EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020295 (Gene tree)
Gene ID: 108921675
Gene Symbol: gfi1
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 3541 bases
Position: chrKV410807.1:6454431-6457971
Accession: 108921675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031725	zf-C2H2	PF00096.26	3.4e-27	1	6
ENSSFOP00015031725	zf-C2H2	PF00096.26	3.4e-27	2	6
ENSSFOP00015031725	zf-C2H2	PF00096.26	3.4e-27	3	6
ENSSFOP00015031725	zf-C2H2	PF00096.26	3.4e-27	4	6
ENSSFOP00015031725	zf-C2H2	PF00096.26	3.4e-27	5	6
ENSSFOP00015031725	zf-C2H2	PF00096.26	3.4e-27	6	6
ENSSFOP00015031739	zf-C2H2	PF00096.26	3.4e-27	1	6
ENSSFOP00015031739	zf-C2H2	PF00096.26	3.4e-27	2	6
ENSSFOP00015031739	zf-C2H2	PF00096.26	3.4e-27	3	6
ENSSFOP00015031739	zf-C2H2	PF00096.26	3.4e-27	4	6
ENSSFOP00015031739	zf-C2H2	PF00096.26	3.4e-27	5	6
ENSSFOP00015031739	zf-C2H2	PF00096.26	3.4e-27	6	6
ENSSFOP00015031711	zf-C2H2	PF00096.26	3.5e-27	1	6
ENSSFOP00015031711	zf-C2H2	PF00096.26	3.5e-27	2	6
ENSSFOP00015031711	zf-C2H2	PF00096.26	3.5e-27	3	6
ENSSFOP00015031711	zf-C2H2	PF00096.26	3.5e-27	4	6
ENSSFOP00015031711	zf-C2H2	PF00096.26	3.5e-27	5	6
ENSSFOP00015031711	zf-C2H2	PF00096.26	3.5e-27	6	6
ENSSFOP00015031725	zf-met	PF12874.7	1e-07	1	1
ENSSFOP00015031711	zf-met	PF12874.7	1.1e-07	1	1
ENSSFOP00015031739	zf-met	PF12874.7	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032080	-	1173	-	ENSSFOP00015031725	390 (aa)	-	-
ENSSFOT00015032094	-	1155	-	ENSSFOP00015031739	384 (aa)	-	-
ENSSFOT00015032066	-	1191	XM_018731275	ENSSFOP00015031711	396 (aa)	XP_018586791	A0A1W4YEQ5

Gene Model

Click here to download ENSSFOG00015020295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020295	gfi1	61	37.736	ENSSFOG00015010128	ZNF521	61	37.736
ENSSFOG00015020295	gfi1	53	42.945	ENSSFOG00015013448	-	87	42.945
ENSSFOG00015020295	gfi1	52	49.533	ENSSFOG00015001123	-	53	49.533
ENSSFOG00015020295	gfi1	61	35.849	ENSSFOG00015007599	ZNF521	56	35.849
ENSSFOG00015020295	gfi1	50	43.396	ENSSFOG00015008994	znf236	59	43.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020295	gfi1	100	64.651	ENSG00000162676	GFI1	100	66.512	Homo_sapiens
ENSSFOG00015020295	gfi1	100	73.881	ENSAPOG00000015189	gfi1ab	100	73.529	Acanthochromis_polyacanthus
ENSSFOG00015020295	gfi1	100	72.222	ENSACIG00000016354	gfi1ab	100	72.222	Amphilophus_citrinellus
ENSSFOG00015020295	gfi1	100	50.117	ENSAOCG00000008339	gfi1ab	100	52.278	Amphiprion_ocellaris
ENSSFOG00015020295	gfi1	100	74.129	ENSAPEG00000023870	gfi1ab	100	73.775	Amphiprion_percula
ENSSFOG00015020295	gfi1	100	68.286	ENSATEG00000009167	gfi1ab	89	68.286	Anabas_testudineus
ENSSFOG00015020295	gfi1	88	71.307	ENSAPLG00000015700	GFI1	99	71.307	Anas_platyrhynchos
