EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020020 (Gene tree)
Gene ID: 108932951
Gene Symbol: sall1a (1 of many)
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 11129 bases
Position: chrKV411009.1:2058670-2069798
Accession: 108932951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031222	zf-C2H2	PF00096.26	1.6e-34	1	6
ENSSFOP00015031222	zf-C2H2	PF00096.26	1.6e-34	2	6
ENSSFOP00015031222	zf-C2H2	PF00096.26	1.6e-34	3	6
ENSSFOP00015031222	zf-C2H2	PF00096.26	1.6e-34	4	6
ENSSFOP00015031222	zf-C2H2	PF00096.26	1.6e-34	5	6
ENSSFOP00015031222	zf-C2H2	PF00096.26	1.6e-34	6	6
ENSSFOP00015031222	zf-met	PF12874.7	4e-24	1	4
ENSSFOP00015031222	zf-met	PF12874.7	4e-24	2	4
ENSSFOP00015031222	zf-met	PF12874.7	4e-24	3	4
ENSSFOP00015031222	zf-met	PF12874.7	4e-24	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031573	-	3843	XM_018749676	ENSSFOP00015031222	1280 (aa)	XP_018605192	-

Gene Model

Click here to download ENSSFOG00015020020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020020	sall1a	96	46.364	ENSSFOG00015009159	SALL3	93	61.224
ENSSFOG00015020020	sall1a	77	61.224	ENSSFOG00015012223	sall3a	99	63.636
ENSSFOG00015020020	sall1a	98	70.615	ENSSFOG00015001590	sall1a	99	70.615
ENSSFOG00015020020	sall1a	63	53.061	ENSSFOG00015008994	znf236	63	53.061
ENSSFOG00015020020	sall1a	63	36.634	ENSSFOG00015010829	-	75	46.154
ENSSFOG00015020020	sall1a	95	65.385	ENSSFOG00015021075	sall4	94	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020020	sall1a	99	66.890	ENSG00000103449	SALL1	99	67.664	Homo_sapiens
ENSSFOG00015020020	sall1a	100	73.509	ENSAPOG00000022764	sall1a	100	73.509	Acanthochromis_polyacanthus
ENSSFOG00015020020	sall1a	99	66.291	ENSAMEG00000006817	SALL1	100	66.517	Ailuropoda_melanoleuca
ENSSFOG00015020020	sall1a	100	72.885	ENSACIG00000004231	sall1a	100	72.961	Amphilophus_citrinellus
ENSSFOG00015020020	sall1a	100	73.585	ENSAOCG00000002800	sall1a	100	73.585	Amphiprion_ocellaris
ENSSFOG00015020020	sall1a	100	73.358	ENSAPEG00000010179	sall1a	100	73.358	Amphiprion_percula
ENSSFOG00015020020	sall1a	99	72.755	ENSATEG00000003006	sall1a	99	73.671	Anabas_testudineus
ENSSFOG00015020020	sall1a	100	67.774	ENSAPLG00000003356	SALL1	100	67.722	Anas_platyrhynchos
ENSSFOG00015020020	sall1a	99	66.009	ENSACAG00000014399	SALL1	97	65.706	Anolis_carolinensis
ENSSFOG00015020020	sall1a	99	66.966	ENSANAG00000027238	SALL1	99	67.040	Aotus_nancymaae
ENSSFOG00015020020	sall1a	100	72.810	ENSACLG00000017148	sall1a	100	72.885	Astatotilapia_calliptera
ENSSFOG00015020020	sall1a	100	74.077	ENSAMXG00000018599	sall1a	100	73.775	Astyanax_mexicanus
ENSSFOG00015020020	sall1a	99	52.033	ENSAMXG00000017702	sall1b	99	52.395	Astyanax_mexicanus
ENSSFOG00015020020	sall1a	99	66.866	ENSBTAG00000008544	SALL1	100	66.617	Bos_taurus
ENSSFOG00015020020	sall1a	99	66.916	ENSCJAG00000001740	SALL1	99	67.140	Callithrix_jacchus
ENSSFOG00015020020	sall1a	99	66.294	ENSCAFG00000009755	SALL1	99	66.542	Canis_familiaris
