EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015020574 (Gene tree)
Gene ID: 108930493
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7384 bases
Position: chrKV410925.1:967506-974889
Accession: 108930493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032150	R3H	PF01424.22	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032508	-	3687	XM_018745766	ENSSFOP00015032150	269 (aa)	XP_018601282	A0A1W4ZC13

Gene Model

Click here to download ENSSFOG00015020574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020574	r3hdm4	87	56.303	ENSG00000198858	R3HDM4	90	57.143	Homo_sapiens
ENSSFOG00015020574	r3hdm4	87	55.462	ENSAMEG00000003001	R3HDM4	97	55.462	Ailuropoda_melanoleuca
ENSSFOG00015020574	r3hdm4	92	72.510	ENSACIG00000004672	r3hdm4	97	72.581	Amphilophus_citrinellus
ENSSFOG00015020574	r3hdm4	91	76.923	ENSATEG00000015913	r3hdm4	96	77.049	Anabas_testudineus
ENSSFOG00015020574	r3hdm4	87	56.723	ENSANAG00000029748	R3HDM4	98	56.723	Aotus_nancymaae
ENSSFOG00015020574	r3hdm4	87	55.882	ENSBTAG00000046406	R3HDM4	88	55.882	Bos_taurus
ENSSFOG00015020574	r3hdm4	87	56.303	ENSCJAG00000020114	R3HDM4	88	56.303	Callithrix_jacchus
ENSSFOG00015020574	r3hdm4	87	56.303	ENSCAFG00000019665	R3HDM4	87	56.303	Canis_familiaris
ENSSFOG00015020574	r3hdm4	87	55.882	ENSCAFG00020016880	R3HDM4	87	55.882	Canis_lupus_dingo
ENSSFOG00015020574	r3hdm4	87	55.462	ENSCHIG00000020110	R3HDM4	91	55.462	Capra_hircus
ENSSFOG00015020574	r3hdm4	87	55.870	ENSCCAG00000019955	R3HDM4	89	55.870	Cebus_capucinus
ENSSFOG00015020574	r3hdm4	87	56.250	ENSCATG00000037269	R3HDM4	89	56.250	Cercocebus_atys
ENSSFOG00015020574	r3hdm4	87	54.202	ENSCLAG00000007094	R3HDM4	97	54.202	Chinchilla_lanigera
ENSSFOG00015020574	r3hdm4	87	57.143	ENSCSAG00000012574	R3HDM4	88	57.143	Chlorocebus_sabaeus
ENSSFOG00015020574	r3hdm4	86	64.807	ENSCPBG00000009805	R3HDM4	89	64.807	Chrysemys_picta_bellii
ENSSFOG00015020574	r3hdm4	87	56.303	ENSCANG00000040439	R3HDM4	83	56.303	Colobus_angolensis_palliatus
ENSSFOG00015020574	r3hdm4	86	54.430	ENSCGRG00001021650	R3hdm4	86	55.652	Cricetulus_griseus_chok1gshd
ENSSFOG00015020574	r3hdm4	86	54.430	ENSCGRG00000013169	R3hdm4	86	55.652	Cricetulus_griseus_crigri
ENSSFOG00015020574	r3hdm4	91	68.548	ENSCSEG00000018211	r3hdm4	97	68.421	Cynoglossus_semilaevis
ENSSFOG00015020574	r3hdm4	91	71.888	ENSCVAG00000017127	r3hdm4	97	71.774	Cyprinodon_variegatus
ENSSFOG00015020574	r3hdm4	85	55.319	ENSDORG00000006605	R3hdm4	96	54.894	Dipodomys_ordii
ENSSFOG00015020574	r3hdm4	87	55.042	ENSEASG00005021556	R3HDM4	84	56.277	Equus_asinus_asinus
ENSSFOG00015020574	r3hdm4	87	55.042	ENSECAG00000000003	R3HDM4	87	55.042	Equus_caballus
ENSSFOG00015020574	r3hdm4	87	56.303	ENSFCAG00000042437	R3HDM4	88	56.303	Felis_catus
ENSSFOG00015020574	r3hdm4	85	64.224	ENSFALG00000013938	R3HDM4	96	64.224	Ficedula_albicollis
ENSSFOG00015020574	r3hdm4	87	54.393	ENSFDAG00000017040	R3HDM4	97	54.393	Fukomys_damarensis
ENSSFOG00015020574	r3hdm4	91	71.486	ENSFHEG00000017636	r3hdm4	96	72.358	Fundulus_heteroclitus
ENSSFOG00015020574	r3hdm4	89	66.390	ENSGMOG00000001231	r3hdm4	100	66.390	Gadus_morhua