ENSSFOG00015020295	gfi1	100	67.146	ENSACAG00000004498	GFI1	100	67.866	Anolis_carolinensis
ENSSFOG00015020295	gfi1	100	65.187	ENSANAG00000019656	GFI1	100	66.822	Aotus_nancymaae
ENSSFOG00015020295	gfi1	100	72.208	ENSACLG00000026458	gfi1ab	93	72.208	Astatotilapia_calliptera
ENSSFOG00015020295	gfi1	100	54.103	ENSAMXG00000006669	GFI1	100	54.103	Astyanax_mexicanus
ENSSFOG00015020295	gfi1	100	68.812	ENSAMXG00000039600	gfi1ab	100	68.812	Astyanax_mexicanus
ENSSFOG00015020295	gfi1	100	58.416	ENSAMXG00000015228	-	96	58.416	Astyanax_mexicanus
ENSSFOG00015020295	gfi1	100	67.366	ENSBTAG00000016723	GFI1	100	67.832	Bos_taurus
ENSSFOG00015020295	gfi1	100	65.814	ENSCJAG00000017609	GFI1	100	65.814	Callithrix_jacchus
ENSSFOG00015020295	gfi1	100	66.589	ENSCAFG00000020155	GFI1	100	67.056	Canis_familiaris
ENSSFOG00015020295	gfi1	100	66.589	ENSCAFG00020013371	GFI1	88	66.822	Canis_lupus_dingo
ENSSFOG00015020295	gfi1	100	66.667	ENSCHIG00000016135	GFI1	100	67.136	Capra_hircus
ENSSFOG00015020295	gfi1	100	66.589	ENSCPOG00000011727	GFI1	100	66.821	Cavia_porcellus
ENSSFOG00015020295	gfi1	100	64.419	ENSCCAG00000036072	GFI1	100	66.047	Cebus_capucinus
ENSSFOG00015020295	gfi1	100	64.884	ENSCATG00000037873	GFI1	100	66.512	Cercocebus_atys
ENSSFOG00015020295	gfi1	100	70.720	ENSCLAG00000005915	GFI1	100	65.533	Chinchilla_lanigera
ENSSFOG00015020295	gfi1	98	61.290	ENSCSAG00000001469	GFI1	100	61.559	Chlorocebus_sabaeus
ENSSFOG00015020295	gfi1	100	64.486	ENSCANG00000034077	GFI1	100	66.355	Colobus_angolensis_palliatus
ENSSFOG00015020295	gfi1	100	64.486	ENSCGRG00001015432	Gfi1	100	65.888	Cricetulus_griseus_chok1gshd
ENSSFOG00015020295	gfi1	100	64.925	ENSCSEG00000017729	GFI1	100	65.174	Cynoglossus_semilaevis
ENSSFOG00015020295	gfi1	100	69.000	ENSCVAG00000011828	gfi1ab	100	69.000	Cyprinodon_variegatus
ENSSFOG00015020295	gfi1	100	60.386	ENSCVAG00000004930	GFI1	100	61.848	Cyprinodon_variegatus
ENSSFOG00015020295	gfi1	100	75.062	ENSDARG00000044457	gfi1ab	100	75.312	Danio_rerio
ENSSFOG00015020295	gfi1	100	66.434	ENSDNOG00000000782	GFI1	97	66.435	Dasypus_novemcinctus
ENSSFOG00015020295	gfi1	100	66.667	ENSEASG00005015509	GFI1	86	67.366	Equus_asinus_asinus
ENSSFOG00015020295	gfi1	91	59.091	ENSECAG00000006647	GFI1	92	59.596	Equus_caballus
ENSSFOG00015020295	gfi1	100	66.033	ENSEEUG00000000198	GFI1	100	66.033	Erinaceus_europaeus
ENSSFOG00015020295	gfi1	100	66.667	ENSELUG00000019033	GFI1	100	66.915	Esox_lucius
ENSSFOG00015020295	gfi1	100	76.368	ENSELUG00000003015	gfi1ab	99	76.368	Esox_lucius
ENSSFOG00015020295	gfi1	100	66.589	ENSFCAG00000005914	GFI1	100	66.821	Felis_catus
ENSSFOG00015020295	gfi1	100	61.205	ENSFHEG00000000341	GFI1	100	64.165	Fundulus_heteroclitus
ENSSFOG00015020295	gfi1	100	70.050	ENSFHEG00000010997	gfi1ab	100	70.050	Fundulus_heteroclitus
