EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020392 (Gene tree)
Gene ID: 108941701
Gene Symbol: lsm12a
Alias: zgc:85812
Full Name: protein LSM12 homolog A-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 5558 bases
Position: chrKV411220.1:218181-223738
Accession: 108941701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015031827	AD	PF09793.9	2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032184	-	1970	XM_018764489	ENSSFOP00015031827	196 (aa)	XP_018620005	A0A1W5B385

Gene Model

Click here to download ENSSFOG00015020392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020392	lsm12a	100	91.837	ENSSFOG00015009612	lsm12	100	91.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020392	lsm12a	100	83.163	ENSG00000161654	LSM12	100	83.163	Homo_sapiens
ENSSFOG00015020392	lsm12a	100	94.898	ENSAPOG00000007907	lsm12b	100	94.898	Acanthochromis_polyacanthus
ENSSFOG00015020392	lsm12a	100	81.407	ENSAMEG00000018321	LSM12	100	81.407	Ailuropoda_melanoleuca
ENSSFOG00015020392	lsm12a	100	92.347	ENSACIG00000008538	lsm12b	100	92.347	Amphilophus_citrinellus
ENSSFOG00015020392	lsm12a	100	94.388	ENSAOCG00000021847	lsm12b	88	94.388	Amphiprion_ocellaris
ENSSFOG00015020392	lsm12a	100	94.388	ENSAPEG00000002252	lsm12b	100	94.388	Amphiprion_percula
ENSSFOG00015020392	lsm12a	100	93.367	ENSATEG00000005705	lsm12b	100	93.367	Anabas_testudineus
ENSSFOG00015020392	lsm12a	100	81.122	ENSACAG00000004618	LSM12	100	81.122	Anolis_carolinensis
ENSSFOG00015020392	lsm12a	100	83.163	ENSANAG00000029011	LSM12	100	83.163	Aotus_nancymaae
ENSSFOG00015020392	lsm12a	100	92.857	ENSACLG00000026332	lsm12b	100	92.857	Astatotilapia_calliptera
ENSSFOG00015020392	lsm12a	100	86.735	ENSAMXG00000036117	lsm12a	91	86.735	Astyanax_mexicanus
ENSSFOG00015020392	lsm12a	100	92.347	ENSAMXG00000032952	lsm12b	100	92.347	Astyanax_mexicanus
ENSSFOG00015020392	lsm12a	100	83.163	ENSBTAG00000016252	LSM12	100	83.163	Bos_taurus
ENSSFOG00015020392	lsm12a	100	83.163	ENSCJAG00000048480	LSM12	100	83.163	Callithrix_jacchus
ENSSFOG00015020392	lsm12a	100	83.163	ENSCAFG00000014379	LSM12	92	83.163	Canis_familiaris
ENSSFOG00015020392	lsm12a	100	83.163	ENSCAFG00020012173	LSM12	100	83.163	Canis_lupus_dingo
ENSSFOG00015020392	lsm12a	100	83.163	ENSCHIG00000018175	LSM12	100	83.163	Capra_hircus
ENSSFOG00015020392	lsm12a	100	83.163	ENSTSYG00000036361	LSM12	100	83.163	Carlito_syrichta
ENSSFOG00015020392	lsm12a	83	80.247	ENSCAPG00000009647	LSM12	89	80.247	Cavia_aperea
ENSSFOG00015020392	lsm12a	100	83.163	ENSCPOG00000012860	LSM12	100	83.163	Cavia_porcellus
ENSSFOG00015020392	lsm12a	100	83.163	ENSCCAG00000032905	LSM12	100	83.163	Cebus_capucinus
ENSSFOG00015020392	lsm12a	100	83.163	ENSCATG00000030577	-	100	83.163	Cercocebus_atys
ENSSFOG00015020392	lsm12a	100	83.673	ENSCLAG00000015759	LSM12	100	83.673	Chinchilla_lanigera
ENSSFOG00015020392	lsm12a	100	83.673	ENSCSAG00000003486	LSM12	100	83.673	Chlorocebus_sabaeus
