EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020304 (Gene tree)
Gene ID: 108920321
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: la-related protein 1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 24976 bases
Position: chrKV411287.1:1416954-1441929
Accession: 108920321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031774	La	PF05383.17	3.8e-21	1	1
ENSSFOP00015031743	La	PF05383.17	3.9e-21	1	1
ENSSFOP00015031702	La	PF05383.17	4.2e-21	1	1
ENSSFOP00015031681	La	PF05383.17	4.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032036	-	3371	XM_018728977	ENSSFOP00015031681	1080 (aa)	XP_018584493	-
ENSSFOT00015032098	-	3169	-	ENSSFOP00015031743	1020 (aa)	-	-
ENSSFOT00015032057	-	3290	-	ENSSFOP00015031702	1053 (aa)	-	-
ENSSFOT00015032130	-	3108	-	ENSSFOP00015031774	1022 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015020304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020304	larp1	96	75.025	ENSSFOG00015018058	-	88	76.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020304	larp1	94	66.802	ENSG00000155506	LARP1	97	67.051	Homo_sapiens
ENSSFOG00015020304	larp1	80	90.476	ENSAPOG00000020685	larp1	85	90.476	Acanthochromis_polyacanthus
ENSSFOG00015020304	larp1	93	67.554	ENSAMEG00000016673	LARP1	96	69.005	Ailuropoda_melanoleuca
ENSSFOG00015020304	larp1	95	70.522	ENSACIG00000012994	larp1	86	71.547	Amphilophus_citrinellus
ENSSFOG00015020304	larp1	83	78.868	ENSAOCG00000007792	larp1	99	78.868	Amphiprion_ocellaris
ENSSFOG00015020304	larp1	95	78.348	ENSAPEG00000022246	larp1	89	78.608	Amphiprion_percula
ENSSFOG00015020304	larp1	94	76.782	ENSATEG00000013523	larp1	88	75.930	Anabas_testudineus
ENSSFOG00015020304	larp1	90	71.005	ENSAPLG00000007559	LARP1	99	72.826	Anas_platyrhynchos
ENSSFOG00015020304	larp1	95	68.818	ENSACAG00000004071	LARP1	95	73.003	Anolis_carolinensis
ENSSFOG00015020304	larp1	94	66.903	ENSANAG00000029949	LARP1	96	66.286	Aotus_nancymaae
ENSSFOG00015020304	larp1	93	78.747	ENSACLG00000015256	larp1	95	78.439	Astatotilapia_calliptera
ENSSFOG00015020304	larp1	97	76.784	ENSAMXG00000000859	larp1	89	79.089	Astyanax_mexicanus
ENSSFOG00015020304	larp1	93	67.901	ENSBTAG00000008443	LARP1	84	69.748	Bos_taurus
ENSSFOG00015020304	larp1	94	66.903	ENSCJAG00000004454	LARP1	95	66.501	Callithrix_jacchus
ENSSFOG00015020304	larp1	93	67.175	ENSCAFG00000017639	LARP1	97	68.815	Canis_familiaris
ENSSFOG00015020304	larp1	85	69.710	ENSCAFG00020023860	LARP1	95	70.169	Canis_lupus_dingo
ENSSFOG00015020304	larp1	93	68.243	ENSCHIG00000014414	LARP1	86	67.188	Capra_hircus
ENSSFOG00015020304	larp1	93	68.061	ENSTSYG00000013732	LARP1	96	66.910	Carlito_syrichta