ENSSFOG00015020295	gfi1	100	70.823	ENSGMOG00000007737	gfi1ab	100	70.823	Gadus_morhua
ENSSFOG00015020295	gfi1	100	69.903	ENSGALG00000043650	GFI1	100	70.146	Gallus_gallus
ENSSFOG00015020295	gfi1	100	70.762	ENSGAFG00000016637	gfi1ab	100	70.762	Gambusia_affinis
ENSSFOG00015020295	gfi1	100	61.071	ENSGAFG00000018063	GFI1	100	63.990	Gambusia_affinis
ENSSFOG00015020295	gfi1	100	72.727	ENSGACG00000004257	gfi1ab	97	73.067	Gasterosteus_aculeatus
ENSSFOG00015020295	gfi1	100	64.651	ENSGGOG00000005320	GFI1	100	66.512	Gorilla_gorilla
ENSSFOG00015020295	gfi1	100	71.717	ENSHBUG00000011969	gfi1ab	100	71.717	Haplochromis_burtoni
ENSSFOG00015020295	gfi1	100	67.217	ENSHGLG00000008020	GFI1	100	67.290	Heterocephalus_glaber_female
ENSSFOG00015020295	gfi1	100	67.217	ENSHGLG00100000610	GFI1	100	67.290	Heterocephalus_glaber_male
ENSSFOG00015020295	gfi1	100	62.222	ENSHCOG00000019555	GFI1	97	73.684	Hippocampus_comes
ENSSFOG00015020295	gfi1	100	61.353	ENSHCOG00000008590	gfi1ab	100	61.353	Hippocampus_comes
ENSSFOG00015020295	gfi1	100	63.840	ENSIPUG00000013414	GFI1	100	63.840	Ictalurus_punctatus
ENSSFOG00015020295	gfi1	100	68.844	ENSIPUG00000010071	gfi1ab	87	69.095	Ictalurus_punctatus
ENSSFOG00015020295	gfi1	100	65.888	ENSSTOG00000014583	GFI1	100	67.290	Ictidomys_tridecemlineatus
ENSSFOG00015020295	gfi1	100	69.270	ENSKMAG00000003810	gfi1ab	100	69.270	Kryptolebias_marmoratus
ENSSFOG00015020295	gfi1	100	73.232	ENSLBEG00000027776	gfi1ab	100	72.886	Labrus_bergylta
ENSSFOG00015020295	gfi1	99	47.409	ENSLACG00000017590	-	99	47.150	Latimeria_chalumnae
ENSSFOG00015020295	gfi1	100	72.593	ENSLACG00000013362	GFI1	98	73.086	Latimeria_chalumnae
ENSSFOG00015020295	gfi1	100	79.250	ENSLOCG00000004711	gfi1ab	100	80.000	Lepisosteus_oculatus
ENSSFOG00015020295	gfi1	100	64.762	ENSLAFG00000018346	GFI1	100	65.000	Loxodonta_africana
ENSSFOG00015020295	gfi1	100	64.884	ENSMFAG00000045801	GFI1	100	66.512	Macaca_fascicularis
ENSSFOG00015020295	gfi1	100	64.884	ENSMNEG00000036338	GFI1	100	66.512	Macaca_nemestrina
ENSSFOG00015020295	gfi1	100	64.884	ENSMLEG00000036181	GFI1	100	66.512	Mandrillus_leucophaeus
ENSSFOG00015020295	gfi1	100	72.886	ENSMAMG00000008125	gfi1ab	100	72.886	Mastacembelus_armatus
ENSSFOG00015020295	gfi1	100	72.457	ENSMZEG00005009895	gfi1ab	100	72.457	Maylandia_zebra
ENSSFOG00015020295	gfi1	89	70.538	ENSMGAG00000008187	GFI1	100	71.105	Meleagris_gallopavo
ENSSFOG00015020295	gfi1	100	65.421	ENSMICG00000047208	GFI1	100	65.654	Microcebus_murinus
ENSSFOG00015020295	gfi1	100	69.797	ENSMMOG00000005556	gfi1ab	100	69.797	Mola_mola
ENSSFOG00015020295	gfi1	100	65.977	ENSMODG00000011802	GFI1	100	65.977	Monodelphis_domestica
ENSSFOG00015020295	gfi1	100	70.380	ENSMALG00000014672	gfi1ab	100	70.380	Monopterus_albus