ENSSFOG00015020392	lsm12a	56	84.404	ENSCHOG00000001198	LSM12	100	84.404	Choloepus_hoffmanni
ENSSFOG00015020392	lsm12a	100	83.163	ENSCPBG00000027105	LSM12	100	83.163	Chrysemys_picta_bellii
ENSSFOG00015020392	lsm12a	100	83.163	ENSCANG00000043328	LSM12	100	83.163	Colobus_angolensis_palliatus
ENSSFOG00015020392	lsm12a	100	83.163	ENSCGRG00001002094	Lsm12	100	83.163	Cricetulus_griseus_chok1gshd
ENSSFOG00015020392	lsm12a	89	75.287	ENSCGRG00000004316	Lsm12	98	75.287	Cricetulus_griseus_crigri
ENSSFOG00015020392	lsm12a	100	94.388	ENSCSEG00000008434	lsm12b	100	94.388	Cynoglossus_semilaevis
ENSSFOG00015020392	lsm12a	100	93.367	ENSCVAG00000008755	lsm12b	100	93.367	Cyprinodon_variegatus
ENSSFOG00015020392	lsm12a	100	88.265	ENSDARG00000028848	lsm12a	100	88.265	Danio_rerio
ENSSFOG00015020392	lsm12a	100	91.837	ENSDARG00000109510	lsm12b	100	91.837	Danio_rerio
ENSSFOG00015020392	lsm12a	100	83.163	ENSDNOG00000002418	LSM12	91	83.163	Dasypus_novemcinctus
ENSSFOG00015020392	lsm12a	100	83.163	ENSDORG00000016381	Lsm12	100	83.163	Dipodomys_ordii
ENSSFOG00015020392	lsm12a	83	35.542	FBgn0030364	Lsm12	76	35.542	Drosophila_melanogaster
ENSSFOG00015020392	lsm12a	88	74.566	ENSETEG00000011012	-	99	74.566	Echinops_telfairi
ENSSFOG00015020392	lsm12a	100	82.653	ENSETEG00000008374	LSM12	100	82.653	Echinops_telfairi
ENSSFOG00015020392	lsm12a	85	66.467	ENSEBUG00000016299	lsm12a	92	66.467	Eptatretus_burgeri
ENSSFOG00015020392	lsm12a	100	83.163	ENSEASG00005010155	LSM12	100	83.163	Equus_asinus_asinus
ENSSFOG00015020392	lsm12a	100	83.163	ENSECAG00000009071	LSM12	100	83.163	Equus_caballus
ENSSFOG00015020392	lsm12a	78	83.007	ENSEEUG00000002419	-	100	83.007	Erinaceus_europaeus
ENSSFOG00015020392	lsm12a	100	91.327	ENSELUG00000000256	-	100	91.327	Esox_lucius
ENSSFOG00015020392	lsm12a	100	92.857	ENSELUG00000015538	lsm12b	100	88.265	Esox_lucius
ENSSFOG00015020392	lsm12a	100	83.163	ENSFCAG00000037021	LSM12	100	83.163	Felis_catus
ENSSFOG00015020392	lsm12a	76	83.784	ENSFDAG00000008954	LSM12	87	83.784	Fukomys_damarensis
ENSSFOG00015020392	lsm12a	100	93.367	ENSFHEG00000019913	lsm12b	100	93.367	Fundulus_heteroclitus
ENSSFOG00015020392	lsm12a	81	93.671	ENSGMOG00000015449	lsm12b	100	93.671	Gadus_morhua
ENSSFOG00015020392	lsm12a	78	82.353	ENSGALG00000039803	LSM12	100	82.353	Gallus_gallus
ENSSFOG00015020392	lsm12a	100	92.857	ENSGAFG00000011829	lsm12b	100	92.857	Gambusia_affinis
ENSSFOG00015020392	lsm12a	81	93.038	ENSGACG00000003428	lsm12b	100	93.038	Gasterosteus_aculeatus
ENSSFOG00015020392	lsm12a	100	82.143	ENSGAGG00000021965	LSM12	100	82.143	Gopherus_agassizii
ENSSFOG00015020392	lsm12a	100	83.163	ENSGGOG00000010589	-	100	83.163	Gorilla_gorilla
ENSSFOG00015020392	lsm12a	85	92.814	ENSHBUG00000007667	lsm12b	74	92.814	Haplochromis_burtoni
ENSSFOG00015020392	lsm12a	100	83.163	ENSHGLG00000011411	LSM12	100	83.163	Heterocephalus_glaber_female
ENSSFOG00015020392	lsm12a	79	82.468	ENSHGLG00100000241	LSM12	82	82.468	Heterocephalus_glaber_male
