EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020292 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7362 bases
Position: chrKV410964.1:182871-190232
Accession: 108931861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031713	RRM_1	PF00076.22	5.7e-31	1	2
ENSSFOP00015031713	RRM_1	PF00076.22	5.7e-31	2	2
ENSSFOP00015031701	RRM_1	PF00076.22	8.3e-17	1	1
ENSSFOP00015031682	RRM_1	PF00076.22	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032037	-	411	-	ENSSFOP00015031682	136 (aa)	-	-
ENSSFOT00015032056	-	324	-	ENSSFOP00015031701	107 (aa)	-	-
ENSSFOT00015032068	-	876	XM_018747914	ENSSFOP00015031713	291 (aa)	XP_018603430	-

Gene Model

Click here to download ENSSFOG00015020292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020292	srsf4	82	71.429	ENSSFOG00015015169	SRSF6	59	76.243
ENSSFOG00015020292	srsf4	63	34.667	ENSSFOG00015005346	cirbpb	58	34.259
ENSSFOG00015020292	srsf4	65	37.634	ENSSFOG00015001585	-	79	38.462
ENSSFOG00015020292	srsf4	83	46.281	ENSSFOG00015004800	srsf1a	66	48.780
ENSSFOG00015020292	srsf4	52	47.541	ENSSFOG00015010677	-	55	47.541
ENSSFOG00015020292	srsf4	63	33.333	ENSSFOG00015009951	cirbpa	57	36.449
ENSSFOG00015020292	srsf4	69	42.857	ENSSFOG00015022844	-	63	40.777
ENSSFOG00015020292	srsf4	64	36.232	ENSSFOG00015012924	-	72	35.211
ENSSFOG00015020292	srsf4	79	37.168	ENSSFOG00015017303	srsf9	72	43.407
ENSSFOG00015020292	srsf4	69	41.558	ENSSFOG00015016485	srsf3a	61	40.196
ENSSFOG00015020292	srsf4	83	44.628	ENSSFOG00015004989	-	60	49.091
ENSSFOG00015020292	srsf4	79	41.228	ENSSFOG00015002476	SRSF9	74	42.162
ENSSFOG00015020292	srsf4	63	77.612	ENSSFOG00015008377	srsf5	65	61.828
ENSSFOG00015020292	srsf4	71	80.263	ENSSFOG00015019681	-	53	69.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020292	srsf4	82	85.965	ENSG00000116350	SRSF4	69	90.323	Homo_sapiens
ENSSFOG00015020292	srsf4	82	69.231	ENSAPOG00000023399	-	60	73.034	Acanthochromis_polyacanthus
ENSSFOG00015020292	srsf4	82	88.288	ENSACIG00000018649	srsf4	90	91.597	Amphilophus_citrinellus
ENSSFOG00015020292	srsf4	72	97.403	ENSAOCG00000005997	srsf4	92	91.250	Amphiprion_ocellaris
ENSSFOG00015020292	srsf4	66	97.183	ENSAPEG00000020870	-	65	95.238	Amphiprion_percula
ENSSFOG00015020292	srsf4	79	87.069	ENSATEG00000005680	srsf4	95	67.003	Anabas_testudineus
ENSSFOG00015020292	srsf4	82	85.965	ENSANAG00000037134	SRSF4	56	67.382	Aotus_nancymaae
ENSSFOG00015020292	srsf4	82	68.908	ENSACLG00000021269	-	50	74.317	Astatotilapia_calliptera
ENSSFOG00015020292	srsf4	82	85.586	ENSACLG00000003395	srsf4	72	90.805	Astatotilapia_calliptera
ENSSFOG00015020292	srsf4	82	87.611	ENSAMXG00000034811	srsf4	81	87.952	Astyanax_mexicanus
ENSSFOG00015020292	srsf4	65	67.143	WBGene00004698	rsp-1	97	49.655	Caenorhabditis_elegans
ENSSFOG00015020292	srsf4	85	83.333	ENSCJAG00000047192	SRSF4	59	58.163	Callithrix_jacchus
ENSSFOG00015020292	srsf4	70	64.000	ENSCING00000024718	-	56	56.186	Ciona_intestinalis
ENSSFOG00015020292	srsf4	74	68.750	ENSCING00000020631	-	81	59.391	Ciona_intestinalis
ENSSFOG00015020292	srsf4	72	71.795	ENSCING00000011362	-	65	60.109	Ciona_intestinalis
ENSSFOG00015020292	srsf4	71	72.727	ENSCING00000012370	-	69	61.275	Ciona_intestinalis
ENSSFOG00015020292	srsf4	95	55.556	ENSCSAVG00000002581	-	71	64.516	Ciona_savignyi
ENSSFOG00015020292	srsf4	96	73.529	ENSCSEG00000010058	srsf4	75	88.430	Cynoglossus_semilaevis
ENSSFOG00015020292	srsf4	76	88.889	ENSDARG00000105293	srsf4	79	89.286	Danio_rerio
ENSSFOG00015020292	srsf4	85	53.077	FBgn0004587	B52	96	58.779	Drosophila_melanogaster
ENSSFOG00015020292	srsf4	66	59.341	ENSEBUG00000003129	srsf4	69	61.783	Eptatretus_burgeri