ENSSFOG00015020295	gfi1	100	64.802	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSSFOG00015020295	gfi1	100	65.501	ENSMUSG00000029275	Gfi1	100	65.734	Mus_musculus
ENSSFOG00015020295	gfi1	100	65.734	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSSFOG00015020295	gfi1	100	65.734	MGP_SPRETEiJ_G0028507	Gfi1	100	65.967	Mus_spretus
ENSSFOG00015020295	gfi1	100	69.095	ENSMPUG00000004178	GFI1	97	69.849	Mustela_putorius_furo
ENSSFOG00015020295	gfi1	100	66.047	ENSMLUG00000015191	GFI1	97	66.512	Myotis_lucifugus
ENSSFOG00015020295	gfi1	100	71.852	ENSNBRG00000015774	gfi1ab	100	71.852	Neolamprologus_brichardi
ENSSFOG00015020295	gfi1	89	67.539	ENSNLEG00000010470	GFI1	94	67.268	Nomascus_leucogenys
ENSSFOG00015020295	gfi1	100	66.357	ENSOPRG00000001473	GFI1	100	66.589	Ochotona_princeps
ENSSFOG00015020295	gfi1	100	72.208	ENSONIG00000019246	gfi1ab	100	72.208	Oreochromis_niloticus
ENSSFOG00015020295	gfi1	98	60.267	ENSOCUG00000023553	GFI1	93	60.533	Oryctolagus_cuniculus
ENSSFOG00015020295	gfi1	100	69.802	ENSORLG00000013806	gfi1ab	100	69.802	Oryzias_latipes
ENSSFOG00015020295	gfi1	100	63.814	ENSORLG00000005060	GFI1	100	64.059	Oryzias_latipes
ENSSFOG00015020295	gfi1	100	69.727	ENSORLG00020001602	gfi1ab	100	69.727	Oryzias_latipes_hni
ENSSFOG00015020295	gfi1	81	76.923	ENSORLG00020002817	GFI1	99	76.923	Oryzias_latipes_hni
ENSSFOG00015020295	gfi1	100	63.659	ENSORLG00015006070	GFI1	100	64.662	Oryzias_latipes_hsok
ENSSFOG00015020295	gfi1	100	63.861	ENSOMEG00000016722	GFI1	100	64.286	Oryzias_melastigma
ENSSFOG00015020295	gfi1	100	67.857	ENSOGAG00000027913	GFI1	100	68.112	Otolemur_garnettii
ENSSFOG00015020295	gfi1	75	97.143	ENSOARG00000016329	GFI1	94	69.466	Ovis_aries
ENSSFOG00015020295	gfi1	100	68.878	ENSPPAG00000042186	GFI1	100	69.388	Pan_paniscus
ENSSFOG00015020295	gfi1	100	66.589	ENSPPRG00000007521	GFI1	100	66.821	Panthera_pardus
ENSSFOG00015020295	gfi1	100	64.651	ENSPTRG00000043053	GFI1	100	66.512	Pan_troglodytes
ENSSFOG00015020295	gfi1	100	64.884	ENSPANG00000016433	GFI1	100	66.512	Papio_anubis
ENSSFOG00015020295	gfi1	100	84.750	ENSPKIG00000004263	GFI1	100	84.750	Paramormyrops_kingsleyae
ENSSFOG00015020295	gfi1	89	71.751	ENSPSIG00000008734	GFI1	97	72.316	Pelodiscus_sinensis
ENSSFOG00015020295	gfi1	70	75.664	ENSPMGG00000011041	GFI1	83	75.664	Periophthalmus_magnuspinnatus
ENSSFOG00015020295	gfi1	100	69.643	ENSPMGG00000012546	gfi1ab	100	69.898	Periophthalmus_magnuspinnatus
ENSSFOG00015020295	gfi1	100	65.831	ENSPCIG00000013728	GFI1	100	68.160	Phascolarctos_cinereus
ENSSFOG00015020295	gfi1	100	70.516	ENSPFOG00000023214	gfi1ab	100	70.516	Poecilia_formosa
ENSSFOG00015020295	gfi1	78	43.590	ENSPFOG00000024581	-	92	43.590	Poecilia_formosa
