EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSFOG00015020478 (Gene tree)
Gene ID
108922795
Gene Symbol
prdm5
Alias
un-named hi61|unm hi61
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
44247 bases
Position
chrKV410819.1:1159384-1203630
Accession
108922795
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59111
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59211
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59311
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59411
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59511
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59611
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59711
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59811
ENSSFOP00015032001zf-C2H2PF00096.262.7e-59911
ENSSFOP00015032001zf-C2H2PF00096.262.7e-591011
ENSSFOP00015032001zf-C2H2PF00096.262.7e-591111
ENSSFOP00015032001zf-metPF12874.76.3e-2412
ENSSFOP00015032001zf-metPF12874.76.3e-2422
ENSSFOP00015032001zf-C2H2_jazPF12171.88e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015032358-1806XM_018733148ENSSFOP00015032001601 (aa)XP_018588664-
Gene Model
Click here to download ENSSFOG00015020478's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020478's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSFOG00015020478prdm57642.623ENSSFOG00015011225-6042.623
ENSSFOG00015020478prdm56036.364ENSSFOG00015008114-5236.364
ENSSFOG00015020478prdm55436.364ENSSFOG00015021578snai1a5636.364
ENSSFOG00015020478prdm57039.516ENSSFOG00015023669-8839.516
ENSSFOG00015020478prdm57437.963ENSSFOG00015012207-7937.963
ENSSFOG00015020478prdm55542.308ENSSFOG00015021176-5442.308
ENSSFOG00015020478prdm57438.095ENSSFOG00015006083-6238.095
ENSSFOG00015020478prdm56130.233ENSSFOG00015008241hinfp5430.233
ENSSFOG00015020478prdm57337.500ENSSFOG00015009678-5937.987
ENSSFOG00015020478prdm56037.126ENSSFOG00015021699si:ch211-166g5.46837.126
ENSSFOG00015020478prdm57132.456ENSSFOG00015014778znf5265332.659
ENSSFOG00015020478prdm56034.951ENSSFOG00015015427znf3665834.951
ENSSFOG00015020478prdm58542.532ENSSFOG00015000652ZNF7758941.873
ENSSFOG00015020478prdm57637.557ENSSFOG00015015958-6038.806
ENSSFOG00015020478prdm57639.326ENSSFOG00015010829-7439.326
ENSSFOG00015020478prdm56339.130ENSSFOG00015021291e4f16939.130
ENSSFOG00015020478prdm55940.876ENSSFOG00015018025SNAI25640.876
ENSSFOG00015020478prdm58341.518ENSSFOG00015013448-8241.518
ENSSFOG00015020478prdm57535.092ENSSFOG00015021831-7735.092
ENSSFOG00015020478prdm57439.464ENSSFOG00015015878-9239.464
ENSSFOG00015020478prdm57943.605ENSSFOG00015008577-9941.317
ENSSFOG00015020478prdm56032.558ENSSFOG00015012089ZNF3198832.558
ENSSFOG00015020478prdm57535.493ENSSFOG00015006108-5735.493
ENSSFOG00015020478prdm57436.338ENSSFOG00015003121znf6689036.257
ENSSFOG00015020478prdm57541.071ENSSFOG00015015384-8541.071
ENSSFOG00015020478prdm57441.121ENSSFOG00015008994znf2366741.121
ENSSFOG00015020478prdm55232.787ENSSFOG00015019679-8832.787
ENSSFOG00015020478prdm55038.926ENSSFOG00015013893si:ch211-154o6.25139.073
