EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020384 (Gene tree)
Gene ID: 108936985
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 13770 bases
Position: chrKV411132.1:1640068-1653837
Accession: 108936985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031828	RRM_1	PF00076.22	1.5e-17	1	1
ENSSFOP00015031853	RRM_1	PF00076.22	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032185	-	3913	XM_018756675	ENSSFOP00015031828	242 (aa)	XP_018612191	A0A1W5AH72
ENSSFOT00015032210	-	621	-	ENSSFOP00015031853	206 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015020384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020384's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020384	-	51	41.176	ENSSFOG00015007588	-	50	41.176
ENSSFOG00015020384	-	98	71.429	ENSSFOG00015004453	rbm38	100	70.782
ENSSFOG00015020384	-	66	77.206	ENSSFOG00015011094	rbm24a	60	77.206
ENSSFOG00015020384	-	97	52.252	ENSSFOG00015000915	rbm24b	100	47.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020384	-	93	54.331	ENSG00000112183	RBM24	94	81.333	Homo_sapiens
ENSSFOG00015020384	-	93	57.676	ENSAPOG00000000789	rbm24b	99	60.484	Acanthochromis_polyacanthus
ENSSFOG00015020384	-	100	59.052	ENSAPOG00000019514	rbm24a	100	61.638	Acanthochromis_polyacanthus
ENSSFOG00015020384	-	100	60.345	ENSACIG00000010987	rbm24a	100	60.345	Amphilophus_citrinellus
ENSSFOG00015020384	-	91	54.852	ENSACIG00000015650	rbm24b	100	57.661	Amphilophus_citrinellus
ENSSFOG00015020384	-	100	59.052	ENSAOCG00000000378	rbm24a	100	61.638	Amphiprion_ocellaris
ENSSFOG00015020384	-	93	57.676	ENSAOCG00000023764	rbm24b	99	60.484	Amphiprion_ocellaris
ENSSFOG00015020384	-	100	59.052	ENSAPEG00000012234	rbm24a	100	61.638	Amphiprion_percula
ENSSFOG00015020384	-	93	57.676	ENSAPEG00000010059	rbm24b	99	60.484	Amphiprion_percula
ENSSFOG00015020384	-	100	56.410	ENSATEG00000014195	rbm24a	100	60.086	Anabas_testudineus
ENSSFOG00015020384	-	99	53.252	ENSATEG00000005396	rbm24b	100	59.289	Anabas_testudineus
ENSSFOG00015020384	-	100	58.442	ENSACAG00000003962	RBM24	100	62.338	Anolis_carolinensis
ENSSFOG00015020384	-	93	54.331	ENSANAG00000029310	RBM24	100	61.181	Aotus_nancymaae
ENSSFOG00015020384	-	97	53.086	ENSACLG00000004207	rbm24b	100	58.498	Astatotilapia_calliptera
ENSSFOG00015020384	-	100	59.149	ENSACLG00000016929	rbm24a	100	59.149	Astatotilapia_calliptera
ENSSFOG00015020384	-	100	57.391	ENSAMXG00000040572	rbm24a	100	61.739	Astyanax_mexicanus
ENSSFOG00015020384	-	93	54.331	ENSBTAG00000015396	RBM24	100	61.181	Bos_taurus
ENSSFOG00015020384	-	93	54.331	ENSCJAG00000006579	RBM24	100	61.181	Callithrix_jacchus
ENSSFOG00015020384	-	57	71.795	ENSCAFG00000009942	-	100	71.795	Canis_familiaris