ENSSFOG00015020295	gfi1	100	64.706	ENSPLAG00000005376	GFI1	91	64.706	Poecilia_latipinna
ENSSFOG00015020295	gfi1	100	70.516	ENSPLAG00000010879	gfi1ab	100	70.516	Poecilia_latipinna
ENSSFOG00015020295	gfi1	100	70.762	ENSPMEG00000013694	gfi1ab	100	70.762	Poecilia_mexicana
ENSSFOG00015020295	gfi1	100	65.441	ENSPMEG00000019299	GFI1	100	66.993	Poecilia_mexicana
ENSSFOG00015020295	gfi1	100	70.677	ENSPREG00000014097	gfi1ab	100	70.677	Poecilia_reticulata
ENSSFOG00015020295	gfi1	100	57.381	ENSPREG00000007997	GFI1	100	58.095	Poecilia_reticulata
ENSSFOG00015020295	gfi1	100	53.811	ENSPCAG00000011020	GFI1	100	53.811	Procavia_capensis
ENSSFOG00015020295	gfi1	100	64.252	ENSPCOG00000020540	GFI1	100	65.654	Propithecus_coquereli
ENSSFOG00015020295	gfi1	100	65.888	ENSPVAG00000006928	GFI1	100	66.355	Pteropus_vampyrus
ENSSFOG00015020295	gfi1	100	72.208	ENSPNYG00000021183	gfi1ab	100	72.208	Pundamilia_nyererei
ENSSFOG00015020295	gfi1	100	63.010	ENSPNAG00000028014	GFI1	100	63.010	Pygocentrus_nattereri
ENSSFOG00015020295	gfi1	100	56.522	ENSPNAG00000014299	-	98	56.522	Pygocentrus_nattereri
ENSSFOG00015020295	gfi1	100	69.077	ENSPNAG00000027258	gfi1ab	100	69.077	Pygocentrus_nattereri
ENSSFOG00015020295	gfi1	100	65.967	ENSRNOG00000002042	Gfi1	100	66.200	Rattus_norvegicus
ENSSFOG00015020295	gfi1	100	64.651	ENSRBIG00000036467	GFI1	100	66.512	Rhinopithecus_bieti
ENSSFOG00015020295	gfi1	100	64.651	ENSRROG00000031687	GFI1	100	66.512	Rhinopithecus_roxellana
ENSSFOG00015020295	gfi1	100	66.047	ENSSBOG00000031300	GFI1	100	66.279	Saimiri_boliviensis_boliviensis
ENSSFOG00015020295	gfi1	100	71.285	ENSSMAG00000002782	gfi1ab	100	71.322	Scophthalmus_maximus
ENSSFOG00015020295	gfi1	100	71.979	ENSSDUG00000022410	gfi1ab	100	72.237	Seriola_dumerili
ENSSFOG00015020295	gfi1	100	71.979	ENSSLDG00000020163	gfi1ab	100	72.237	Seriola_lalandi_dorsalis
ENSSFOG00015020295	gfi1	82	87.879	ENSSPAG00000009140	gfi1ab	100	90.625	Stegastes_partitus
ENSSFOG00015020295	gfi1	100	66.825	ENSSSCG00000006902	GFI1	100	67.299	Sus_scrofa
ENSSFOG00015020295	gfi1	89	70.655	ENSTGUG00000006060	GFI1	100	71.225	Taeniopygia_guttata
ENSSFOG00015020295	gfi1	100	70.175	ENSTRUG00000000415	gfi1ab	100	70.175	Takifugu_rubripes
ENSSFOG00015020295	gfi1	100	67.005	ENSTNIG00000000651	gfi1ab	97	67.424	Tetraodon_nigroviridis
ENSSFOG00015020295	gfi1	100	65.493	ENSTTRG00000000082	GFI1	100	66.901	Tursiops_truncatus
ENSSFOG00015020295	gfi1	100	68.675	ENSUAMG00000021124	GFI1	91	69.398	Ursus_americanus
ENSSFOG00015020295	gfi1	100	66.750	ENSXETG00000023006	gfi1	98	67.500	Xenopus_tropicalis
ENSSFOG00015020295	gfi1	100	52.958	ENSXMAG00000009274	GFI1	70	59.155	Xiphophorus_maculatus
ENSSFOG00015020295	gfi1	100	71.111	ENSXMAG00000010523	gfi1ab	100	71.111	Xiphophorus_maculatus