ENSSFOG00015020478prdm57439.252ENSSFOG00015010128ZNF5219539.252
ENSSFOG00015020478prdm57436.667ENSSFOG00015023295znf6528436.667
ENSSFOG00015020478prdm58137.303ENSSFOG00015019818-7337.805
ENSSFOG00015020478prdm57437.931ENSSFOG00015020993-7737.931
ENSSFOG00015020478prdm56332.765ENSSFOG00015014678znf3415332.765
ENSSFOG00015020478prdm56137.500ENSSFOG00015001195SCRT15737.500
ENSSFOG00015020478prdm55746.667ENSSFOG00015011531-8642.683
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015020478prdm510075.285ENSG00000138738PRDM510075.772Homo_sapiens
ENSSFOG00015020478prdm510085.927ENSAPOG00000023220prdm510085.927Acanthochromis_polyacanthus
ENSSFOG00015020478prdm59169.459ENSAMEG00000003050PRDM510069.284Ailuropoda_melanoleuca
ENSSFOG00015020478prdm510084.768ENSACIG00000000406prdm510084.768Amphilophus_citrinellus
ENSSFOG00015020478prdm510086.139ENSAOCG00000014806prdm510086.139Amphiprion_ocellaris
ENSSFOG00015020478prdm510076.396ENSAPEG00000016846prdm510077.671Amphiprion_percula
ENSSFOG00015020478prdm510086.755ENSATEG00000013829prdm510086.755Anabas_testudineus
ENSSFOG00015020478prdm59579.270ENSAPLG00000013828PRDM510079.934Anas_platyrhynchos
ENSSFOG00015020478prdm510075.753ENSACAG00000012999PRDM510075.911Anolis_carolinensis
ENSSFOG00015020478prdm510090.000ENSANAG00000027411PRDM510090.000Aotus_nancymaae
ENSSFOG00015020478prdm510086.589ENSACLG00000017996prdm510086.589Astatotilapia_calliptera
ENSSFOG00015020478prdm58483.902ENSAMXG00000041864prdm59983.902Astyanax_mexicanus
ENSSFOG00015020478prdm510075.436ENSBTAG00000012111PRDM510074.960Bos_taurus
ENSSFOG00015020478prdm510089.333ENSCJAG00000003133PRDM510089.333Callithrix_jacchus
ENSSFOG00015020478prdm59266.609ENSCAFG00000004179PRDM510066.609Canis_familiaris
ENSSFOG00015020478prdm510075.772ENSCAFG00020017685PRDM510075.772Canis_lupus_dingo
ENSSFOG00015020478prdm510076.375ENSCHIG00000018772PRDM510076.375Capra_hircus
ENSSFOG00015020478prdm59574.340ENSTSYG00000009630PRDM59573.443Carlito_syrichta
ENSSFOG00015020478prdm59089.333ENSCAPG00000015217PRDM510089.333Cavia_aperea
ENSSFOG00015020478prdm59587.658ENSCPOG00000012883PRDM510089.333Cavia_porcellus
ENSSFOG00015020478prdm510090.000ENSCCAG00000023157PRDM510090.000Cebus_capucinus
ENSSFOG00015020478prdm510090.000ENSCATG00000042510PRDM510090.000Cercocebus_atys
ENSSFOG00015020478prdm59587.342ENSCLAG00000005392PRDM510089.333Chinchilla_lanigera
ENSSFOG00015020478prdm510075.447ENSCSAG00000003729PRDM510075.935Chlorocebus_sabaeus
ENSSFOG00015020478prdm59978.322ENSCHOG00000007801PRDM58978.322Choloepus_hoffmanni
ENSSFOG00015020478prdm510079.219ENSCPBG00000024735PRDM510080.000Chrysemys_picta_bellii
ENSSFOG00015020478prdm510090.000ENSCANG00000036807PRDM510090.000Colobus_angolensis_palliatus
ENSSFOG00015020478prdm59989.333ENSCGRG00001010581Prdm510089.333Cricetulus_griseus_chok1gshd
ENSSFOG00015020478prdm59568.205ENSCGRG00000010996-9968.205Cricetulus_griseus_crigri
ENSSFOG00015020478prdm510084.704ENSCSEG00000019979prdm510084.704Cynoglossus_semilaevis
ENSSFOG00015020478prdm510081.129ENSCVAG00000013692prdm510081.129Cyprinodon_variegatus