ENSSFOG00015020304	larp1	82	68.512	ENSCAPG00000013865	LARP1	83	68.750	Cavia_aperea
ENSSFOG00015020304	larp1	93	68.191	ENSCPOG00000003377	LARP1	97	69.479	Cavia_porcellus
ENSSFOG00015020304	larp1	94	66.903	ENSCCAG00000025201	LARP1	95	66.733	Cebus_capucinus
ENSSFOG00015020304	larp1	94	67.105	ENSCATG00000030675	LARP1	97	65.407	Cercocebus_atys
ENSSFOG00015020304	larp1	96	66.667	ENSCLAG00000012755	LARP1	99	66.599	Chinchilla_lanigera
ENSSFOG00015020304	larp1	85	67.338	ENSCSAG00000010800	LARP1	98	66.374	Chlorocebus_sabaeus
ENSSFOG00015020304	larp1	86	65.312	ENSCHOG00000012716	LARP1	85	65.312	Choloepus_hoffmanni
ENSSFOG00015020304	larp1	94	70.898	ENSCPBG00000002173	LARP1	92	72.316	Chrysemys_picta_bellii
ENSSFOG00015020304	larp1	94	67.442	ENSCANG00000037418	LARP1	97	65.795	Colobus_angolensis_palliatus
ENSSFOG00015020304	larp1	95	66.634	ENSCGRG00001016913	Larp1	89	67.915	Cricetulus_griseus_chok1gshd
ENSSFOG00015020304	larp1	93	64.300	ENSCGRG00000009916	Larp1	99	65.789	Cricetulus_griseus_crigri
ENSSFOG00015020304	larp1	94	78.261	ENSCSEG00000016431	larp1	89	78.455	Cynoglossus_semilaevis
ENSSFOG00015020304	larp1	95	77.273	ENSCVAG00000022687	larp1	88	77.245	Cyprinodon_variegatus
ENSSFOG00015020304	larp1	96	70.672	ENSDARG00000101722	larp1	93	72.356	Danio_rerio
ENSSFOG00015020304	larp1	95	65.286	ENSDNOG00000012073	LARP1	84	67.913	Dasypus_novemcinctus
ENSSFOG00015020304	larp1	93	65.524	ENSDORG00000002897	Larp1	96	66.632	Dipodomys_ordii
ENSSFOG00015020304	larp1	89	69.025	ENSETEG00000020251	LARP1	100	70.099	Echinops_telfairi
ENSSFOG00015020304	larp1	93	67.854	ENSEASG00005001070	LARP1	84	68.705	Equus_asinus_asinus
ENSSFOG00015020304	larp1	93	67.376	ENSECAG00000017002	LARP1	67	69.181	Equus_caballus
ENSSFOG00015020304	larp1	91	64.113	ENSEEUG00000001065	LARP1	99	64.360	Erinaceus_europaeus
ENSSFOG00015020304	larp1	94	77.823	ENSELUG00000019403	larp1	87	78.964	Esox_lucius
ENSSFOG00015020304	larp1	93	67.988	ENSFCAG00000000592	LARP1	90	67.756	Felis_catus
ENSSFOG00015020304	larp1	82	72.438	ENSFALG00000008335	LARP1	99	70.318	Ficedula_albicollis
ENSSFOG00015020304	larp1	93	68.196	ENSFDAG00000021125	LARP1	97	69.552	Fukomys_damarensis
ENSSFOG00015020304	larp1	56	70.261	ENSFHEG00000020307	larp1	92	69.653	Fundulus_heteroclitus
ENSSFOG00015020304	larp1	93	71.668	ENSGALG00000040109	LARP1	95	70.103	Gallus_gallus
ENSSFOG00015020304	larp1	93	70.351	ENSGAGG00000025113	LARP1	93	73.714	Gopherus_agassizii
ENSSFOG00015020304	larp1	94	66.802	ENSGGOG00000006048	LARP1	90	68.926	Gorilla_gorilla
ENSSFOG00015020304	larp1	93	79.154	ENSHBUG00000020762	larp1	95	78.844	Haplochromis_burtoni