ENSSFOG00015020020	sall1a	99	66.294	ENSCAFG00020002842	SALL1	99	66.542	Canis_lupus_dingo
ENSSFOG00015020020	sall1a	99	66.941	ENSCHIG00000026074	SALL1	100	66.867	Capra_hircus
ENSSFOG00015020020	sall1a	99	67.916	ENSTSYG00000029464	SALL1	99	67.892	Carlito_syrichta
ENSSFOG00015020020	sall1a	97	67.157	ENSCPOG00000006564	SALL1	99	67.285	Cavia_porcellus
ENSSFOG00015020020	sall1a	99	65.719	ENSCCAG00000001639	SALL1	99	65.793	Cebus_capucinus
ENSSFOG00015020020	sall1a	99	67.191	ENSCATG00000004982	SALL1	99	67.491	Cercocebus_atys
ENSSFOG00015020020	sall1a	99	66.992	ENSCLAG00000006380	SALL1	99	67.117	Chinchilla_lanigera
ENSSFOG00015020020	sall1a	99	66.293	ENSCSAG00000005319	SALL1	99	66.642	Chlorocebus_sabaeus
ENSSFOG00015020020	sall1a	62	67.323	ENSCHOG00000000800	-	69	66.929	Choloepus_hoffmanni
ENSSFOG00015020020	sall1a	100	67.321	ENSCPBG00000015924	SALL1	100	67.270	Chrysemys_picta_bellii
ENSSFOG00015020020	sall1a	99	67.166	ENSCANG00000036664	SALL1	99	68.156	Colobus_angolensis_palliatus
ENSSFOG00015020020	sall1a	99	65.919	ENSCGRG00001023314	-	99	66.018	Cricetulus_griseus_chok1gshd
ENSSFOG00015020020	sall1a	98	65.953	ENSCGRG00000009496	Sall1	99	66.003	Cricetulus_griseus_crigri
ENSSFOG00015020020	sall1a	99	71.654	ENSCSEG00000009349	sall1a	99	71.805	Cynoglossus_semilaevis
ENSSFOG00015020020	sall1a	90	70.970	ENSCVAG00000020513	sall1a	99	70.897	Cyprinodon_variegatus
ENSSFOG00015020020	sall1a	99	48.931	ENSDARG00000075891	sall1b	99	48.365	Danio_rerio
ENSSFOG00015020020	sall1a	100	72.105	ENSDARG00000074319	sall1a	100	71.729	Danio_rerio
ENSSFOG00015020020	sall1a	99	67.142	ENSDNOG00000016413	SALL1	99	67.067	Dasypus_novemcinctus
ENSSFOG00015020020	sall1a	97	67.157	ENSETEG00000015150	SALL1	99	67.002	Echinops_telfairi
ENSSFOG00015020020	sall1a	64	43.888	ENSEBUG00000008798	SALL1	70	42.333	Eptatretus_burgeri
ENSSFOG00015020020	sall1a	99	66.967	ENSEASG00005014602	SALL1	99	67.868	Equus_asinus_asinus
ENSSFOG00015020020	sall1a	90	64.930	ENSECAG00000011334	SALL1	99	65.922	Equus_caballus
ENSSFOG00015020020	sall1a	97	67.051	ENSEEUG00000002014	SALL1	99	66.692	Erinaceus_europaeus
ENSSFOG00015020020	sall1a	100	69.116	ENSELUG00000006159	sall1a	100	69.231	Esox_lucius
ENSSFOG00015020020	sall1a	100	53.459	ENSELUG00000017774	-	100	52.897	Esox_lucius
ENSSFOG00015020020	sall1a	99	66.092	ENSFCAG00000024654	SALL1	100	66.442	Felis_catus
ENSSFOG00015020020	sall1a	100	67.674	ENSFALG00000000074	SALL1	100	67.523	Ficedula_albicollis
ENSSFOG00015020020	sall1a	100	72.474	ENSFHEG00000012579	sall1a	100	72.549	Fundulus_heteroclitus
ENSSFOG00015020020	sall1a	75	61.538	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSSFOG00015020020	sall1a	96	41.616	ENSGMOG00000013383	-	98	42.331	Gadus_morhua
ENSSFOG00015020020	sall1a	100	71.611	ENSGMOG00000006103	sall1a	100	71.623	Gadus_morhua
ENSSFOG00015020020	sall1a	100	67.572	ENSGALG00000039238	SALL1	100	67.547	Gallus_gallus