ENSSFOG00015020384	-	73	71.154	ENSCAFG00020012640	RBM24	100	60.084	Canis_lupus_dingo
ENSSFOG00015020384	-	100	53.846	ENSCHIG00000013536	RBM24	100	55.983	Capra_hircus
ENSSFOG00015020384	-	52	68.468	ENSTSYG00000031245	RBM24	82	56.186	Carlito_syrichta
ENSSFOG00015020384	-	93	54.331	ENSCPOG00000038459	RBM24	100	61.181	Cavia_porcellus
ENSSFOG00015020384	-	95	54.054	ENSCCAG00000030791	RBM24	95	59.200	Cebus_capucinus
ENSSFOG00015020384	-	95	54.054	ENSCATG00000010509	RBM24	96	59.200	Cercocebus_atys
ENSSFOG00015020384	-	93	54.331	ENSCLAG00000002136	RBM24	100	61.181	Chinchilla_lanigera
ENSSFOG00015020384	-	93	54.331	ENSCSAG00000007599	RBM24	100	61.181	Chlorocebus_sabaeus
ENSSFOG00015020384	-	100	60.352	ENSCPBG00000008291	RBM24	100	64.317	Chrysemys_picta_bellii
ENSSFOG00015020384	-	95	54.054	ENSCANG00000030245	RBM24	96	59.200	Colobus_angolensis_palliatus
ENSSFOG00015020384	-	93	55.118	ENSCGRG00001010535	Rbm24	100	62.025	Cricetulus_griseus_chok1gshd
ENSSFOG00015020384	-	93	55.118	ENSCGRG00000011732	Rbm24	100	62.025	Cricetulus_griseus_crigri
ENSSFOG00015020384	-	93	54.800	ENSCSEG00000017958	rbm24a	100	60.515	Cynoglossus_semilaevis
ENSSFOG00015020384	-	93	55.556	ENSCSEG00000004378	rbm24b	90	58.298	Cynoglossus_semilaevis
ENSSFOG00015020384	-	85	65.608	ENSCVAG00000020675	rbm24a	100	59.483	Cyprinodon_variegatus
ENSSFOG00015020384	-	93	57.787	ENSCVAG00000011805	rbm24b	99	58.964	Cyprinodon_variegatus
ENSSFOG00015020384	-	100	59.740	ENSDARG00000102995	rbm24a	100	79.487	Danio_rerio
ENSSFOG00015020384	-	54	81.982	ENSDARG00000031809	rbm24b	90	74.219	Danio_rerio
ENSSFOG00015020384	-	93	54.331	ENSDORG00000028400	Rbm24	100	61.181	Dipodomys_ordii
ENSSFOG00015020384	-	64	72.932	ENSEBUG00000008945	rbm24a	68	72.932	Eptatretus_burgeri
ENSSFOG00015020384	-	93	58.000	ENSEBUG00000003787	-	89	56.633	Eptatretus_burgeri
ENSSFOG00015020384	-	93	54.331	ENSEASG00005011789	RBM24	100	61.181	Equus_asinus_asinus
ENSSFOG00015020384	-	93	54.331	ENSECAG00000009819	RBM24	100	61.181	Equus_caballus
ENSSFOG00015020384	-	100	56.897	ENSELUG00000007163	rbm24a	100	62.771	Esox_lucius
ENSSFOG00015020384	-	91	58.051	ENSELUG00000002970	-	99	60.408	Esox_lucius
ENSSFOG00015020384	-	93	54.331	ENSFCAG00000046251	RBM24	100	61.181	Felis_catus
ENSSFOG00015020384	-	100	62.332	ENSFALG00000013398	RBM24	89	60.000	Ficedula_albicollis
ENSSFOG00015020384	-	93	43.852	ENSFHEG00000015627	rbm24b	100	45.418	Fundulus_heteroclitus
ENSSFOG00015020384	-	85	65.104	ENSFHEG00000013449	rbm24a	100	59.574	Fundulus_heteroclitus
ENSSFOG00015020384	-	66	75.735	ENSGMOG00000010412	rbm24a	65	72.222	Gadus_morhua
ENSSFOG00015020384	-	93	58.848	ENSGMOG00000007015	rbm24b	100	57.025	Gadus_morhua