ENSSFOG00015020304	larp1	91	67.983	ENSHGLG00000006267	LARP1	86	66.533	Heterocephalus_glaber_female
ENSSFOG00015020304	larp1	93	67.821	ENSHGLG00100014230	-	97	69.167	Heterocephalus_glaber_male
ENSSFOG00015020304	larp1	94	58.257	ENSHGLG00100003395	-	88	58.571	Heterocephalus_glaber_male
ENSSFOG00015020304	larp1	82	84.223	ENSHCOG00000010786	larp1	84	80.778	Hippocampus_comes
ENSSFOG00015020304	larp1	95	72.634	ENSIPUG00000019105	Larp1	92	76.677	Ictalurus_punctatus
ENSSFOG00015020304	larp1	94	65.081	ENSSTOG00000005678	LARP1	96	66.875	Ictidomys_tridecemlineatus
ENSSFOG00015020304	larp1	93	64.286	ENSJJAG00000016950	Larp1	87	65.477	Jaculus_jaculus
ENSSFOG00015020304	larp1	93	78.986	ENSKMAG00000018468	larp1	98	77.677	Kryptolebias_marmoratus
ENSSFOG00015020304	larp1	95	75.177	ENSLBEG00000027172	larp1	87	75.848	Labrus_bergylta
ENSSFOG00015020304	larp1	90	79.870	ENSLOCG00000012457	larp1	92	81.788	Lepisosteus_oculatus
ENSSFOG00015020304	larp1	95	65.873	ENSLAFG00000008991	LARP1	86	68.377	Loxodonta_africana
ENSSFOG00015020304	larp1	94	67.004	ENSMFAG00000031651	LARP1	97	65.310	Macaca_fascicularis
ENSSFOG00015020304	larp1	93	64.556	ENSMMUG00000009411	LARP1	99	64.909	Macaca_mulatta
ENSSFOG00015020304	larp1	90	65.507	ENSMNEG00000039294	LARP1	98	68.496	Macaca_nemestrina
ENSSFOG00015020304	larp1	94	67.206	ENSMLEG00000035142	LARP1	97	65.504	Mandrillus_leucophaeus
ENSSFOG00015020304	larp1	95	79.145	ENSMAMG00000021788	larp1	88	78.248	Mastacembelus_armatus
ENSSFOG00015020304	larp1	93	78.747	ENSMZEG00005009345	larp1	95	78.439	Maylandia_zebra
ENSSFOG00015020304	larp1	95	69.386	ENSMGAG00000005696	LARP1	99	70.971	Meleagris_gallopavo
ENSSFOG00015020304	larp1	95	66.535	ENSMAUG00000001385	Larp1	89	67.814	Mesocricetus_auratus
ENSSFOG00015020304	larp1	93	66.701	ENSMICG00000000837	LARP1	95	70.701	Microcebus_murinus
ENSSFOG00015020304	larp1	93	68.024	ENSMOCG00000008920	Larp1	86	69.375	Microtus_ochrogaster
ENSSFOG00015020304	larp1	89	58.218	ENSMMOG00000013364	larp1	83	61.262	Mola_mola
ENSSFOG00015020304	larp1	95	67.904	ENSMODG00000008663	LARP1	99	68.852	Monodelphis_domestica
ENSSFOG00015020304	larp1	95	77.944	ENSMALG00000017180	larp1	96	74.757	Monopterus_albus
ENSSFOG00015020304	larp1	95	66.733	MGP_CAROLIEiJ_G0016383	Larp1	89	68.016	Mus_caroli
ENSSFOG00015020304	larp1	95	66.931	ENSMUSG00000037331	Larp1	89	68.219	Mus_musculus
ENSSFOG00015020304	larp1	95	66.832	MGP_PahariEiJ_G0017518	Larp1	88	68.117	Mus_pahari
ENSSFOG00015020304	larp1	95	66.931	MGP_SPRETEiJ_G0017225	Larp1	89	68.219	Mus_spretus
