EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020209 (Gene tree)
Gene ID: 108932967
Gene Symbol: chd9 (1 of many)
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain-helicase-DNA-binding protein 9-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 66176 bases
Position: chrKV411009.1:2606926-2673101
Accession: 108932967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031762	ResIII	PF04851.15	5.1e-07	1	1
ENSSFOP00015031814	ResIII	PF04851.15	5.2e-07	1	1
ENSSFOP00015031895	ResIII	PF04851.15	6.5e-07	1	1
ENSSFOP00015031716	ResIII	PF04851.15	7.1e-07	1	1
ENSSFOP00015031762	BRK	PF07533.16	9.9e-33	1	2
ENSSFOP00015031762	BRK	PF07533.16	9.9e-33	2	2
ENSSFOP00015031814	BRK	PF07533.16	1e-32	1	2
ENSSFOP00015031814	BRK	PF07533.16	1e-32	2	2
ENSSFOP00015031895	BRK	PF07533.16	1.3e-32	1	2
ENSSFOP00015031895	BRK	PF07533.16	1.3e-32	2	2
ENSSFOP00015031716	BRK	PF07533.16	1.6e-32	1	2
ENSSFOP00015031716	BRK	PF07533.16	1.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032171	-	9335	XM_018749704	ENSSFOP00015031814	2417 (aa)	XP_018605220	-
ENSSFOT00015032071	-	10931	XM_018749698	ENSSFOP00015031716	2887 (aa)	XP_018605214	-
ENSSFOT00015032118	-	9267	XM_018749705	ENSSFOP00015031762	2392 (aa)	XP_018605221	-
ENSSFOT00015032251	-	8382	-	ENSSFOP00015031895	2793 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015020209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020209	chd9	99	75.882	ENSSFOG00015001327	chd9	97	75.625
ENSSFOG00015020209	chd9	77	65.376	ENSSFOG00015012920	chd6	72	65.305
ENSSFOG00015020209	chd9	67	61.426	ENSSFOG00015011577	chd8	70	59.912
ENSSFOG00015020209	chd9	79	70.134	ENSSFOG00015015077	chd7	70	68.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020209	chd9	99	70.226	ENSG00000177200	CHD9	96	71.815	Homo_sapiens
ENSSFOG00015020209	chd9	99	77.959	ENSAPOG00000023034	chd9	96	79.158	Acanthochromis_polyacanthus
ENSSFOG00015020209	chd9	99	70.755	ENSAMEG00000016232	CHD9	97	64.007	Ailuropoda_melanoleuca
ENSSFOG00015020209	chd9	98	73.810	ENSACIG00000004097	chd9	96	67.359	Amphilophus_citrinellus
ENSSFOG00015020209	chd9	99	77.954	ENSAOCG00000005487	chd9	96	79.546	Amphiprion_ocellaris
ENSSFOG00015020209	chd9	99	77.732	ENSAPEG00000009859	chd9	96	79.158	Amphiprion_percula
ENSSFOG00015020209	chd9	99	77.477	ENSATEG00000002748	chd9	97	70.749	Anabas_testudineus
ENSSFOG00015020209	chd9	99	70.336	ENSAPLG00000002826	CHD9	74	65.460	Anas_platyrhynchos
ENSSFOG00015020209	chd9	69	76.554	ENSACAG00000016150	CHD9	98	62.555	Anolis_carolinensis
ENSSFOG00015020209	chd9	68	76.727	ENSANAG00000015630	CHD9	93	72.143	Aotus_nancymaae
ENSSFOG00015020209	chd9	98	75.898	ENSACLG00000016899	chd9	97	69.128	Astatotilapia_calliptera