ENSSFOG00015020020	sall1a	100	72.755	ENSGAFG00000009964	sall1a	100	72.830	Gambusia_affinis
ENSSFOG00015020020	sall1a	99	71.677	ENSGACG00000016702	sall1a	99	71.979	Gasterosteus_aculeatus
ENSSFOG00015020020	sall1a	100	67.219	ENSGAGG00000013979	SALL1	100	67.169	Gopherus_agassizii
ENSSFOG00015020020	sall1a	99	66.890	ENSGGOG00000000663	SALL1	99	67.090	Gorilla_gorilla
ENSSFOG00015020020	sall1a	100	72.810	ENSHBUG00000022005	sall1a	100	72.885	Haplochromis_burtoni
ENSSFOG00015020020	sall1a	99	67.293	ENSHGLG00000004288	-	99	67.643	Heterocephalus_glaber_female
ENSSFOG00015020020	sall1a	99	67.293	ENSHGLG00100017496	SALL1	99	67.643	Heterocephalus_glaber_male
ENSSFOG00015020020	sall1a	100	70.232	ENSHCOG00000000974	sall1a	100	70.606	Hippocampus_comes
ENSSFOG00015020020	sall1a	100	72.720	ENSIPUG00000016265	SALL1	100	72.570	Ictalurus_punctatus
ENSSFOG00015020020	sall1a	99	50.302	ENSIPUG00000022928	sall1b	99	49.622	Ictalurus_punctatus
ENSSFOG00015020020	sall1a	99	66.767	ENSSTOG00000020885	SALL1	99	67.118	Ictidomys_tridecemlineatus
ENSSFOG00015020020	sall1a	100	72.775	ENSKMAG00000016681	sall1a	100	72.851	Kryptolebias_marmoratus
ENSSFOG00015020020	sall1a	98	69.878	ENSLBEG00000012207	sall1a	97	70.183	Labrus_bergylta
ENSSFOG00015020020	sall1a	96	38.687	ENSLACG00000014018	-	98	38.628	Latimeria_chalumnae
ENSSFOG00015020020	sall1a	100	67.776	ENSLACG00000003556	SALL1	100	67.549	Latimeria_chalumnae
ENSSFOG00015020020	sall1a	100	75.038	ENSLOCG00000007283	sall1b	100	74.662	Lepisosteus_oculatus
ENSSFOG00015020020	sall1a	98	67.281	ENSLAFG00000015251	SALL1	99	67.460	Loxodonta_africana
ENSSFOG00015020020	sall1a	99	66.841	ENSMFAG00000003298	SALL1	99	67.140	Macaca_fascicularis
ENSSFOG00015020020	sall1a	92	67.557	ENSMMUG00000017200	SALL1	99	67.718	Macaca_mulatta
ENSSFOG00015020020	sall1a	92	67.745	ENSMNEG00000034770	SALL1	99	67.664	Macaca_nemestrina
ENSSFOG00015020020	sall1a	99	67.241	ENSMLEG00000036406	SALL1	99	68.156	Mandrillus_leucophaeus
ENSSFOG00015020020	sall1a	99	73.283	ENSMAMG00000004164	sall1a	99	74.162	Mastacembelus_armatus
ENSSFOG00015020020	sall1a	100	72.734	ENSMZEG00005006479	sall1a	100	72.810	Maylandia_zebra
ENSSFOG00015020020	sall1a	98	67.540	ENSMGAG00000004704	SALL1	100	67.438	Meleagris_gallopavo
ENSSFOG00015020020	sall1a	99	65.940	ENSMAUG00000019093	Sall1	100	66.041	Mesocricetus_auratus
ENSSFOG00015020020	sall1a	99	67.592	ENSMICG00000036486	SALL1	100	67.316	Microcebus_murinus
ENSSFOG00015020020	sall1a	99	72.109	ENSMMOG00000016400	sall1a	99	72.411	Mola_mola
ENSSFOG00015020020	sall1a	99	67.344	ENSMODG00000013114	SALL1	99	67.395	Monodelphis_domestica
ENSSFOG00015020020	sall1a	99	72.981	ENSMALG00000013400	sall1a	99	72.981	Monopterus_albus
ENSSFOG00015020020	sall1a	99	65.379	MGP_CAROLIEiJ_G0031362	Sall1	100	65.405	Mus_caroli
ENSSFOG00015020020	sall1a	99	65.479	ENSMUSG00000031665	Sall1	99	65.553	Mus_musculus