ENSSFOG00015020304	larp1	77	65.037	ENSMPUG00000013564	LARP1	84	66.457	Mustela_putorius_furo
ENSSFOG00015020304	larp1	93	64.424	ENSMLUG00000002608	LARP1	97	66.215	Myotis_lucifugus
ENSSFOG00015020304	larp1	95	65.388	ENSNGAG00000001098	Larp1	98	65.856	Nannospalax_galili
ENSSFOG00015020304	larp1	93	76.963	ENSNBRG00000008963	larp1	92	78.275	Neolamprologus_brichardi
ENSSFOG00015020304	larp1	94	65.685	ENSNLEG00000016588	LARP1	96	66.420	Nomascus_leucogenys
ENSSFOG00015020304	larp1	94	63.866	ENSMEUG00000002957	LARP1	99	64.410	Notamacropus_eugenii
ENSSFOG00015020304	larp1	93	68.270	ENSOPRG00000013014	LARP1	99	68.718	Ochotona_princeps
ENSSFOG00015020304	larp1	94	67.674	ENSODEG00000010824	LARP1	99	68.464	Octodon_degus
ENSSFOG00015020304	larp1	93	77.938	ENSONIG00000017308	larp1	86	78.542	Oreochromis_niloticus
ENSSFOG00015020304	larp1	97	67.840	ENSOANG00000005096	LARP1	99	69.177	Ornithorhynchus_anatinus
ENSSFOG00015020304	larp1	93	67.719	ENSOCUG00000013066	LARP1	92	65.304	Oryctolagus_cuniculus
ENSSFOG00015020304	larp1	95	76.089	ENSORLG00000000824	larp1	96	78.408	Oryzias_latipes
ENSSFOG00015020304	larp1	95	75.988	ENSORLG00020022241	larp1	86	78.141	Oryzias_latipes_hni
ENSSFOG00015020304	larp1	95	74.265	ENSORLG00015007538	larp1	86	77.825	Oryzias_latipes_hsok
ENSSFOG00015020304	larp1	95	75.887	ENSOMEG00000003134	larp1	87	78.059	Oryzias_melastigma
ENSSFOG00015020304	larp1	95	65.974	ENSOGAG00000016750	LARP1	99	67.513	Otolemur_garnettii
ENSSFOG00015020304	larp1	93	66.838	ENSOARG00000009893	LARP1	98	67.360	Ovis_aries
ENSSFOG00015020304	larp1	94	66.802	ENSPPAG00000042993	LARP1	90	68.926	Pan_paniscus
ENSSFOG00015020304	larp1	93	66.768	ENSPPRG00000009780	LARP1	94	66.431	Panthera_pardus
ENSSFOG00015020304	larp1	93	66.870	ENSPTIG00000007013	LARP1	93	66.835	Panthera_tigris_altaica
ENSSFOG00015020304	larp1	94	66.903	ENSPTRG00000017447	LARP1	90	69.030	Pan_troglodytes
ENSSFOG00015020304	larp1	93	67.347	ENSPANG00000008080	LARP1	97	65.407	Papio_anubis
ENSSFOG00015020304	larp1	96	70.630	ENSPKIG00000017153	-	86	74.501	Paramormyrops_kingsleyae
ENSSFOG00015020304	larp1	97	80.101	ENSPKIG00000010096	larp1	89	82.884	Paramormyrops_kingsleyae
ENSSFOG00015020304	larp1	91	73.987	ENSPMGG00000011599	larp1	91	76.356	Periophthalmus_magnuspinnatus
ENSSFOG00015020304	larp1	96	64.458	ENSPEMG00000022523	Larp1	99	65.486	Peromyscus_maniculatus_bairdii
ENSSFOG00015020304	larp1	93	69.462	ENSPCIG00000019242	LARP1	79	70.662	Phascolarctos_cinereus
ENSSFOG00015020304	larp1	95	75.637	ENSPFOG00000005836	larp1	88	74.346	Poecilia_formosa
ENSSFOG00015020304	larp1	95	75.331	ENSPLAG00000008936	larp1	88	75.823	Poecilia_latipinna