ENSSFOG00015020209	chd9	99	76.311	ENSAMXG00000005652	chd9	97	77.551	Astyanax_mexicanus
ENSSFOG00015020209	chd9	99	70.418	ENSBTAG00000002287	CHD9	97	63.198	Bos_taurus
ENSSFOG00015020209	chd9	68	76.788	ENSCJAG00000001573	CHD9	93	72.500	Callithrix_jacchus
ENSSFOG00015020209	chd9	99	70.139	ENSCAFG00000009699	CHD9	97	63.602	Canis_familiaris
ENSSFOG00015020209	chd9	99	70.139	ENSCAFG00020002879	CHD9	92	72.500	Canis_lupus_dingo
ENSSFOG00015020209	chd9	99	67.154	ENSCHIG00000021000	CHD9	74	64.187	Capra_hircus
ENSSFOG00015020209	chd9	99	69.901	ENSTSYG00000007693	CHD9	92	71.786	Carlito_syrichta
ENSSFOG00015020209	chd9	78	60.354	ENSCAPG00000011604	CHD9	80	56.591	Cavia_aperea
ENSSFOG00015020209	chd9	99	60.204	ENSCPOG00000036544	CHD9	97	60.837	Cavia_porcellus
ENSSFOG00015020209	chd9	68	76.606	ENSCCAG00000036178	CHD9	93	71.786	Cebus_capucinus
ENSSFOG00015020209	chd9	99	70.248	ENSCATG00000036753	CHD9	93	72.143	Cercocebus_atys
ENSSFOG00015020209	chd9	99	62.720	ENSCLAG00000007137	CHD9	99	80.578	Chinchilla_lanigera
ENSSFOG00015020209	chd9	99	69.787	ENSCSAG00000005311	CHD9	98	62.907	Chlorocebus_sabaeus
ENSSFOG00015020209	chd9	69	91.667	ENSCHOG00000003935	CHD9	72	91.667	Choloepus_hoffmanni
ENSSFOG00015020209	chd9	90	84.389	ENSCPBG00000012459	CHD9	96	82.362	Chrysemys_picta_bellii
ENSSFOG00015020209	chd9	99	69.787	ENSCANG00000030349	CHD9	93	72.143	Colobus_angolensis_palliatus
ENSSFOG00015020209	chd9	99	69.803	ENSCGRG00001016150	Chd9	97	63.611	Cricetulus_griseus_chok1gshd
ENSSFOG00015020209	chd9	99	69.803	ENSCGRG00000012850	Chd9	99	80.231	Cricetulus_griseus_crigri
ENSSFOG00015020209	chd9	99	74.641	ENSCSEG00000009209	chd9	96	75.444	Cynoglossus_semilaevis
ENSSFOG00015020209	chd9	96	78.422	ENSCVAG00000016195	chd9	97	68.519	Cyprinodon_variegatus
ENSSFOG00015020209	chd9	99	76.533	ENSDARG00000074498	chd9	97	77.449	Danio_rerio
ENSSFOG00015020209	chd9	96	70.380	ENSDNOG00000006045	CHD9	97	72.275	Dasypus_novemcinctus
ENSSFOG00015020209	chd9	52	79.327	ENSDORG00000008523	-	96	72.024	Dipodomys_ordii
ENSSFOG00015020209	chd9	89	94.444	ENSETEG00000009565	CHD9	91	81.818	Echinops_telfairi
ENSSFOG00015020209	chd9	99	70.164	ENSEASG00005014832	CHD9	96	81.886	Equus_asinus_asinus
ENSSFOG00015020209	chd9	99	62.644	ENSECAG00000011505	CHD9	97	63.014	Equus_caballus
ENSSFOG00015020209	chd9	58	89.286	ENSEEUG00000014515	CHD9	87	84.530	Erinaceus_europaeus
ENSSFOG00015020209	chd9	99	76.364	ENSELUG00000006031	chd9	97	77.239	Esox_lucius
ENSSFOG00015020209	chd9	69	76.562	ENSFCAG00000022534	CHD9	92	72.857	Felis_catus
ENSSFOG00015020209	chd9	99	70.196	ENSFALG00000013276	CHD9	97	71.621	Ficedula_albicollis