ENSSFOG00015020020	sall1a	99	65.356	MGP_PahariEiJ_G0022961	Sall1	99	65.430	Mus_pahari
ENSSFOG00015020020	sall1a	99	65.405	MGP_SPRETEiJ_G0032480	Sall1	99	65.479	Mus_spretus
ENSSFOG00015020020	sall1a	98	67.127	ENSMPUG00000003265	SALL1	96	67.026	Mustela_putorius_furo
ENSSFOG00015020020	sall1a	97	66.283	ENSMLUG00000015541	SALL1	99	66.590	Myotis_lucifugus
ENSSFOG00015020020	sall1a	100	72.961	ENSNBRG00000009307	sall1a	100	73.036	Neolamprologus_brichardi
ENSSFOG00015020020	sall1a	98	80.447	ENSNLEG00000001008	SALL1	99	80.447	Nomascus_leucogenys
ENSSFOG00015020020	sall1a	99	67.295	ENSMEUG00000012206	SALL1	99	67.195	Notamacropus_eugenii
ENSSFOG00015020020	sall1a	97	70.899	ENSOPRG00000005645	SALL1	71	72.419	Ochotona_princeps
ENSSFOG00015020020	sall1a	99	67.218	ENSODEG00000003685	SALL1	99	66.692	Octodon_degus
ENSSFOG00015020020	sall1a	100	72.961	ENSONIG00000002831	sall1a	100	73.036	Oreochromis_niloticus
ENSSFOG00015020020	sall1a	89	75.107	ENSOANG00000013399	SALL1	99	75.107	Ornithorhynchus_anatinus
ENSSFOG00015020020	sall1a	100	72.521	ENSORLG00000013827	sall1a	99	74.728	Oryzias_latipes
ENSSFOG00015020020	sall1a	100	72.521	ENSORLG00020020570	sall1a	100	72.508	Oryzias_latipes_hni
ENSSFOG00015020020	sall1a	100	72.445	ENSORLG00015018830	sall1a	97	76.227	Oryzias_latipes_hsok
ENSSFOG00015020020	sall1a	100	71.882	ENSOMEG00000016043	sall1a	99	72.973	Oryzias_melastigma
ENSSFOG00015020020	sall1a	99	68.012	ENSOGAG00000027316	SALL1	99	67.636	Otolemur_garnettii
ENSSFOG00015020020	sall1a	99	62.332	ENSOARG00000017583	SALL1	100	62.166	Ovis_aries
ENSSFOG00015020020	sall1a	97	49.614	ENSPPAG00000035136	-	98	49.729	Pan_paniscus
ENSSFOG00015020020	sall1a	98	66.870	ENSPPAG00000035657	SALL1	99	67.023	Pan_paniscus
ENSSFOG00015020020	sall1a	99	66.017	ENSPPRG00000023283	SALL1	100	66.367	Panthera_pardus
ENSSFOG00015020020	sall1a	86	81.714	ENSPTIG00000013539	-	94	73.004	Panthera_tigris_altaica
ENSSFOG00015020020	sall1a	99	66.891	ENSPTRG00000008108	SALL1	99	67.091	Pan_troglodytes
ENSSFOG00015020020	sall1a	96	49.375	ENSPTRG00000045256	-	97	49.764	Pan_troglodytes
ENSSFOG00015020020	sall1a	99	67.316	ENSPANG00000024176	SALL1	99	67.616	Papio_anubis
ENSSFOG00015020020	sall1a	100	70.311	ENSPKIG00000005383	-	100	70.084	Paramormyrops_kingsleyae
ENSSFOG00015020020	sall1a	100	79.682	ENSPKIG00000022251	sall1a	100	79.682	Paramormyrops_kingsleyae
ENSSFOG00015020020	sall1a	100	67.447	ENSPSIG00000008582	SALL1	100	67.372	Pelodiscus_sinensis
ENSSFOG00015020020	sall1a	99	69.708	ENSPMGG00000021788	sall1a	99	69.708	Periophthalmus_magnuspinnatus
ENSSFOG00015020020	sall1a	99	67.219	ENSPCIG00000017840	SALL1	99	67.270	Phascolarctos_cinereus
ENSSFOG00015020020	sall1a	98	72.657	ENSPFOG00000015799	sall1a	96	72.734	Poecilia_formosa
ENSSFOG00015020020	sall1a	100	72.741	ENSPLAG00000022539	sall1a	100	72.816	Poecilia_latipinna
ENSSFOG00015020020	sall1a	100	72.967	ENSPMEG00000020894	sall1a	100	73.042	Poecilia_mexicana