ENSSFOG00015020478prdm59982.567ENSDARG00000006288prdm59982.567Danio_rerio
ENSSFOG00015020478prdm59172.917ENSDNOG00000002009PRDM510073.090Dasypus_novemcinctus
ENSSFOG00015020478prdm510087.025ENSDORG00000007739Prdm510087.025Dipodomys_ordii
ENSSFOG00015020478prdm58177.143ENSETEG00000020268PRDM58579.381Echinops_telfairi
ENSSFOG00015020478prdm59971.829ENSEBUG00000004301prdm510071.829Eptatretus_burgeri
ENSSFOG00015020478prdm510090.667ENSEASG00005018365PRDM510090.667Equus_asinus_asinus
ENSSFOG00015020478prdm510066.049ENSECAG00000024747-10076.324Equus_caballus
ENSSFOG00015020478prdm59972.968ENSECAG00000011516PRDM59072.110Equus_caballus
ENSSFOG00015020478prdm59970.364ENSEEUG00000010306PRDM510070.884Erinaceus_europaeus
ENSSFOG00015020478prdm59982.625ENSELUG00000005894prdm59382.625Esox_lucius
ENSSFOG00015020478prdm510075.447ENSFCAG00000025656PRDM510075.447Felis_catus
ENSSFOG00015020478prdm59564.286ENSFALG00000008381PRDM510065.528Ficedula_albicollis
ENSSFOG00015020478prdm510089.333ENSFDAG00000021361PRDM510089.333Fukomys_damarensis
ENSSFOG00015020478prdm59987.209ENSFHEG00000013040prdm59987.209Fundulus_heteroclitus
ENSSFOG00015020478prdm59965.605ENSGMOG00000012038prdm59976.821Gadus_morhua
ENSSFOG00015020478prdm510079.811ENSGALG00000011963PRDM510080.284Gallus_gallus
ENSSFOG00015020478prdm510081.983ENSGAFG00000019233prdm510081.983Gambusia_affinis
ENSSFOG00015020478prdm59974.761ENSGAGG00000020362PRDM59975.717Gopherus_agassizii
ENSSFOG00015020478prdm510090.000ENSGGOG00000013562PRDM510090.000Gorilla_gorilla
ENSSFOG00015020478prdm510086.855ENSHBUG00000023375prdm510086.689Haplochromis_burtoni
ENSSFOG00015020478prdm510074.367ENSHGLG00000003010PRDM510079.430Heterocephalus_glaber_female
ENSSFOG00015020478prdm510089.333ENSHGLG00100003696PRDM510089.333Heterocephalus_glaber_male
ENSSFOG00015020478prdm59985.185ENSHCOG00000012131prdm59985.185Hippocampus_comes
ENSSFOG00015020478prdm510085.761ENSIPUG00000001248prdm510085.925Ictalurus_punctatus
ENSSFOG00015020478prdm59585.759ENSSTOG00000004741PRDM510088.000Ictidomys_tridecemlineatus
ENSSFOG00015020478prdm59587.342ENSJJAG00000011464Prdm510088.667Jaculus_jaculus
ENSSFOG00015020478prdm510084.779ENSKMAG00000013663prdm510085.809Kryptolebias_marmoratus
ENSSFOG00015020478prdm510085.185ENSLBEG00000022736prdm510085.185Labrus_bergylta
ENSSFOG00015020478prdm59179.896ENSLACG00000009187PRDM59981.043Latimeria_chalumnae
ENSSFOG00015020478prdm59984.000ENSLOCG00000009778prdm59985.191Lepisosteus_oculatus
ENSSFOG00015020478prdm510075.447ENSLAFG00000006532PRDM59982.595Loxodonta_africana
ENSSFOG00015020478prdm510090.000ENSMFAG00000045845PRDM510090.000Macaca_fascicularis
ENSSFOG00015020478prdm510090.000ENSMMUG00000003249PRDM510090.000Macaca_mulatta
ENSSFOG00015020478prdm510090.000ENSMNEG00000019018PRDM510090.000Macaca_nemestrina
ENSSFOG00015020478prdm59971.815ENSMLEG00000023145PRDM510074.829Mandrillus_leucophaeus
ENSSFOG00015020478prdm510086.230ENSMAMG00000013419prdm510086.297Mastacembelus_armatus
ENSSFOG00015020478prdm510086.855ENSMZEG00005020645prdm510086.689Maylandia_zebra