ENSSFOG00015020209	chd9	68	76.895	ENSFDAG00000021037	CHD9	98	62.424	Fukomys_damarensis
ENSSFOG00015020209	chd9	97	78.392	ENSFHEG00000006068	chd9	95	78.559	Fundulus_heteroclitus
ENSSFOG00015020209	chd9	80	83.333	ENSGMOG00000006040	chd9	83	83.322	Gadus_morhua
ENSSFOG00015020209	chd9	94	72.579	ENSGALG00000039178	CHD9	99	64.444	Gallus_gallus
ENSSFOG00015020209	chd9	97	78.019	ENSGAFG00000010014	chd9	95	78.425	Gambusia_affinis
ENSSFOG00015020209	chd9	97	75.396	ENSGACG00000016694	chd9	95	83.079	Gasterosteus_aculeatus
ENSSFOG00015020209	chd9	99	70.033	ENSGGOG00000014816	CHD9	93	72.500	Gorilla_gorilla
ENSSFOG00015020209	chd9	99	75.575	ENSHBUG00000023322	chd9	96	77.433	Haplochromis_burtoni
ENSSFOG00015020209	chd9	68	77.049	ENSHGLG00000014938	CHD9	99	80.694	Heterocephalus_glaber_female
ENSSFOG00015020209	chd9	97	74.876	ENSHCOG00000000937	chd9	97	75.092	Hippocampus_comes
ENSSFOG00015020209	chd9	99	76.961	ENSIPUG00000016448	chd9	97	77.212	Ictalurus_punctatus
ENSSFOG00015020209	chd9	68	77.030	ENSSTOG00000022273	CHD9	99	80.925	Ictidomys_tridecemlineatus
ENSSFOG00015020209	chd9	82	70.982	ENSJJAG00000015741	-	96	72.361	Jaculus_jaculus
ENSSFOG00015020209	chd9	97	78.378	ENSKMAG00000016784	chd9	96	78.378	Kryptolebias_marmoratus
ENSSFOG00015020209	chd9	97	77.331	ENSLBEG00000012077	chd9	96	77.515	Labrus_bergylta
ENSSFOG00015020209	chd9	98	66.529	ENSLACG00000005557	CHD9	74	60.526	Latimeria_chalumnae
ENSSFOG00015020209	chd9	99	79.746	ENSLOCG00000007225	chd9	99	79.573	Lepisosteus_oculatus
ENSSFOG00015020209	chd9	99	69.622	ENSLAFG00000015374	CHD9	97	62.910	Loxodonta_africana
ENSSFOG00015020209	chd9	99	69.787	ENSMFAG00000041354	CHD9	95	71.713	Macaca_fascicularis
ENSSFOG00015020209	chd9	99	69.787	ENSMMUG00000016310	CHD9	93	72.143	Macaca_mulatta
ENSSFOG00015020209	chd9	99	70.033	ENSMNEG00000031494	CHD9	100	63.786	Macaca_nemestrina
ENSSFOG00015020209	chd9	99	69.745	ENSMLEG00000043219	CHD9	93	72.143	Mandrillus_leucophaeus
ENSSFOG00015020209	chd9	97	78.340	ENSMAMG00000003909	chd9	97	69.856	Mastacembelus_armatus
ENSSFOG00015020209	chd9	99	76.710	ENSMZEG00005006581	chd9	96	78.044	Maylandia_zebra
ENSSFOG00015020209	chd9	99	66.082	ENSMGAG00000004642	CHD9	72	64.033	Meleagris_gallopavo
ENSSFOG00015020209	chd9	99	70.447	ENSMICG00000016679	CHD9	92	72.857	Microcebus_murinus
ENSSFOG00015020209	chd9	98	75.227	ENSMMOG00000016406	chd9	97	68.732	Mola_mola
ENSSFOG00015020209	chd9	88	65.168	ENSMODG00000013142	-	96	79.655	Monodelphis_domestica
ENSSFOG00015020209	chd9	96	77.419	ENSMALG00000013306	chd9	97	69.797	Monopterus_albus
ENSSFOG00015020209	chd9	68	76.360	MGP_CAROLIEiJ_G0031364	Chd9	98	61.851	Mus_caroli