ENSSFOG00015020574	r3hdm4	100	56.727	ENSGALG00000001998	R3HDM4	89	62.553	Gallus_gallus
ENSSFOG00015020574	r3hdm4	91	70.281	ENSGAFG00000004173	r3hdm4	97	70.565	Gambusia_affinis
ENSSFOG00015020574	r3hdm4	86	65.106	ENSGAGG00000019698	R3HDM4	89	65.106	Gopherus_agassizii
ENSSFOG00015020574	r3hdm4	87	56.303	ENSGGOG00000008040	R3HDM4	97	56.303	Gorilla_gorilla
ENSSFOG00015020574	r3hdm4	92	74.104	ENSHBUG00000014810	r3hdm4	97	74.597	Haplochromis_burtoni
ENSSFOG00015020574	r3hdm4	87	54.622	ENSHGLG00000016194	R3HDM4	88	54.622	Heterocephalus_glaber_female
ENSSFOG00015020574	r3hdm4	91	69.758	ENSHCOG00000008422	r3hdm4	96	69.636	Hippocampus_comes
ENSSFOG00015020574	r3hdm4	93	71.429	ENSIPUG00000006716	r3hdm4	96	72.065	Ictalurus_punctatus
ENSSFOG00015020574	r3hdm4	87	53.361	ENSSTOG00000023015	R3HDM4	97	53.361	Ictidomys_tridecemlineatus
ENSSFOG00015020574	r3hdm4	83	56.957	ENSJJAG00000012475	R3hdm4	87	56.957	Jaculus_jaculus
ENSSFOG00015020574	r3hdm4	91	74.297	ENSKMAG00000005853	r3hdm4	96	74.797	Kryptolebias_marmoratus
ENSSFOG00015020574	r3hdm4	91	73.494	ENSLBEG00000000730	r3hdm4	97	73.387	Labrus_bergylta
ENSSFOG00015020574	r3hdm4	94	61.719	ENSLACG00000016445	R3HDM4	94	63.265	Latimeria_chalumnae
ENSSFOG00015020574	r3hdm4	90	73.984	ENSLOCG00000002423	r3hdm4	95	73.984	Lepisosteus_oculatus
ENSSFOG00015020574	r3hdm4	86	56.432	ENSLAFG00000017796	R3HDM4	91	56.432	Loxodonta_africana
ENSSFOG00015020574	r3hdm4	87	56.723	ENSMFAG00000044131	R3HDM4	88	56.723	Macaca_fascicularis
ENSSFOG00015020574	r3hdm4	81	57.589	ENSMMUG00000009682	R3HDM4	90	57.589	Macaca_mulatta
ENSSFOG00015020574	r3hdm4	87	56.723	ENSMNEG00000044115	R3HDM4	96	56.723	Macaca_nemestrina
ENSSFOG00015020574	r3hdm4	86	56.540	ENSMLEG00000035693	R3HDM4	87	56.540	Mandrillus_leucophaeus
ENSSFOG00015020574	r3hdm4	79	75.000	ENSMAMG00000005652	r3hdm4	88	74.884	Mastacembelus_armatus
ENSSFOG00015020574	r3hdm4	86	54.852	ENSMAUG00000010611	R3hdm4	91	54.852	Mesocricetus_auratus
ENSSFOG00015020574	r3hdm4	87	55.882	ENSMICG00000010124	R3HDM4	88	55.882	Microcebus_murinus
ENSSFOG00015020574	r3hdm4	86	53.191	ENSMOCG00000002646	R3hdm4	89	54.468	Microtus_ochrogaster
ENSSFOG00015020574	r3hdm4	91	73.494	ENSMMOG00000008253	r3hdm4	97	73.387	Mola_mola
ENSSFOG00015020574	r3hdm4	84	60.000	ENSMODG00000005698	R3HDM4	99	60.000	Monodelphis_domestica
ENSSFOG00015020574	r3hdm4	91	71.084	ENSMALG00000018856	r3hdm4	97	71.371	Monopterus_albus
ENSSFOG00015020574	r3hdm4	86	51.915	MGP_CAROLIEiJ_G0015551	R3hdm4	89	53.191	Mus_caroli
ENSSFOG00015020574	r3hdm4	83	53.509	ENSMUSG00000035781	R3hdm4	86	54.825	Mus_musculus
ENSSFOG00015020574	r3hdm4	86	51.915	MGP_PahariEiJ_G0030964	R3hdm4	89	53.191	Mus_pahari
ENSSFOG00015020574	r3hdm4	83	53.947	MGP_SPRETEiJ_G0016369	-	72	55.263	Mus_spretus
ENSSFOG00015020574	r3hdm4	84	58.621	ENSMPUG00000009394	R3HDM4	86	58.621	Mustela_putorius_furo
ENSSFOG00015020574	r3hdm4	92	74.104	ENSNBRG00000004438	r3hdm4	97	74.597	Neolamprologus_brichardi
ENSSFOG00015020574	r3hdm4	82	53.913	ENSNLEG00000001022	R3HDM4	99	53.913	Nomascus_leucogenys
ENSSFOG00015020574	r3hdm4	86	58.475	ENSMEUG00000011020	R3HDM4	99	58.475	Notamacropus_eugenii