ENSSFOG00015020304	larp1	95	76.045	ENSPMEG00000013656	larp1	88	74.675	Poecilia_mexicana
ENSSFOG00015020304	larp1	93	76.739	ENSPREG00000005726	larp1	98	74.573	Poecilia_reticulata
ENSSFOG00015020304	larp1	93	65.949	ENSPCAG00000006407	LARP1	97	67.192	Procavia_capensis
ENSSFOG00015020304	larp1	93	60.652	ENSPCOG00000016949	LARP1	96	64.792	Propithecus_coquereli
ENSSFOG00015020304	larp1	93	67.861	ENSPVAG00000002262	LARP1	84	69.215	Pteropus_vampyrus
ENSSFOG00015020304	larp1	93	78.747	ENSPNYG00000007938	larp1	95	78.439	Pundamilia_nyererei
ENSSFOG00015020304	larp1	96	78.265	ENSPNAG00000021427	larp1	90	79.979	Pygocentrus_nattereri
ENSSFOG00015020304	larp1	95	64.854	ENSRNOG00000031544	Larp1	95	67.049	Rattus_norvegicus
ENSSFOG00015020304	larp1	94	67.004	ENSRBIG00000038005	LARP1	97	65.601	Rhinopithecus_bieti
ENSSFOG00015020304	larp1	94	67.004	ENSRROG00000034073	LARP1	98	68.825	Rhinopithecus_roxellana
ENSSFOG00015020304	larp1	93	67.314	ENSSBOG00000019816	LARP1	96	66.528	Saimiri_boliviensis_boliviensis
ENSSFOG00015020304	larp1	95	69.060	ENSSHAG00000011115	LARP1	99	70.363	Sarcophilus_harrisii
ENSSFOG00015020304	larp1	90	76.356	ENSSMAG00000007468	larp1	85	79.581	Scophthalmus_maximus
ENSSFOG00015020304	larp1	95	77.822	ENSSDUG00000000268	larp1	97	75.282	Seriola_dumerili
ENSSFOG00015020304	larp1	87	75.561	ENSSLDG00000016505	larp1	97	75.056	Seriola_lalandi_dorsalis
ENSSFOG00015020304	larp1	56	84.800	ENSSARG00000013907	-	84	84.585	Sorex_araneus
ENSSFOG00015020304	larp1	95	69.605	ENSSPUG00000012179	-	86	70.812	Sphenodon_punctatus
ENSSFOG00015020304	larp1	95	77.656	ENSSPAG00000003910	larp1	88	77.980	Stegastes_partitus
ENSSFOG00015020304	larp1	93	67.719	ENSSSCG00000017069	LARP1	98	68.519	Sus_scrofa
ENSSFOG00015020304	larp1	92	70.000	ENSTGUG00000000704	LARP1	100	71.928	Taeniopygia_guttata
ENSSFOG00015020304	larp1	95	75.300	ENSTRUG00000009470	larp1	88	76.313	Takifugu_rubripes
ENSSFOG00015020304	larp1	90	66.455	ENSTBEG00000003381	LARP1	100	67.822	Tupaia_belangeri
ENSSFOG00015020304	larp1	89	68.187	ENSTTRG00000015934	LARP1	97	68.991	Tursiops_truncatus
ENSSFOG00015020304	larp1	93	67.930	ENSUAMG00000019334	LARP1	84	69.287	Ursus_americanus
ENSSFOG00015020304	larp1	93	66.117	ENSUMAG00000002934	LARP1	96	69.677	Ursus_maritimus
ENSSFOG00015020304	larp1	85	69.710	ENSVVUG00000004644	LARP1	95	70.169	Vulpes_vulpes
ENSSFOG00015020304	larp1	93	71.086	ENSXETG00000008413	larp1	92	70.945	Xenopus_tropicalis
ENSSFOG00015020304	larp1	78	75.762	ENSXCOG00000004022	larp1	83	75.729	Xiphophorus_couchianus
ENSSFOG00015020304	larp1	93	76.739	ENSXMAG00000018780	larp1	88	74.624	Xiphophorus_maculatus