ENSSFOG00015020209	chd9	99	62.111	ENSMUSG00000056608	Chd9	99	79.769	Mus_musculus
ENSSFOG00015020209	chd9	96	64.098	MGP_PahariEiJ_G0022964	Chd9	98	60.932	Mus_pahari
ENSSFOG00015020209	chd9	68	76.360	MGP_SPRETEiJ_G0032483	Chd9	98	62.548	Mus_spretus
ENSSFOG00015020209	chd9	99	70.021	ENSMPUG00000003285	CHD9	97	63.627	Mustela_putorius_furo
ENSSFOG00015020209	chd9	99	62.301	ENSMLUG00000004456	CHD9	81	70.774	Myotis_lucifugus
ENSSFOG00015020209	chd9	99	77.188	ENSNBRG00000009423	chd9	96	78.512	Neolamprologus_brichardi
ENSSFOG00015020209	chd9	87	72.727	ENSNLEG00000001026	CHD9	100	63.150	Nomascus_leucogenys
ENSSFOG00015020209	chd9	74	96.970	ENSMEUG00000008222	-	83	94.839	Notamacropus_eugenii
ENSSFOG00015020209	chd9	79	96.970	ENSOPRG00000011168	CHD9	81	88.636	Ochotona_princeps
ENSSFOG00015020209	chd9	68	76.816	ENSODEG00000004466	CHD9	97	62.526	Octodon_degus
ENSSFOG00015020209	chd9	98	76.850	ENSONIG00000002816	chd9	97	77.950	Oreochromis_niloticus
ENSSFOG00015020209	chd9	99	70.682	ENSOANG00000013401	CHD9	97	64.438	Ornithorhynchus_anatinus
ENSSFOG00015020209	chd9	84	70.206	ENSOCUG00000001016	CHD9	96	71.639	Oryctolagus_cuniculus
ENSSFOG00015020209	chd9	97	76.933	ENSORLG00000013810	chd9	96	76.058	Oryzias_latipes
ENSSFOG00015020209	chd9	92	77.714	ENSORLG00020020665	chd9	96	67.662	Oryzias_latipes_hni
ENSSFOG00015020209	chd9	97	76.809	ENSORLG00015019126	chd9	95	77.318	Oryzias_latipes_hsok
ENSSFOG00015020209	chd9	60	83.358	ENSOMEG00000015978	chd9	99	68.588	Oryzias_melastigma
ENSSFOG00015020209	chd9	68	76.998	ENSOGAG00000002110	CHD9	90	69.598	Otolemur_garnettii
ENSSFOG00015020209	chd9	99	70.070	ENSOARG00000017664	CHD9	97	63.345	Ovis_aries
ENSSFOG00015020209	chd9	99	69.221	ENSPPAG00000039388	-	96	71.072	Pan_paniscus
ENSSFOG00015020209	chd9	69	76.562	ENSPPRG00000004801	CHD9	92	72.857	Panthera_pardus
ENSSFOG00015020209	chd9	69	74.836	ENSPTIG00000021854	CHD9	97	62.820	Panthera_tigris_altaica
ENSSFOG00015020209	chd9	99	69.979	ENSPTRG00000008113	CHD9	93	72.500	Pan_troglodytes
ENSSFOG00015020209	chd9	99	69.745	ENSPANG00000019307	CHD9	96	71.320	Papio_anubis
ENSSFOG00015020209	chd9	94	75.767	ENSPKIG00000025401	-	74	68.913	Paramormyrops_kingsleyae
ENSSFOG00015020209	chd9	99	83.416	ENSPKIG00000021876	chd9	99	84.361	Paramormyrops_kingsleyae
ENSSFOG00015020209	chd9	63	75.696	ENSPSIG00000008099	CHD9	99	64.869	Pelodiscus_sinensis
ENSSFOG00015020209	chd9	81	75.887	ENSPCIG00000017215	CHD9	99	71.910	Phascolarctos_cinereus
ENSSFOG00015020209	chd9	97	77.963	ENSPFOG00000015839	chd9	96	69.231	Poecilia_formosa
ENSSFOG00015020209	chd9	97	78.047	ENSPLAG00000011118	chd9	95	77.889	Poecilia_latipinna
ENSSFOG00015020209	chd9	97	76.314	ENSPMEG00000015106	chd9	96	67.641	Poecilia_mexicana