ENSSFOG00015020020	sall1a	100	72.816	ENSPREG00000006802	sall1a	100	72.892	Poecilia_reticulata
ENSSFOG00015020020	sall1a	90	65.997	ENSPPYG00000007345	SALL1	96	66.080	Pongo_abelii
ENSSFOG00015020020	sall1a	86	69.171	ENSPCAG00000008162	SALL1	92	69.073	Procavia_capensis
ENSSFOG00015020020	sall1a	99	67.592	ENSPCOG00000028192	SALL1	99	67.442	Propithecus_coquereli
ENSSFOG00015020020	sall1a	72	70.766	ENSPVAG00000015374	SALL1	100	70.602	Pteropus_vampyrus
ENSSFOG00015020020	sall1a	100	72.885	ENSPNYG00000010865	sall1a	100	72.961	Pundamilia_nyererei
ENSSFOG00015020020	sall1a	99	53.840	ENSPNAG00000007442	sall1b	99	52.941	Pygocentrus_nattereri
ENSSFOG00015020020	sall1a	99	65.306	ENSPNAG00000028248	-	99	65.306	Pygocentrus_nattereri
ENSSFOG00015020020	sall1a	100	71.741	ENSPNAG00000023644	sall1a	100	71.439	Pygocentrus_nattereri
ENSSFOG00015020020	sall1a	99	65.866	ENSRNOG00000013907	Sall1	99	65.399	Rattus_norvegicus
ENSSFOG00015020020	sall1a	92	67.802	ENSRBIG00000015707	SALL1	99	67.964	Rhinopithecus_bieti
ENSSFOG00015020020	sall1a	98	66.998	ENSRROG00000035777	SALL1	99	67.909	Rhinopithecus_roxellana
ENSSFOG00015020020	sall1a	99	66.990	ENSSBOG00000032186	SALL1	99	67.214	Saimiri_boliviensis_boliviensis
ENSSFOG00015020020	sall1a	99	67.195	ENSSHAG00000009477	SALL1	99	67.270	Sarcophilus_harrisii
ENSSFOG00015020020	sall1a	99	73.222	ENSSMAG00000009160	sall1a	99	73.449	Scophthalmus_maximus
ENSSFOG00015020020	sall1a	78	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSSFOG00015020020	sall1a	99	73.660	ENSSDUG00000006507	sall1a	99	74.734	Seriola_dumerili
ENSSFOG00015020020	sall1a	99	73.736	ENSSLDG00000017721	sall1a	99	73.962	Seriola_lalandi_dorsalis
ENSSFOG00015020020	sall1a	58	88.406	ENSSLDG00000014465	-	83	89.062	Seriola_lalandi_dorsalis
ENSSFOG00015020020	sall1a	98	65.961	ENSSARG00000000661	SALL1	99	67.410	Sorex_araneus
ENSSFOG00015020020	sall1a	100	67.245	ENSSPUG00000000156	SALL1	100	67.195	Sphenodon_punctatus
ENSSFOG00015020020	sall1a	100	73.740	ENSSPAG00000021615	sall1a	100	73.740	Stegastes_partitus
ENSSFOG00015020020	sall1a	99	65.997	ENSSSCG00000002836	SALL1	100	65.973	Sus_scrofa
ENSSFOG00015020020	sall1a	100	67.900	ENSTGUG00000007514	SALL1	100	67.722	Taeniopygia_guttata
ENSSFOG00015020020	sall1a	91	70.025	ENSTRUG00000008950	sall1a	100	70.273	Takifugu_rubripes
ENSSFOG00015020020	sall1a	92	70.288	ENSTNIG00000004257	sall1a	100	70.370	Tetraodon_nigroviridis
ENSSFOG00015020020	sall1a	71	74.483	ENSTBEG00000002119	-	53	73.973	Tupaia_belangeri
ENSSFOG00015020020	sall1a	90	65.690	ENSUAMG00000023379	-	92	65.690	Ursus_americanus
ENSSFOG00015020020	sall1a	90	65.083	ENSVVUG00000019383	-	99	65.109	Vulpes_vulpes
ENSSFOG00015020020	sall1a	100	63.201	ENSXETG00000018417	sall1	100	63.127	Xenopus_tropicalis
ENSSFOG00015020020	sall1a	96	36.010	ENSXETG00000017176	sall2	98	35.540	Xenopus_tropicalis
ENSSFOG00015020020	sall1a	100	72.755	ENSXMAG00000016273	sall1a	100	72.830	Xiphophorus_maculatus