus
ENSSFOG00015020017	parp1	100	68.658	ENSSPUG00000007790	PARP1	100	68.928	Sphenodon_punctatus
ENSSFOG00015020017	parp1	100	80.375	ENSSPAG00000019074	parp1	99	81.847	Stegastes_partitus
ENSSFOG00015020017	parp1	100	70.323	ENSSSCG00000023660	PARP1	100	70.617	Sus_scrofa
ENSSFOG00015020017	parp1	98	72.677	ENSTGUG00000004260	-	100	72.566	Taeniopygia_guttata
ENSSFOG00015020017	parp1	100	80.667	ENSTRUG00000014490	parp1	100	80.569	Takifugu_rubripes
ENSSFOG00015020017	parp1	100	79.844	ENSTNIG00000016384	parp1	100	79.649	Tetraodon_nigroviridis
ENSSFOG00015020017	parp1	83	77.866	ENSTBEG00000002364	PARP1	88	77.866	Tupaia_belangeri
ENSSFOG00015020017	parp1	100	65.264	ENSTTRG00000000188	PARP1	100	65.753	Tursiops_truncatus
ENSSFOG00015020017	parp1	96	70.265	ENSUAMG00000014388	PARP1	100	70.672	Ursus_americanus
ENSSFOG00015020017	parp1	96	63.841	ENSUMAG00000014555	PARP1	99	64.257	Ursus_maritimus
ENSSFOG00015020017	parp1	83	79.608	ENSVPAG00000011411	PARP1	83	79.608	Vicugna_pacos
ENSSFOG00015020017	parp1	96	69.254	ENSVVUG00000001655	PARP1	100	69.969	Vulpes_vulpes
ENSSFOG00015020017	parp1	98	71.271	ENSXETG00000022610	parp1	99	70.705	Xenopus_tropicalis
ENSSFOG00015020017	parp1	100	80.980	ENSXMAG00000003632	parp1	100	81.275	Xiphophorus_maculatus