ENSSFOG00015020478prdm59579.104ENSMGAG00000010710PRDM510079.602Meleagris_gallopavo
ENSSFOG00015020478prdm59989.333ENSMAUG00000006768Prdm510089.333Mesocricetus_auratus
ENSSFOG00015020478prdm510089.333ENSMICG00000001459PRDM510089.333Microcebus_murinus
ENSSFOG00015020478prdm59989.333ENSMOCG00000016267Prdm510089.333Microtus_ochrogaster
ENSSFOG00015020478prdm510084.666ENSMMOG00000006035prdm510086.304Mola_mola
ENSSFOG00015020478prdm510075.671ENSMODG00000018942PRDM510076.619Monodelphis_domestica
ENSSFOG00015020478prdm510084.526ENSMALG00000013934prdm510084.526Monopterus_albus
ENSSFOG00015020478prdm59988.667MGP_CAROLIEiJ_G0028463Prdm510088.667Mus_caroli
ENSSFOG00015020478prdm59988.667ENSMUSG00000029913Prdm510088.667Mus_musculus
ENSSFOG00015020478prdm59988.667MGP_PahariEiJ_G0022203Prdm510088.667Mus_pahari
ENSSFOG00015020478prdm59988.667MGP_SPRETEiJ_G0029467Prdm510088.667Mus_spretus
ENSSFOG00015020478prdm510074.802ENSMPUG00000017415PRDM510074.960Mustela_putorius_furo
ENSSFOG00015020478prdm59168.205ENSMLUG00000006097PRDM510068.205Myotis_lucifugus
ENSSFOG00015020478prdm59988.667ENSNGAG00000018317Prdm510088.667Nannospalax_galili
ENSSFOG00015020478prdm510076.998ENSNBRG00000004976prdm510082.343Neolamprologus_brichardi
ENSSFOG00015020478prdm510090.000ENSNLEG00000009107PRDM510090.000Nomascus_leucogenys
ENSSFOG00015020478prdm58583.051ENSMEUG00000006576-7183.051Notamacropus_eugenii
ENSSFOG00015020478prdm58181.369ENSOPRG00000011066-7181.132Ochotona_princeps
ENSSFOG00015020478prdm59989.333ENSODEG00000009133PRDM510089.333Octodon_degus
ENSSFOG00015020478prdm510084.076ENSONIG00000003111prdm59984.236Oreochromis_niloticus
ENSSFOG00015020478prdm59975.050ENSOANG00000015109PRDM59774.851Ornithorhynchus_anatinus
ENSSFOG00015020478prdm55696.667ENSOANG00000006197-10096.667Ornithorhynchus_anatinus
ENSSFOG00015020478prdm59366.837ENSOCUG00000013454PRDM510068.027Oryctolagus_cuniculus
ENSSFOG00015020478prdm510086.424ENSORLG00000016247prdm510086.424Oryzias_latipes
ENSSFOG00015020478prdm510086.711ENSORLG00020018051prdm510086.711Oryzias_latipes_hni
ENSSFOG00015020478prdm510086.424ENSORLG00015013760prdm510086.424Oryzias_latipes_hsok
ENSSFOG00015020478prdm510086.446ENSOMEG00000005143prdm510086.446Oryzias_melastigma
ENSSFOG00015020478prdm58464.662ENSOGAG00000009996PRDM59866.978Otolemur_garnettii
ENSSFOG00015020478prdm59574.674ENSOARG00000015473PRDM510070.306Ovis_aries
ENSSFOG00015020478prdm59971.338ENSPPAG00000043045PRDM510074.340Pan_paniscus
ENSSFOG00015020478prdm510074.959ENSPPRG00000001020PRDM510074.959Panthera_pardus
ENSSFOG00015020478prdm59575.000ENSPTIG00000010807PRDM59575.000Panthera_tigris_altaica
ENSSFOG00015020478prdm510090.000ENSPTRG00000016403PRDM510090.000Pan_troglodytes
ENSSFOG00015020478prdm510090.000ENSPANG00000023612PRDM510090.000Papio_anubis
ENSSFOG00015020478prdm510054.952ENSPKIG00000015492prdm510066.283Paramormyrops_kingsleyae
ENSSFOG00015020478prdm510079.968ENSPSIG00000013505PRDM510080.599Pelodiscus_sinensis
ENSSFOG00015020478prdm510083.306ENSPMGG00000012622prdm510083.306Periophthalmus_magnuspinnatus