ENSSFOG00015020384	-	56	49.138	ENSGMOG00000016348	-	100	49.138	Gadus_morhua
ENSSFOG00015020384	-	73	72.903	ENSGALG00000012712	RBM24	100	63.717	Gallus_gallus
ENSSFOG00015020384	-	97	69.604	ENSGAFG00000020326	-	100	68.127	Gambusia_affinis
ENSSFOG00015020384	-	99	55.794	ENSGAFG00000013304	-	100	57.083	Gambusia_affinis
ENSSFOG00015020384	-	85	64.921	ENSGAFG00000010968	rbm24a	100	60.000	Gambusia_affinis
ENSSFOG00015020384	-	93	57.787	ENSGAFG00000006003	rbm24b	100	58.964	Gambusia_affinis
ENSSFOG00015020384	-	100	60.633	ENSGACG00000005383	rbm24a	100	62.780	Gasterosteus_aculeatus
ENSSFOG00015020384	-	99	62.500	ENSGACG00000008472	rbm24b	100	60.504	Gasterosteus_aculeatus
ENSSFOG00015020384	-	100	60.793	ENSGAGG00000016571	RBM24	100	64.758	Gopherus_agassizii
ENSSFOG00015020384	-	95	54.054	ENSGGOG00000039093	RBM24	96	59.200	Gorilla_gorilla
ENSSFOG00015020384	-	100	59.149	ENSHBUG00000003071	rbm24a	100	59.149	Haplochromis_burtoni
ENSSFOG00015020384	-	97	53.086	ENSHBUG00000017155	rbm24b	100	58.498	Haplochromis_burtoni
ENSSFOG00015020384	-	93	53.937	ENSHGLG00000008335	RBM24	100	60.759	Heterocephalus_glaber_female
ENSSFOG00015020384	-	91	57.438	ENSHCOG00000000137	rbm24b	100	60.079	Hippocampus_comes
ENSSFOG00015020384	-	57	79.487	ENSHCOG00000019356	rbm24a	100	79.487	Hippocampus_comes
ENSSFOG00015020384	-	66	76.471	ENSIPUG00000014727	rbm24	100	60.851	Ictalurus_punctatus
ENSSFOG00015020384	-	93	54.724	ENSSTOG00000022090	RBM24	100	61.181	Ictidomys_tridecemlineatus
ENSSFOG00015020384	-	100	58.228	ENSJJAG00000021705	Rbm24	100	62.025	Jaculus_jaculus
ENSSFOG00015020384	-	83	80.000	ENSKMAG00000006096	-	80	73.239	Kryptolebias_marmoratus
ENSSFOG00015020384	-	85	65.789	ENSKMAG00000006314	rbm24a	100	60.086	Kryptolebias_marmoratus
ENSSFOG00015020384	-	93	53.219	ENSKMAG00000014458	rbm24b	100	54.113	Kryptolebias_marmoratus
ENSSFOG00015020384	-	100	56.410	ENSLBEG00000003025	rbm24a	100	60.086	Labrus_bergylta
ENSSFOG00015020384	-	91	57.983	ENSLBEG00000000774	rbm24b	99	59.839	Labrus_bergylta
ENSSFOG00015020384	-	100	57.692	ENSLACG00000011111	RBM24	100	60.515	Latimeria_chalumnae
ENSSFOG00015020384	-	100	58.009	ENSLOCG00000006244	rbm24a	100	61.039	Lepisosteus_oculatus
ENSSFOG00015020384	-	100	57.642	ENSLAFG00000000116	RBM24	100	62.222	Loxodonta_africana
ENSSFOG00015020384	-	95	54.054	ENSMFAG00000034396	RBM24	100	61.181	Macaca_fascicularis
ENSSFOG00015020384	-	93	54.331	ENSMMUG00000011384	RBM24	94	81.333	Macaca_mulatta
ENSSFOG00015020384	-	95	54.054	ENSMNEG00000040710	RBM24	96	59.200	Macaca_nemestrina
ENSSFOG00015020384	-	100	57.082	ENSMAMG00000013172	rbm24a	100	60.944	Mastacembelus_armatus