ENSSFOG00015020209	chd9	97	78.145	ENSPREG00000006473	chd9	95	78.458	Poecilia_reticulata
ENSSFOG00015020209	chd9	99	70.053	ENSPPYG00000007348	CHD9	98	62.334	Pongo_abelii
ENSSFOG00015020209	chd9	72	81.118	ENSPCAG00000007564	CHD9	86	81.118	Procavia_capensis
ENSSFOG00015020209	chd9	99	68.668	ENSPCOG00000028433	CHD9	92	71.786	Propithecus_coquereli
ENSSFOG00015020209	chd9	95	74.123	ENSPVAG00000015617	CHD9	95	59.758	Pteropus_vampyrus
ENSSFOG00015020209	chd9	99	76.589	ENSPNYG00000010947	chd9	96	78.085	Pundamilia_nyererei
ENSSFOG00015020209	chd9	99	77.597	ENSPNAG00000024141	chd9	97	78.340	Pygocentrus_nattereri
ENSSFOG00015020209	chd9	68	73.503	ENSRNOG00000049302	Chd9	100	63.965	Rattus_norvegicus
ENSSFOG00015020209	chd9	99	69.704	ENSRBIG00000035553	CHD9	96	71.277	Rhinopithecus_bieti
ENSSFOG00015020209	chd9	98	70.401	ENSRROG00000033278	CHD9	97	71.713	Rhinopithecus_roxellana
ENSSFOG00015020209	chd9	68	76.788	ENSSBOG00000030240	CHD9	93	72.500	Saimiri_boliviensis_boliviensis
ENSSFOG00015020209	chd9	99	70.429	ENSSHAG00000002719	CHD9	97	63.021	Sarcophilus_harrisii
ENSSFOG00015020209	chd9	97	77.792	ENSSMAG00000008953	chd9	96	78.270	Scophthalmus_maximus
ENSSFOG00015020209	chd9	99	77.719	ENSSDUG00000006139	chd9	96	79.682	Seriola_dumerili
ENSSFOG00015020209	chd9	99	77.177	ENSSLDG00000017818	chd9	96	79.111	Seriola_lalandi_dorsalis
ENSSFOG00015020209	chd9	70	79.078	ENSSARG00000010632	CHD9	70	79.574	Sorex_araneus
ENSSFOG00015020209	chd9	99	77.742	ENSSPAG00000021649	chd9	96	78.891	Stegastes_partitus
ENSSFOG00015020209	chd9	99	67.626	ENSSSCG00000033591	CHD9	75	63.774	Sus_scrofa
ENSSFOG00015020209	chd9	87	73.469	ENSTGUG00000007476	CHD9	100	64.795	Taeniopygia_guttata
ENSSFOG00015020209	chd9	99	74.939	ENSTRUG00000009125	chd9	97	68.537	Takifugu_rubripes
ENSSFOG00015020209	chd9	57	98.246	ENSTNIG00000003825	chd9	85	98.246	Tetraodon_nigroviridis
ENSSFOG00015020209	chd9	61	94.915	ENSTBEG00000016052	-	62	94.915	Tupaia_belangeri
ENSSFOG00015020209	chd9	87	71.914	ENSTTRG00000012674	CHD9	90	63.438	Tursiops_truncatus
ENSSFOG00015020209	chd9	76	68.500	ENSUAMG00000022706	CHD9	97	69.722	Ursus_americanus
ENSSFOG00015020209	chd9	78	87.487	ENSUMAG00000004043	CHD9	95	88.055	Ursus_maritimus
ENSSFOG00015020209	chd9	97	69.394	ENSVPAG00000001374	CHD9	95	71.089	Vicugna_pacos
ENSSFOG00015020209	chd9	99	70.180	ENSVVUG00000019435	CHD9	97	63.567	Vulpes_vulpes
ENSSFOG00015020209	chd9	98	68.460	ENSXETG00000000349	chd9	85	72.552	Xenopus_tropicalis
ENSSFOG00015020209	chd9	97	77.606	ENSXCOG00000012997	chd9	96	77.977	Xiphophorus_couchianus
ENSSFOG00015020209	chd9	97	77.727	ENSXMAG00000016192	chd9	96	78.411	Xiphophorus_maculatus