ENSSFOG00015020478prdm57468.841ENSPMAG00000005248prdm510069.976Petromyzon_marinus
ENSSFOG00015020478prdm59977.720ENSPFOG00000018630prdm59978.238Poecilia_formosa
ENSSFOG00015020478prdm510085.161ENSPLAG00000014148prdm510085.161Poecilia_latipinna
ENSSFOG00015020478prdm510086.755ENSPMEG00000018002prdm510086.755Poecilia_mexicana
ENSSFOG00015020478prdm510086.755ENSPREG00000018366prdm510086.755Poecilia_reticulata
ENSSFOG00015020478prdm510074.326ENSPPYG00000015031PRDM510074.485Pongo_abelii
ENSSFOG00015020478prdm59569.167ENSPCAG00000011671PRDM510068.667Procavia_capensis
ENSSFOG00015020478prdm510089.333ENSPCOG00000022828PRDM510089.333Propithecus_coquereli
ENSSFOG00015020478prdm59571.000ENSPVAG00000012309PRDM510070.833Pteropus_vampyrus
ENSSFOG00015020478prdm510086.424ENSPNYG00000012194prdm510086.424Pundamilia_nyererei
ENSSFOG00015020478prdm59986.513ENSPNAG00000026181prdm59986.349Pygocentrus_nattereri
ENSSFOG00015020478prdm59378.401ENSPNAG00000023191-9979.082Pygocentrus_nattereri
ENSSFOG00015020478prdm59971.902ENSRNOG00000023679Prdm59972.426Rattus_norvegicus
ENSSFOG00015020478prdm510090.000ENSRBIG00000041307PRDM510090.000Rhinopithecus_bieti
ENSSFOG00015020478prdm59560.586ENSRROG00000035343PRDM510066.781Rhinopithecus_roxellana
ENSSFOG00015020478prdm510090.000ENSSBOG00000022100PRDM510090.000Saimiri_boliviensis_boliviensis
ENSSFOG00015020478prdm59173.006ENSSHAG00000003250PRDM510073.620Sarcophilus_harrisii
ENSSFOG00015020478prdm510085.458ENSSMAG00000018844prdm510087.107Scophthalmus_maximus
ENSSFOG00015020478prdm510086.777ENSSDUG00000020397prdm510086.777Seriola_dumerili
ENSSFOG00015020478prdm510086.777ENSSLDG00000013353prdm510086.777Seriola_lalandi_dorsalis
ENSSFOG00015020478prdm58590.598ENSSARG00000014129-6490.598Sorex_araneus
ENSSFOG00015020478prdm510096.667ENSSPUG00000009941PRDM510096.667Sphenodon_punctatus
ENSSFOG00015020478prdm510085.645ENSSPAG00000013866prdm510085.645Stegastes_partitus
ENSSFOG00015020478prdm510075.610ENSSSCG00000009101PRDM510075.610Sus_scrofa
ENSSFOG00015020478prdm59579.236ENSTGUG00000001920PRDM510080.167Taeniopygia_guttata
ENSSFOG00015020478prdm510085.855ENSTRUG00000013850prdm510085.855Takifugu_rubripes
ENSSFOG00015020478prdm510069.854ENSTNIG00000005901prdm510069.854Tetraodon_nigroviridis
ENSSFOG00015020478prdm59567.785ENSTBEG00000015386PRDM58667.785Tupaia_belangeri
ENSSFOG00015020478prdm510074.326ENSTTRG00000010996PRDM510073.851Tursiops_truncatus
ENSSFOG00015020478prdm59586.752ENSUAMG00000009994PRDM57686.752Ursus_americanus
ENSSFOG00015020478prdm59588.608ENSUMAG00000003733PRDM59988.608Ursus_maritimus
ENSSFOG00015020478prdm59764.927ENSVPAG00000007435PRDM510064.437Vicugna_pacos
ENSSFOG00015020478prdm59373.469ENSVVUG00000013192PRDM510073.639Vulpes_vulpes
ENSSFOG00015020478prdm510075.791ENSXETG00000002101prdm510075.791Xenopus_tropicalis
ENSSFOG00015020478prdm510086.942ENSXCOG00000008567prdm510086.942Xiphophorus_couchianus
ENSSFOG00015020478prdm510086.942ENSXMAG00000013825prdm510086.942Xiphophorus_maculatus

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