ENSSFOG00015020384	-	99	54.286	ENSMAMG00000012841	rbm24b	99	60.345	Mastacembelus_armatus
ENSSFOG00015020384	-	100	59.149	ENSMZEG00005004491	rbm24a	100	59.149	Maylandia_zebra
ENSSFOG00015020384	-	97	53.086	ENSMZEG00005014397	rbm24b	100	58.498	Maylandia_zebra
ENSSFOG00015020384	-	93	55.118	ENSMAUG00000011281	Rbm24	100	62.025	Mesocricetus_auratus
ENSSFOG00015020384	-	100	59.130	ENSMICG00000032332	RBM24	93	63.043	Microcebus_murinus
ENSSFOG00015020384	-	93	55.118	ENSMOCG00000016637	Rbm24	100	62.025	Microtus_ochrogaster
ENSSFOG00015020384	-	66	77.778	ENSMMOG00000019054	rbm24a	64	77.778	Mola_mola
ENSSFOG00015020384	-	93	57.676	ENSMMOG00000001750	rbm24b	91	76.800	Mola_mola
ENSSFOG00015020384	-	73	72.727	ENSMODG00000010899	RBM24	90	61.441	Monodelphis_domestica
ENSSFOG00015020384	-	99	55.794	ENSMALG00000011585	rbm24b	99	60.086	Monopterus_albus
ENSSFOG00015020384	-	100	61.429	ENSMALG00000014068	rbm24a	89	60.648	Monopterus_albus
ENSSFOG00015020384	-	93	55.118	MGP_CAROLIEiJ_G0018481	Rbm24	100	62.025	Mus_caroli
ENSSFOG00015020384	-	93	55.118	ENSMUSG00000038132	Rbm24	100	62.025	Mus_musculus
ENSSFOG00015020384	-	93	55.118	MGP_PahariEiJ_G0019548	Rbm24	100	62.025	Mus_pahari
ENSSFOG00015020384	-	93	55.118	MGP_SPRETEiJ_G0019360	Rbm24	100	62.025	Mus_spretus
ENSSFOG00015020384	-	93	58.468	ENSNGAG00000013939	Rbm24	100	61.603	Nannospalax_galili
ENSSFOG00015020384	-	100	59.149	ENSNBRG00000012347	rbm24a	100	59.149	Neolamprologus_brichardi
ENSSFOG00015020384	-	91	56.962	ENSNBRG00000015853	rbm24b	100	59.684	Neolamprologus_brichardi
ENSSFOG00015020384	-	73	72.078	ENSNLEG00000001075	RBM24	95	67.021	Nomascus_leucogenys
ENSSFOG00015020384	-	73	49.677	ENSMEUG00000015492	RBM24	99	47.034	Notamacropus_eugenii
ENSSFOG00015020384	-	70	60.135	ENSOPRG00000012150	-	99	53.086	Ochotona_princeps
ENSSFOG00015020384	-	93	54.331	ENSODEG00000006411	RBM24	100	61.181	Octodon_degus
ENSSFOG00015020384	-	99	58.974	ENSONIG00000002504	rbm24a	95	58.974	Oreochromis_niloticus
ENSSFOG00015020384	-	91	57.384	ENSONIG00000003010	rbm24b	100	60.081	Oreochromis_niloticus
ENSSFOG00015020384	-	78	72.289	ENSOANG00000011865	RBM24	91	72.903	Ornithorhynchus_anatinus
ENSSFOG00015020384	-	93	57.025	ENSORLG00000007916	rbm24b	99	60.241	Oryzias_latipes
ENSSFOG00015020384	-	73	69.872	ENSORLG00000012546	rbm24a	100	60.086	Oryzias_latipes
ENSSFOG00015020384	-	93	57.025	ENSORLG00020014541	rbm24b	99	60.241	Oryzias_latipes_hni
ENSSFOG00015020384	-	73	69.872	ENSORLG00020005859	rbm24a	100	60.086	Oryzias_latipes_hni
ENSSFOG00015020384	-	93	57.025	ENSORLG00015000583	rbm24b	99	60.241	Oryzias_latipes_hsok
ENSSFOG00015020384	-	73	69.872	ENSORLG00015013567	rbm24a	100	59.052	Oryzias_latipes_hsok