ENSSFOG00015020292	srsf4	97	55.714	ENSEBUG00000001681	srsf4	67	59.218	Eptatretus_burgeri
ENSSFOG00015020292	srsf4	100	58.663	ENSELUG00000017551	srsf4	93	78.462	Esox_lucius
ENSSFOG00015020292	srsf4	82	90.265	ENSFHEG00000007472	srsf4	90	94.048	Fundulus_heteroclitus
ENSSFOG00015020292	srsf4	82	90.351	ENSGMOG00000012906	srsf4	56	92.045	Gadus_morhua
ENSSFOG00015020292	srsf4	82	92.035	ENSGAFG00000018496	srsf4	66	79.348	Gambusia_affinis
ENSSFOG00015020292	srsf4	82	87.640	ENSGACG00000002389	srsf4	55	92.045	Gasterosteus_aculeatus
ENSSFOG00015020292	srsf4	71	96.053	ENSHBUG00000016897	-	79	90.805	Haplochromis_burtoni
ENSSFOG00015020292	srsf4	82	68.908	ENSHBUG00000011326	-	51	74.317	Haplochromis_burtoni
ENSSFOG00015020292	srsf4	72	96.104	ENSHCOG00000012540	srsf4	67	86.264	Hippocampus_comes
ENSSFOG00015020292	srsf4	82	90.090	ENSKMAG00000013631	srsf4	80	77.561	Kryptolebias_marmoratus
ENSSFOG00015020292	srsf4	72	97.403	ENSLBEG00000017163	-	83	90.000	Labrus_bergylta
ENSSFOG00015020292	srsf4	94	82.443	ENSMAMG00000004888	srsf4	68	93.064	Mastacembelus_armatus
ENSSFOG00015020292	srsf4	82	85.586	ENSMZEG00005026275	srsf4	72	90.805	Maylandia_zebra
ENSSFOG00015020292	srsf4	71	96.053	ENSMZEG00005025078	-	78	90.805	Maylandia_zebra
ENSSFOG00015020292	srsf4	82	85.586	ENSMMOG00000013653	srsf4	62	89.474	Mola_mola
ENSSFOG00015020292	srsf4	82	85.965	ENSMODG00000011052	SRSF4	55	85.227	Monodelphis_domestica
ENSSFOG00015020292	srsf4	74	70.886	ENSMALG00000010062	-	94	67.816	Monopterus_albus
ENSSFOG00015020292	srsf4	82	90.991	ENSMALG00000013392	srsf4	66	92.442	Monopterus_albus
ENSSFOG00015020292	srsf4	71	96.053	ENSNBRG00000014840	-	97	76.923	Neolamprologus_brichardi
ENSSFOG00015020292	srsf4	81	64.865	ENSNLEG00000030787	-	62	68.966	Nomascus_leucogenys
ENSSFOG00015020292	srsf4	100	75.455	ENSORLG00000028783	-	95	75.455	Oryzias_latipes
ENSSFOG00015020292	srsf4	72	97.403	ENSORLG00020016052	srsf4	65	92.045	Oryzias_latipes_hni
ENSSFOG00015020292	srsf4	72	97.403	ENSORLG00015007566	srsf4	70	92.045	Oryzias_latipes_hsok
ENSSFOG00015020292	srsf4	72	97.403	ENSOMEG00000005541	srsf4	50	92.045	Oryzias_melastigma
ENSSFOG00015020292	srsf4	72	96.104	ENSPMGG00000013436	srsf4	95	85.039	Periophthalmus_magnuspinnatus
ENSSFOG00015020292	srsf4	82	59.167	ENSPMAG00000009397	srsf4	69	62.903	Petromyzon_marinus
ENSSFOG00015020292	srsf4	93	82.828	ENSPLAG00000008812	srsf4	63	79.444	Poecilia_latipinna
ENSSFOG00015020292	srsf4	93	82.828	ENSPMEG00000023638	srsf4	58	82.915	Poecilia_mexicana
ENSSFOG00015020292	srsf4	82	92.035	ENSPREG00000009639	srsf4	50	91.429	Poecilia_reticulata
ENSSFOG00015020292	srsf4	82	91.892	ENSPNAG00000023844	srsf4	53	94.737	Pygocentrus_nattereri
ENSSFOG00015020292	srsf4	85	83.333	ENSSBOG00000027098	SRSF4	59	58.503	Saimiri_boliviensis_boliviensis
ENSSFOG00015020292	srsf4	62	78.652	ENSSHAG00000012407	SRSF4	50	82.759	Sarcophilus_harrisii
ENSSFOG00015020292	srsf4	72	97.403	ENSSMAG00000001707	srsf4	50	88.950	Scophthalmus_maximus
ENSSFOG00015020292	srsf4	82	90.991	ENSSDUG00000007387	srsf4	95	62.460	Seriola_dumerili
ENSSFOG00015020292	srsf4	82	66.667	ENSSLDG00000009745	srsf4	60	79.070	Seriola_lalandi_dorsalis
ENSSFOG00015020292	srsf4	84	76.667	ENSSPUG00000019124	-	92	84.146	Sphenodon_punctatus
ENSSFOG00015020292	srsf4	89	84.211	ENSSPAG00000014538	srsf4	100	76.056	Stegastes_partitus
ENSSFOG00015020292	srsf4	82	89.189	ENSTRUG00000011891	srsf4	95	64.630	Takifugu_rubripes
ENSSFOG00015020292	srsf4	71	78.947	ENSXCOG00000003212	-	56	70.681	Xiphophorus_couchianus
ENSSFOG00015020292	srsf4	82	89.189	ENSXCOG00000018826	srsf4	89	88.136	Xiphophorus_couchianus
ENSSFOG00015020292	srsf4	72	97.403	ENSXMAG00000021549	-	71	92.857	Xiphophorus_maculatus