EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020051 (Gene tree)
Gene ID: 108920319
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: GTP-binding protein SAR1b
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 8551 bases
Position: chrKV411287.1:1251319-1259869
Accession: 108920319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031275	MMR_HSR1	PF01926.23	2.4e-05	1	1
ENSSFOP00015031284	MMR_HSR1	PF01926.23	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015031627	-	2291	XM_018728972	ENSSFOP00015031275	198 (aa)	XP_018584488	A0A1W4Y8A0
ENSSFOT00015031636	-	438	-	ENSSFOP00015031284	145 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015020051's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020051	sar1b	86	30.508	ENSSFOG00015023057	arl13b	66	30.508
ENSSFOG00015020051	sar1b	77	33.929	ENSSFOG00015004822	arf3a	61	33.929
ENSSFOG00015020051	sar1b	76	30.464	ENSSFOG00015020131	arl8bb	81	30.464
ENSSFOG00015020051	sar1b	100	95.455	ENSSFOG00015018128	-	100	95.455
ENSSFOG00015020051	sar1b	87	31.395	ENSSFOG00015020707	ARF5	89	31.395
ENSSFOG00015020051	sar1b	96	31.414	ENSSFOG00015022345	-	96	31.414
ENSSFOG00015020051	sar1b	90	32.308	ENSSFOG00015002122	arl5b	67	32.308
ENSSFOG00015020051	sar1b	77	33.929	ENSSFOG00015015116	arf3	61	33.929
ENSSFOG00015020051	sar1b	94	31.579	ENSSFOG00015023135	arl6	96	31.579
ENSSFOG00015020051	sar1b	73	35.514	ENSSFOG00015021396	-	59	35.514
ENSSFOG00015020051	sar1b	73	35.514	ENSSFOG00015009538	arf1	59	35.514
ENSSFOG00015020051	sar1b	64	38.298	ENSSFOG00015001190	arl11	74	36.154
ENSSFOG00015020051	sar1b	81	35.294	ENSSFOG00015001665	arl1	65	35.294
ENSSFOG00015020051	sar1b	65	32.031	ENSSFOG00015015338	-	73	32.031
ENSSFOG00015020051	sar1b	72	38.532	ENSSFOG00015007064	arl4cb	72	33.108
ENSSFOG00015020051	sar1b	64	30.097	ENSSFOG00015020500	arfrp1	50	30.097
ENSSFOG00015020051	sar1b	61	31.461	ENSSFOG00015005606	arl5a	50	31.461
ENSSFOG00015020051	sar1b	91	31.351	ENSSFOG00015004083	arl6	90	31.915
ENSSFOG00015020051	sar1b	72	34.615	ENSSFOG00015014993	-	56	34.615
ENSSFOG00015020051	sar1b	74	30.612	ENSSFOG00015019411	arl8ba	68	30.612
ENSSFOG00015020051	sar1b	70	32.353	ENSSFOG00015008219	arl2	73	33.913
ENSSFOG00015020051	sar1b	72	30.769	ENSSFOG00015023529	arl5c	55	32.979
ENSSFOG00015020051	sar1b	73	35.514	ENSSFOG00015004387	-	59	35.514
ENSSFOG00015020051	sar1b	61	37.634	ENSSFOG00015015390	ARL4A	58	35.088
ENSSFOG00015020051	sar1b	100	90.909	ENSSFOG00015014010	sar1a	100	90.909
ENSSFOG00015020051	sar1b	92	30.645	ENSSFOG00015007701	-	94	30.645
ENSSFOG00015020051	sar1b	61	39.785	ENSSFOG00015020603	arl4aa	66	34.351
ENSSFOG00015020051	sar1b	72	38.532	ENSSFOG00015018615	ARL4C	73	33.108
ENSSFOG00015020051	sar1b	66	30.208	ENSSFOG00015021226	arl5a	50	31.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020051	sar1b	100	87.374	ENSAPOG00000017891	-	100	87.374	Acanthochromis_polyacanthus
ENSSFOG00015020051	sar1b	100	93.434	ENSAPOG00000007186	sar1b	100	93.434	Acanthochromis_polyacanthus
ENSSFOG00015020051	sar1b	100	92.929	ENSACIG00000013634	sar1b	100	92.929	Amphilophus_citrinellus
ENSSFOG00015020051	sar1b	100	85.859	ENSACIG00000024513	-	100	85.859	Amphilophus_citrinellus
ENSSFOG00015020051	sar1b	100	92.929	ENSAOCG00000005888	sar1b	100	92.929	Amphiprion_ocellaris
ENSSFOG00015020051	sar1b	100	87.374	ENSAOCG00000002627	-	100	87.374	Amphiprion_ocellaris