ENSSFOG00015020392	lsm12a	100	94.388	ENSHCOG00000002094	lsm12b	100	94.388	Hippocampus_comes
ENSSFOG00015020392	lsm12a	100	90.816	ENSIPUG00000014800	lsm12	100	90.816	Ictalurus_punctatus
ENSSFOG00015020392	lsm12a	99	82.990	ENSIPUG00000008936	lsm12a	99	82.990	Ictalurus_punctatus
ENSSFOG00015020392	lsm12a	100	83.163	ENSSTOG00000007403	LSM12	100	83.163	Ictidomys_tridecemlineatus
ENSSFOG00015020392	lsm12a	96	73.684	ENSJJAG00000011793	-	100	73.684	Jaculus_jaculus
ENSSFOG00015020392	lsm12a	100	82.143	ENSJJAG00000004364	-	100	82.883	Jaculus_jaculus
ENSSFOG00015020392	lsm12a	80	72.327	ENSJJAG00000014652	-	95	72.327	Jaculus_jaculus
ENSSFOG00015020392	lsm12a	89	90.341	ENSKMAG00000007704	lsm12b	59	90.341	Kryptolebias_marmoratus
ENSSFOG00015020392	lsm12a	100	94.898	ENSLBEG00000027999	lsm12b	100	94.898	Labrus_bergylta
ENSSFOG00015020392	lsm12a	100	86.224	ENSLACG00000015981	LSM12	100	86.224	Latimeria_chalumnae
ENSSFOG00015020392	lsm12a	100	89.796	ENSLOCG00000013079	lsm12b	99	89.796	Lepisosteus_oculatus
ENSSFOG00015020392	lsm12a	100	83.163	ENSLAFG00000005202	LSM12	100	83.163	Loxodonta_africana
ENSSFOG00015020392	lsm12a	100	83.163	ENSMFAG00000031376	LSM12	100	83.163	Macaca_fascicularis
ENSSFOG00015020392	lsm12a	100	83.163	ENSMMUG00000006804	LSM12	100	83.163	Macaca_mulatta
ENSSFOG00015020392	lsm12a	65	71.264	ENSMMUG00000042106	-	100	71.264	Macaca_mulatta
ENSSFOG00015020392	lsm12a	100	83.163	ENSMNEG00000030594	-	100	83.163	Macaca_nemestrina
ENSSFOG00015020392	lsm12a	100	83.163	ENSMLEG00000039934	LSM12	100	83.163	Mandrillus_leucophaeus
ENSSFOG00015020392	lsm12a	100	94.898	ENSMAMG00000004279	lsm12b	100	94.898	Mastacembelus_armatus
ENSSFOG00015020392	lsm12a	100	92.857	ENSMZEG00005005754	lsm12b	100	92.857	Maylandia_zebra
ENSSFOG00015020392	lsm12a	100	83.673	ENSMICG00000037219	LSM12	100	83.673	Microcebus_murinus
ENSSFOG00015020392	lsm12a	100	72.449	ENSMOCG00000017015	-	86	72.449	Microtus_ochrogaster
ENSSFOG00015020392	lsm12a	100	83.163	ENSMOCG00000019878	-	100	83.163	Microtus_ochrogaster
ENSSFOG00015020392	lsm12a	100	94.388	ENSMMOG00000020848	lsm12b	100	94.388	Mola_mola
ENSSFOG00015020392	lsm12a	100	93.878	ENSMALG00000007578	lsm12b	100	93.878	Monopterus_albus
ENSSFOG00015020392	lsm12a	100	83.163	MGP_CAROLIEiJ_G0017241	Lsm12	100	83.163	Mus_caroli
ENSSFOG00015020392	lsm12a	100	83.163	ENSMUSG00000020922	Lsm12	100	83.163	Mus_musculus
ENSSFOG00015020392	lsm12a	100	76.526	MGP_PahariEiJ_G0018371	Lsm12	100	76.526	Mus_pahari
ENSSFOG00015020392	lsm12a	100	82.653	MGP_SPRETEiJ_G0018084	Lsm12	100	82.653	Mus_spretus
ENSSFOG00015020392	lsm12a	100	83.673	ENSMLUG00000006391	LSM12	100	83.673	Myotis_lucifugus
ENSSFOG00015020392	lsm12a	100	83.163	ENSNGAG00000001870	Lsm12	100	83.163	Nannospalax_galili
ENSSFOG00015020392	lsm12a	100	58.128	ENSNGAG00000015429	-	100	58.128	Nannospalax_galili
ENSSFOG00015020392	lsm12a	100	92.857	ENSNBRG00000006266	lsm12b	100	92.857	Neolamprologus_brichardi