ENSSFOG00015020384	-	100	59.657	ENSOMEG00000011760	rbm24a	100	60.086	Oryzias_melastigma
ENSSFOG00015020384	-	93	56.790	ENSOMEG00000021525	rbm24b	99	60.000	Oryzias_melastigma
ENSSFOG00015020384	-	93	54.331	ENSOGAG00000027311	RBM24	100	61.181	Otolemur_garnettii
ENSSFOG00015020384	-	93	54.331	ENSPPRG00000005000	RBM24	100	61.181	Panthera_pardus
ENSSFOG00015020384	-	95	54.054	ENSPTRG00000017749	RBM24	95	59.200	Pan_troglodytes
ENSSFOG00015020384	-	93	54.331	ENSPANG00000033323	RBM24	100	61.181	Papio_anubis
ENSSFOG00015020384	-	100	61.304	ENSPKIG00000001701	rbm24a	100	61.739	Paramormyrops_kingsleyae
ENSSFOG00015020384	-	100	56.897	ENSPKIG00000019760	-	100	58.621	Paramormyrops_kingsleyae
ENSSFOG00015020384	-	100	58.009	ENSPSIG00000006920	RBM24	100	61.905	Pelodiscus_sinensis
ENSSFOG00015020384	-	99	61.739	ENSPMGG00000011993	rbm24b	94	73.846	Periophthalmus_magnuspinnatus
ENSSFOG00015020384	-	57	79.487	ENSPMGG00000001730	rbm24a	100	79.487	Periophthalmus_magnuspinnatus
ENSSFOG00015020384	-	97	55.042	ENSPMAG00000005910	rbm24a	98	52.479	Petromyzon_marinus
ENSSFOG00015020384	-	93	54.941	ENSPCIG00000029674	RBM24	100	61.864	Phascolarctos_cinereus
ENSSFOG00015020384	-	98	68.379	ENSPFOG00000005096	-	100	69.048	Poecilia_formosa
ENSSFOG00015020384	-	100	59.402	ENSPFOG00000013132	rbm24a	100	59.402	Poecilia_formosa
ENSSFOG00015020384	-	97	59.471	ENSPLAG00000006542	rbm24a	91	59.471	Poecilia_latipinna
ENSSFOG00015020384	-	93	57.787	ENSPLAG00000019473	rbm24b	100	58.964	Poecilia_latipinna
ENSSFOG00015020384	-	97	70.044	ENSPMEG00000020921	-	100	68.526	Poecilia_mexicana
ENSSFOG00015020384	-	91	57.500	ENSPMEG00000009382	-	100	58.566	Poecilia_mexicana
ENSSFOG00015020384	-	91	57.500	ENSPMEG00000022792	rbm24b	100	58.566	Poecilia_mexicana
ENSSFOG00015020384	-	100	59.402	ENSPMEG00000021740	rbm24a	100	59.402	Poecilia_mexicana
ENSSFOG00015020384	-	93	57.787	ENSPREG00000000762	rbm24b	100	58.964	Poecilia_reticulata
ENSSFOG00015020384	-	100	60.811	ENSPREG00000007414	rbm24a	100	59.149	Poecilia_reticulata
ENSSFOG00015020384	-	97	75.120	ENSPREG00000016652	-	97	74.641	Poecilia_reticulata
ENSSFOG00015020384	-	93	54.331	ENSPPYG00000016256	RBM24	100	61.181	Pongo_abelii
ENSSFOG00015020384	-	73	72.078	ENSPCAG00000015152	RBM24	100	60.924	Procavia_capensis
ENSSFOG00015020384	-	95	54.054	ENSPCOG00000015077	RBM24	100	61.181	Propithecus_coquereli
ENSSFOG00015020384	-	93	54.331	ENSPVAG00000004954	RBM24	100	61.181	Pteropus_vampyrus
ENSSFOG00015020384	-	97	53.086	ENSPNYG00000015684	rbm24b	100	58.498	Pundamilia_nyererei
ENSSFOG00015020384	-	100	59.149	ENSPNYG00000011118	rbm24a	100	59.149	Pundamilia_nyererei
ENSSFOG00015020384	-	99	62.389	ENSPNAG00000018604	rbm24b	99	61.333	Pygocentrus_nattereri