ENSSFOG00015020051	sar1b	100	92.929	ENSAPEG00000022771	sar1b	100	92.929	Amphiprion_percula
ENSSFOG00015020051	sar1b	100	87.374	ENSAPEG00000019680	-	100	87.374	Amphiprion_percula
ENSSFOG00015020051	sar1b	100	92.424	ENSATEG00000012904	sar1b	100	92.424	Anabas_testudineus
ENSSFOG00015020051	sar1b	100	84.848	ENSATEG00000023368	-	100	84.848	Anabas_testudineus
ENSSFOG00015020051	sar1b	100	93.434	ENSACAG00000001470	-	100	93.434	Anolis_carolinensis
ENSSFOG00015020051	sar1b	100	94.444	ENSACLG00000014649	sar1b	100	94.444	Astatotilapia_calliptera
ENSSFOG00015020051	sar1b	100	86.869	ENSACLG00000005011	-	100	86.869	Astatotilapia_calliptera
ENSSFOG00015020051	sar1b	81	97.458	ENSAMXG00000018108	sar1b	85	97.458	Astyanax_mexicanus
ENSSFOG00015020051	sar1b	100	88.384	ENSAMXG00000034192	-	91	88.384	Astyanax_mexicanus
ENSSFOG00015020051	sar1b	100	86.364	ENSCSEG00000016976	-	100	86.364	Cynoglossus_semilaevis
ENSSFOG00015020051	sar1b	100	86.364	ENSCSEG00000015238	sar1b	97	86.364	Cynoglossus_semilaevis
ENSSFOG00015020051	sar1b	100	96.465	ENSCVAG00000022959	sar1b	100	96.465	Cyprinodon_variegatus
ENSSFOG00015020051	sar1b	100	96.465	ENSDARG00000103403	sar1b	100	96.465	Danio_rerio
ENSSFOG00015020051	sar1b	99	71.429	FBgn0038947	Sar1	99	71.429	Drosophila_melanogaster
ENSSFOG00015020051	sar1b	97	89.583	ENSEBUG00000011723	sar1b	97	89.583	Eptatretus_burgeri
ENSSFOG00015020051	sar1b	100	97.475	ENSELUG00000020912	sar1b	100	97.475	Esox_lucius
ENSSFOG00015020051	sar1b	100	94.949	ENSFHEG00000019865	sar1b	100	94.949	Fundulus_heteroclitus
ENSSFOG00015020051	sar1b	100	96.970	ENSGMOG00000008023	sar1b	100	96.970	Gadus_morhua
ENSSFOG00015020051	sar1b	100	93.939	ENSGAFG00000007081	sar1b	100	93.939	Gambusia_affinis
ENSSFOG00015020051	sar1b	100	91.919	ENSGACG00000001474	sar1b	100	91.919	Gasterosteus_aculeatus
ENSSFOG00015020051	sar1b	100	86.869	ENSHBUG00000018397	-	100	86.869	Haplochromis_burtoni
ENSSFOG00015020051	sar1b	100	94.444	ENSHBUG00000000915	sar1b	100	94.444	Haplochromis_burtoni
ENSSFOG00015020051	sar1b	100	94.444	ENSHCOG00000010953	sar1b	100	94.444	Hippocampus_comes
ENSSFOG00015020051	sar1b	100	89.899	ENSIPUG00000010046	sar1b	100	89.899	Ictalurus_punctatus
ENSSFOG00015020051	sar1b	100	95.960	ENSIPUG00000020925	sar1b	100	95.960	Ictalurus_punctatus
ENSSFOG00015020051	sar1b	100	86.869	ENSKMAG00000014875	-	100	86.869	Kryptolebias_marmoratus
ENSSFOG00015020051	sar1b	100	93.434	ENSKMAG00000019693	sar1b	100	93.434	Kryptolebias_marmoratus
ENSSFOG00015020051	sar1b	100	87.879	ENSLBEG00000016945	-	100	87.879	Labrus_bergylta
ENSSFOG00015020051	sar1b	100	91.414	ENSLBEG00000027550	sar1b	100	91.414	Labrus_bergylta
ENSSFOG00015020051	sar1b	100	87.879	ENSLACG00000010795	sar1b	100	87.879	Latimeria_chalumnae
ENSSFOG00015020051	sar1b	100	75.879	ENSLACG00000017029	-	100	75.879	Latimeria_chalumnae
ENSSFOG00015020051	sar1b	100	93.434	ENSLOCG00000005214	-	100	93.434	Lepisosteus_oculatus
ENSSFOG00015020051	sar1b	100	98.485	ENSLOCG00000010197	sar1b	100	98.485	Lepisosteus_oculatus
ENSSFOG00015020051	sar1b	100	93.434	ENSMAMG00000021732	sar1b	100	93.434	Mastacembelus_armatus
ENSSFOG00015020051	sar1b	100	86.869	ENSMZEG00005001012	-	100	86.869	Maylandia_zebra
ENSSFOG00015020051	sar1b	100	94.444	ENSMZEG00005008942	sar1b	100	94.444	Maylandia_zebra
ENSSFOG00015020051	sar1b	90	93.855	ENSMGAG00000005387	-	91	93.855	Meleagris_gallopavo