ENSSFOG00015020392	lsm12a	100	83.163	ENSNLEG00000005580	-	100	83.163	Nomascus_leucogenys
ENSSFOG00015020392	lsm12a	85	83.735	ENSMEUG00000007501	-	100	83.735	Notamacropus_eugenii
ENSSFOG00015020392	lsm12a	100	83.163	ENSOPRG00000008552	LSM12	100	83.163	Ochotona_princeps
ENSSFOG00015020392	lsm12a	100	76.531	ENSODEG00000007886	-	74	76.531	Octodon_degus
ENSSFOG00015020392	lsm12a	99	82.990	ENSODEG00000017998	-	99	82.990	Octodon_degus
ENSSFOG00015020392	lsm12a	100	92.857	ENSONIG00000007933	lsm12b	100	92.857	Oreochromis_niloticus
ENSSFOG00015020392	lsm12a	99	78.974	ENSOCUG00000021254	-	100	78.974	Oryctolagus_cuniculus
ENSSFOG00015020392	lsm12a	99	78.462	ENSOCUG00000027889	-	100	78.462	Oryctolagus_cuniculus
ENSSFOG00015020392	lsm12a	100	81.407	ENSOCUG00000008566	-	100	81.407	Oryctolagus_cuniculus
ENSSFOG00015020392	lsm12a	99	78.974	ENSOCUG00000024823	-	100	78.974	Oryctolagus_cuniculus
ENSSFOG00015020392	lsm12a	100	94.388	ENSORLG00000011310	lsm12b	100	94.388	Oryzias_latipes
ENSSFOG00015020392	lsm12a	100	94.388	ENSORLG00020002060	lsm12b	92	94.388	Oryzias_latipes_hni
ENSSFOG00015020392	lsm12a	100	94.388	ENSORLG00015001647	lsm12b	92	94.388	Oryzias_latipes_hsok
ENSSFOG00015020392	lsm12a	100	94.388	ENSOMEG00000006184	lsm12b	92	94.388	Oryzias_melastigma
ENSSFOG00015020392	lsm12a	100	83.673	ENSOGAG00000010489	LSM12	100	83.673	Otolemur_garnettii
ENSSFOG00015020392	lsm12a	100	80.198	ENSOARG00000006589	LSM12	100	80.198	Ovis_aries
ENSSFOG00015020392	lsm12a	100	73.469	ENSPPAG00000034974	-	100	73.469	Pan_paniscus
ENSSFOG00015020392	lsm12a	100	83.163	ENSPPRG00000023420	LSM12	100	83.163	Panthera_pardus
ENSSFOG00015020392	lsm12a	73	81.982	ENSPTIG00000014850	-	100	81.982	Panthera_tigris_altaica
ENSSFOG00015020392	lsm12a	78	83.007	ENSPTIG00000012704	-	82	83.007	Panthera_tigris_altaica
ENSSFOG00015020392	lsm12a	100	83.163	ENSPTRG00000009261	LSM12	100	83.163	Pan_troglodytes
ENSSFOG00015020392	lsm12a	100	83.163	ENSPANG00000021315	-	100	83.163	Papio_anubis
ENSSFOG00015020392	lsm12a	100	86.224	ENSPKIG00000017932	-	100	86.224	Paramormyrops_kingsleyae
ENSSFOG00015020392	lsm12a	100	92.347	ENSPKIG00000021058	lsm12b	100	92.347	Paramormyrops_kingsleyae
ENSSFOG00015020392	lsm12a	100	93.367	ENSPMGG00000021344	lsm12b	100	93.367	Periophthalmus_magnuspinnatus
ENSSFOG00015020392	lsm12a	100	83.163	ENSPEMG00000012199	Lsm12	100	83.163	Peromyscus_maniculatus_bairdii
ENSSFOG00015020392	lsm12a	89	66.286	ENSPMAG00000005461	lsm12a	99	66.286	Petromyzon_marinus
ENSSFOG00015020392	lsm12a	100	83.163	ENSPCIG00000020244	LSM12	100	83.163	Phascolarctos_cinereus
ENSSFOG00015020392	lsm12a	100	92.347	ENSPFOG00000015930	lsm12b	100	92.347	Poecilia_formosa
ENSSFOG00015020392	lsm12a	100	92.347	ENSPLAG00000021089	lsm12b	100	92.347	Poecilia_latipinna
ENSSFOG00015020392	lsm12a	100	92.347	ENSPMEG00000012961	lsm12b	100	92.347	Poecilia_mexicana
ENSSFOG00015020392	lsm12a	87	92.982	ENSPREG00000010236	lsm12b	95	92.982	Poecilia_reticulata