ENSSFOG00015020384	-	100	57.082	ENSPNAG00000003816	rbm24a	100	61.638	Pygocentrus_nattereri
ENSSFOG00015020384	-	97	57.759	ENSRNOG00000046547	Rbm24	100	60.569	Rattus_norvegicus
ENSSFOG00015020384	-	95	54.054	ENSRBIG00000044451	RBM24	100	61.181	Rhinopithecus_bieti
ENSSFOG00015020384	-	95	54.054	ENSRROG00000029486	RBM24	100	61.181	Rhinopithecus_roxellana
ENSSFOG00015020384	-	93	54.331	ENSSBOG00000030002	RBM24	100	61.181	Saimiri_boliviensis_boliviensis
ENSSFOG00015020384	-	73	72.258	ENSSHAG00000016729	RBM24	92	61.441	Sarcophilus_harrisii
ENSSFOG00015020384	-	100	55.745	ENSSMAG00000008449	rbm24a	100	59.829	Scophthalmus_maximus
ENSSFOG00015020384	-	91	56.303	ENSSMAG00000020117	rbm24b	85	57.874	Scophthalmus_maximus
ENSSFOG00015020384	-	100	56.652	ENSSDUG00000010760	rbm24a	100	60.776	Seriola_dumerili
ENSSFOG00015020384	-	99	53.659	ENSSDUG00000005955	rbm24b	99	60.086	Seriola_dumerili
ENSSFOG00015020384	-	100	56.652	ENSSLDG00000012657	rbm24a	100	60.776	Seriola_lalandi_dorsalis
ENSSFOG00015020384	-	99	53.252	ENSSLDG00000015378	rbm24b	99	59.657	Seriola_lalandi_dorsalis
ENSSFOG00015020384	-	100	61.739	ENSSPUG00000016665	RBM24	100	62.609	Sphenodon_punctatus
ENSSFOG00015020384	-	93	57.676	ENSSPAG00000007941	rbm24b	99	60.484	Stegastes_partitus
ENSSFOG00015020384	-	100	57.511	ENSSPAG00000014990	rbm24a	100	60.776	Stegastes_partitus
ENSSFOG00015020384	-	93	54.331	ENSSSCG00000038455	RBM24	100	61.181	Sus_scrofa
ENSSFOG00015020384	-	73	72.903	ENSTGUG00000005984	RBM24	100	62.996	Taeniopygia_guttata
ENSSFOG00015020384	-	91	56.780	ENSTRUG00000014826	rbm24b	99	59.919	Takifugu_rubripes
ENSSFOG00015020384	-	100	60.086	ENSTRUG00000010089	rbm24a	100	60.086	Takifugu_rubripes
ENSSFOG00015020384	-	98	59.908	ENSTNIG00000012600	-	99	57.143	Tetraodon_nigroviridis
ENSSFOG00015020384	-	99	61.161	ENSTNIG00000018417	rbm24b	100	60.924	Tetraodon_nigroviridis
ENSSFOG00015020384	-	100	66.197	ENSTNIG00000009181	rbm24a	100	63.208	Tetraodon_nigroviridis
ENSSFOG00015020384	-	73	71.613	ENSTTRG00000000393	RBM24	100	60.924	Tursiops_truncatus
ENSSFOG00015020384	-	54	76.577	ENSVVUG00000003364	-	99	71.901	Vulpes_vulpes
ENSSFOG00015020384	-	100	62.555	ENSXETG00000024618	rbm24	99	63.436	Xenopus_tropicalis
ENSSFOG00015020384	-	85	64.921	ENSXCOG00000020100	rbm24a	100	59.149	Xiphophorus_couchianus
ENSSFOG00015020384	-	99	52.193	ENSXCOG00000019779	rbm24b	100	58.964	Xiphophorus_couchianus
ENSSFOG00015020384	-	85	64.921	ENSXMAG00000029809	rbm24a	100	59.149	Xiphophorus_maculatus
ENSSFOG00015020384	-	93	57.787	ENSXMAG00000014017	rbm24b	100	58.964	Xiphophorus_maculatus
ENSSFOG00015020384	-	97	69.298	ENSXMAG00000028579	-	100	68.254	Xiphophorus_maculatus