ENSSFOG00015020051	sar1b	100	85.859	ENSMMOG00000013803	-	100	85.859	Mola_mola
ENSSFOG00015020051	sar1b	100	94.949	ENSMALG00000016635	sar1b	97	93.407	Monopterus_albus
ENSSFOG00015020051	sar1b	100	86.869	ENSNBRG00000014004	-	100	86.869	Neolamprologus_brichardi
ENSSFOG00015020051	sar1b	100	93.939	ENSNBRG00000008013	sar1b	100	93.939	Neolamprologus_brichardi
ENSSFOG00015020051	sar1b	100	93.434	ENSONIG00000017278	sar1b	100	93.434	Oreochromis_niloticus
ENSSFOG00015020051	sar1b	100	92.929	ENSORLG00000000932	sar1b	100	92.929	Oryzias_latipes
ENSSFOG00015020051	sar1b	100	92.929	ENSORLG00020021985	sar1b	100	92.929	Oryzias_latipes_hni
ENSSFOG00015020051	sar1b	100	92.929	ENSORLG00015007044	sar1b	100	92.929	Oryzias_latipes_hsok
ENSSFOG00015020051	sar1b	100	92.929	ENSOMEG00000001052	sar1b	100	92.929	Oryzias_melastigma
ENSSFOG00015020051	sar1b	100	93.939	ENSPKIG00000010688	sar1b	100	93.939	Paramormyrops_kingsleyae
ENSSFOG00015020051	sar1b	100	94.949	ENSPKIG00000017353	-	100	94.949	Paramormyrops_kingsleyae
ENSSFOG00015020051	sar1b	83	91.736	ENSPMGG00000001234	sar1b	95	91.736	Periophthalmus_magnuspinnatus
ENSSFOG00015020051	sar1b	100	86.070	ENSPMAG00000003593	sar1b	100	86.070	Petromyzon_marinus
ENSSFOG00015020051	sar1b	100	93.434	ENSPFOG00000005666	sar1b	100	93.434	Poecilia_formosa
ENSSFOG00015020051	sar1b	100	93.434	ENSPLAG00000012223	sar1b	100	93.434	Poecilia_latipinna
ENSSFOG00015020051	sar1b	98	78.169	ENSPLAG00000001016	-	90	79.577	Poecilia_latipinna
ENSSFOG00015020051	sar1b	100	93.434	ENSPMEG00000016831	sar1b	100	93.434	Poecilia_mexicana
ENSSFOG00015020051	sar1b	100	93.434	ENSPREG00000005312	sar1b	90	93.434	Poecilia_reticulata
ENSSFOG00015020051	sar1b	81	90.598	ENSPREG00000002020	-	87	90.598	Poecilia_reticulata
ENSSFOG00015020051	sar1b	100	94.444	ENSPNYG00000012440	sar1b	100	94.444	Pundamilia_nyererei
ENSSFOG00015020051	sar1b	100	86.869	ENSPNYG00000021357	-	100	86.869	Pundamilia_nyererei
ENSSFOG00015020051	sar1b	100	88.889	ENSPNAG00000001123	-	100	88.889	Pygocentrus_nattereri
ENSSFOG00015020051	sar1b	100	97.475	ENSPNAG00000014683	sar1b	100	97.475	Pygocentrus_nattereri
ENSSFOG00015020051	sar1b	100	86.869	ENSSMAG00000002165	-	100	86.869	Scophthalmus_maximus
ENSSFOG00015020051	sar1b	100	90.909	ENSSMAG00000007106	sar1b	80	90.909	Scophthalmus_maximus
ENSSFOG00015020051	sar1b	100	93.434	ENSSDUG00000020926	sar1b	100	93.434	Seriola_dumerili
ENSSFOG00015020051	sar1b	100	86.869	ENSSDUG00000019629	-	100	86.869	Seriola_dumerili
ENSSFOG00015020051	sar1b	100	93.434	ENSSLDG00000017052	sar1b	100	93.434	Seriola_lalandi_dorsalis
ENSSFOG00015020051	sar1b	100	86.869	ENSSLDG00000024197	-	100	86.869	Seriola_lalandi_dorsalis
ENSSFOG00015020051	sar1b	100	92.929	ENSSPUG00000010247	-	100	92.929	Sphenodon_punctatus
ENSSFOG00015020051	sar1b	100	86.869	ENSSPAG00000015626	-	100	86.869	Stegastes_partitus
ENSSFOG00015020051	sar1b	100	93.939	ENSSPAG00000017634	sar1b	100	93.939	Stegastes_partitus
ENSSFOG00015020051	sar1b	100	89.394	ENSTRUG00000023908	sar1b	100	89.394	Takifugu_rubripes
ENSSFOG00015020051	sar1b	100	89.899	ENSTNIG00000016097	sar1b	100	89.899	Tetraodon_nigroviridis
ENSSFOG00015020051	sar1b	90	94.382	ENSXCOG00000004160	sar1b	87	94.382	Xiphophorus_couchianus
ENSSFOG00015020051	sar1b	84	86.885	ENSXCOG00000006154	-	81	86.885	Xiphophorus_couchianus
ENSSFOG00015020051	sar1b	100	93.939	ENSXMAG00000008294	sar1b	100	93.939	Xiphophorus_maculatus