ENSSFOG00015020392	lsm12a	100	83.163	ENSPPYG00000008344	LSM12	100	83.163	Pongo_abelii
ENSSFOG00015020392	lsm12a	81	84.277	ENSPCAG00000008790	LSM12	100	84.277	Procavia_capensis
ENSSFOG00015020392	lsm12a	100	83.163	ENSPCOG00000027951	LSM12	100	83.163	Propithecus_coquereli
ENSSFOG00015020392	lsm12a	100	82.653	ENSPVAG00000013706	LSM12	100	82.653	Pteropus_vampyrus
ENSSFOG00015020392	lsm12a	100	92.857	ENSPNYG00000003386	lsm12b	100	92.857	Pundamilia_nyererei
ENSSFOG00015020392	lsm12a	100	86.224	ENSPNAG00000018435	lsm12a	100	86.224	Pygocentrus_nattereri
ENSSFOG00015020392	lsm12a	100	89.286	ENSPNAG00000004186	lsm12b	100	89.286	Pygocentrus_nattereri
ENSSFOG00015020392	lsm12a	100	83.163	ENSRNOG00000020894	Lsm12	100	83.163	Rattus_norvegicus
ENSSFOG00015020392	lsm12a	100	83.163	ENSRBIG00000027910	LSM12	100	83.163	Rhinopithecus_bieti
ENSSFOG00015020392	lsm12a	99	51.031	ENSRROG00000000537	-	99	51.031	Rhinopithecus_roxellana
ENSSFOG00015020392	lsm12a	100	83.163	ENSRROG00000045530	-	100	83.163	Rhinopithecus_roxellana
ENSSFOG00015020392	lsm12a	100	83.163	ENSSBOG00000025310	LSM12	100	83.163	Saimiri_boliviensis_boliviensis
ENSSFOG00015020392	lsm12a	81	81.646	ENSSHAG00000014914	LSM12	100	81.646	Sarcophilus_harrisii
ENSSFOG00015020392	lsm12a	100	93.878	ENSSMAG00000008089	lsm12b	100	93.878	Scophthalmus_maximus
ENSSFOG00015020392	lsm12a	100	93.878	ENSSDUG00000012711	lsm12b	100	93.878	Seriola_dumerili
ENSSFOG00015020392	lsm12a	100	93.878	ENSSLDG00000007404	lsm12b	100	93.878	Seriola_lalandi_dorsalis
ENSSFOG00015020392	lsm12a	78	82.353	ENSSARG00000005537	LSM12	100	82.353	Sorex_araneus
ENSSFOG00015020392	lsm12a	100	82.653	ENSSPUG00000011984	LSM12	100	82.653	Sphenodon_punctatus
ENSSFOG00015020392	lsm12a	100	94.388	ENSSPAG00000017058	lsm12b	100	94.388	Stegastes_partitus
ENSSFOG00015020392	lsm12a	100	83.163	ENSSSCG00000032394	LSM12	100	83.163	Sus_scrofa
ENSSFOG00015020392	lsm12a	100	92.857	ENSTRUG00000007121	lsm12b	100	92.857	Takifugu_rubripes
ENSSFOG00015020392	lsm12a	100	93.878	ENSTNIG00000014436	lsm12b	100	93.878	Tetraodon_nigroviridis
ENSSFOG00015020392	lsm12a	100	82.653	ENSTBEG00000012523	-	100	82.653	Tupaia_belangeri
ENSSFOG00015020392	lsm12a	100	80.612	ENSTBEG00000012392	-	100	80.612	Tupaia_belangeri
ENSSFOG00015020392	lsm12a	100	83.163	ENSTTRG00000010433	LSM12	100	83.163	Tursiops_truncatus
ENSSFOG00015020392	lsm12a	100	83.163	ENSUAMG00000006313	LSM12	100	83.163	Ursus_americanus
ENSSFOG00015020392	lsm12a	81	80.380	ENSUMAG00000012987	LSM12	90	80.380	Ursus_maritimus
ENSSFOG00015020392	lsm12a	100	78.571	ENSVPAG00000011145	LSM12	100	78.571	Vicugna_pacos
ENSSFOG00015020392	lsm12a	100	83.163	ENSVVUG00000017581	LSM12	100	83.163	Vulpes_vulpes
ENSSFOG00015020392	lsm12a	82	59.375	ENSXETG00000003371	lsm12	77	59.375	Xenopus_tropicalis
ENSSFOG00015020392	lsm12a	100	92.857	ENSXCOG00000003994	lsm12b	100	92.857	Xiphophorus_couchianus
ENSSFOG00015020392	lsm12a	100	92.857	ENSXMAG00000020950	lsm12b	100	92.857	Xiphophorus_maculatus