ENSSFOG00015020574	r3hdm4	100	49.635	ENSODEG00000011745	R3HDM4	88	54.622	Octodon_degus
ENSSFOG00015020574	r3hdm4	92	74.104	ENSONIG00000012675	r3hdm4	90	74.597	Oreochromis_niloticus
ENSSFOG00015020574	r3hdm4	91	72.289	ENSOMEG00000003005	r3hdm4	97	72.177	Oryzias_melastigma
ENSSFOG00015020574	r3hdm4	86	55.085	ENSOGAG00000025656	R3HDM4	89	55.085	Otolemur_garnettii
ENSSFOG00015020574	r3hdm4	87	55.462	ENSOARG00000009945	R3HDM4	97	55.462	Ovis_aries
ENSSFOG00015020574	r3hdm4	87	56.303	ENSPPAG00000042371	R3HDM4	97	56.303	Pan_paniscus
ENSSFOG00015020574	r3hdm4	87	56.723	ENSPANG00000015203	R3HDM4	88	56.723	Papio_anubis
ENSSFOG00015020574	r3hdm4	100	70.741	ENSPKIG00000007421	r3hdm4	100	70.741	Paramormyrops_kingsleyae
ENSSFOG00015020574	r3hdm4	91	64.400	ENSPMGG00000020467	r3hdm4	97	64.659	Periophthalmus_magnuspinnatus
ENSSFOG00015020574	r3hdm4	86	54.701	ENSPEMG00000008365	Tmem259	97	54.661	Peromyscus_maniculatus_bairdii
ENSSFOG00015020574	r3hdm4	91	69.880	ENSPFOG00000003199	r3hdm4	97	70.161	Poecilia_formosa
ENSSFOG00015020574	r3hdm4	91	69.880	ENSPMEG00000014183	r3hdm4	97	70.161	Poecilia_mexicana
ENSSFOG00015020574	r3hdm4	91	69.478	ENSPREG00000010709	r3hdm4	97	69.758	Poecilia_reticulata
ENSSFOG00015020574	r3hdm4	87	56.356	ENSPPYG00000009297	R3HDM4	88	56.356	Pongo_abelii
ENSSFOG00015020574	r3hdm4	55	52.980	ENSPCAG00000010997	R3HDM4	55	52.980	Procavia_capensis
ENSSFOG00015020574	r3hdm4	87	56.723	ENSPCOG00000016785	R3HDM4	88	56.723	Propithecus_coquereli
ENSSFOG00015020574	r3hdm4	92	74.104	ENSPNYG00000017489	r3hdm4	97	74.597	Pundamilia_nyererei
ENSSFOG00015020574	r3hdm4	86	51.915	ENSRNOG00000011489	R3hdm4	89	53.191	Rattus_norvegicus
ENSSFOG00015020574	r3hdm4	87	56.723	ENSRROG00000028842	R3HDM4	88	56.723	Rhinopithecus_roxellana
ENSSFOG00015020574	r3hdm4	87	54.959	ENSSBOG00000019298	R3HDM4	70	56.485	Saimiri_boliviensis_boliviensis
ENSSFOG00015020574	r3hdm4	53	58.904	ENSSHAG00000003036	-	100	58.904	Sarcophilus_harrisii
ENSSFOG00015020574	r3hdm4	91	70.683	ENSSMAG00000021090	r3hdm4	72	70.968	Scophthalmus_maximus
ENSSFOG00015020574	r3hdm4	91	75.904	ENSSDUG00000008488	r3hdm4	97	75.806	Seriola_dumerili
ENSSFOG00015020574	r3hdm4	91	75.904	ENSSLDG00000025328	r3hdm4	97	75.806	Seriola_lalandi_dorsalis
ENSSFOG00015020574	r3hdm4	88	59.504	ENSSPUG00000005434	R3HDM4	95	59.504	Sphenodon_punctatus
ENSSFOG00015020574	r3hdm4	92	71.713	ENSSPAG00000002562	r3hdm4	96	72.065	Stegastes_partitus
ENSSFOG00015020574	r3hdm4	87	55.042	ENSSSCG00000013419	R3HDM4	87	55.042	Sus_scrofa
ENSSFOG00015020574	r3hdm4	73	57.426	ENSTGUG00000000663	R3HDM4	97	57.921	Taeniopygia_guttata
ENSSFOG00015020574	r3hdm4	87	57.447	ENSTTRG00000001470	R3HDM4	97	57.447	Tursiops_truncatus
ENSSFOG00015020574	r3hdm4	81	56.250	ENSUAMG00000005751	R3HDM4	100	56.250	Ursus_americanus
ENSSFOG00015020574	r3hdm4	87	56.303	ENSVVUG00000022685	R3HDM4	87	56.303	Vulpes_vulpes
ENSSFOG00015020574	r3hdm4	92	46.185	ENSXETG00000033624	R3HDM4	94	46.667	Xenopus_tropicalis
ENSSFOG00015020574	r3hdm4	91	70.400	ENSXCOG00000005127	r3hdm4	97	70.683	Xiphophorus_couchianus
ENSSFOG00015020574	r3hdm4	91	70.683	ENSXMAG00000022875	r3hdm4	97	70.968	Xiphophorus_maculatus