EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015020577 (Gene tree)
Gene ID: 108919191
Gene Symbol: srsf10b
Alias: zgc:65772|zgc:77372
Full Name: serine/arginine-rich splicing factor 10-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 5034 bases
Position: chrKV411267.1:2204639-2209672
Accession: 108919191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032158	RRM_1	PF00076.22	8.6e-18	1	1
ENSSFOP00015032154	RRM_1	PF00076.22	9.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032512	-	2109	XM_018727014	ENSSFOP00015032154	260 (aa)	XP_018582530	A0A1W4Y286
ENSSFOT00015032516	-	2055	XM_018727015	ENSSFOP00015032158	242 (aa)	XP_018582531	A0A1W4Y2R3

Gene Model

Click here to download ENSSFOG00015020577's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020577	srsf10b	100	58.608	ENSG00000188529	SRSF10	84	81.034	Homo_sapiens
ENSSFOG00015020577	srsf10b	75	57.436	ENSANAG00000033569	-	84	77.551	Aotus_nancymaae
ENSSFOG00015020577	srsf10b	100	60.630	ENSACLG00000000662	SRSF10	100	62.550	Astatotilapia_calliptera
ENSSFOG00015020577	srsf10b	60	69.444	ENSCHIG00000000308	-	61	80.808	Capra_hircus
ENSSFOG00015020577	srsf10b	100	58.608	ENSTSYG00000009439	-	67	83.636	Carlito_syrichta
ENSSFOG00015020577	srsf10b	96	54.580	ENSCAPG00000014746	SRSF10	54	87.356	Cavia_aperea
ENSSFOG00015020577	srsf10b	100	58.608	ENSCPOG00000034102	SRSF10	60	83.636	Cavia_porcellus
ENSSFOG00015020577	srsf10b	100	58.608	ENSCCAG00000022497	SRSF10	84	81.034	Cebus_capucinus
ENSSFOG00015020577	srsf10b	100	58.608	ENSCATG00000031598	SRSF10	67	83.636	Cercocebus_atys
ENSSFOG00015020577	srsf10b	100	58.608	ENSCLAG00000015555	SRSF10	60	83.636	Chinchilla_lanigera
ENSSFOG00015020577	srsf10b	100	58.608	ENSCGRG00001017946	Srsf10	60	83.636	Cricetulus_griseus_chok1gshd
ENSSFOG00015020577	srsf10b	100	61.710	ENSDORG00000024574	Srsf10	60	83.636	Dipodomys_ordii
ENSSFOG00015020577	srsf10b	100	58.608	ENSFCAG00000045556	SRSF10	67	83.636	Felis_catus
ENSSFOG00015020577	srsf10b	54	66.154	ENSFDAG00000005977	-	56	76.471	Fukomys_damarensis
ENSSFOG00015020577	srsf10b	63	85.276	ENSGAFG00000014771	srsf10b	62	84.483	Gambusia_affinis
ENSSFOG00015020577	srsf10b	100	58.608	ENSGGOG00000000392	SRSF10	84	81.034	Gorilla_gorilla
ENSSFOG00015020577	srsf10b	63	56.707	ENSGGOG00000042323	-	64	72.449	Gorilla_gorilla
ENSSFOG00015020577	srsf10b	100	60.630	ENSHBUG00000010070	SRSF10	100	62.550	Haplochromis_burtoni
ENSSFOG00015020577	srsf10b	100	57.143	ENSHGLG00000010879	-	60	83.636	Heterocephalus_glaber_female
ENSSFOG00015020577	srsf10b	100	58.608	ENSSTOG00000000956	SRSF10	60	83.636	Ictidomys_tridecemlineatus
ENSSFOG00015020577	srsf10b	100	58.608	ENSJJAG00000009074	Srsf10	60	83.636	Jaculus_jaculus
ENSSFOG00015020577	srsf10b	67	69.325	ENSJJAG00000021270	-	51	76.364	Jaculus_jaculus
ENSSFOG00015020577	srsf10b	100	78.543	ENSLOCG00000005685	srsf10b	100	77.236	Lepisosteus_oculatus
ENSSFOG00015020577	srsf10b	100	58.608	ENSMFAG00000046011	SRSF10	84	81.034	Macaca_fascicularis
ENSSFOG00015020577	srsf10b	100	57.509	ENSMMUG00000038562	-	66	80.909	Macaca_mulatta
ENSSFOG00015020577	srsf10b	100	58.608	ENSMNEG00000041500	SRSF10	67	83.636	Macaca_nemestrina
ENSSFOG00015020577	srsf10b	100	58.608	ENSMLEG00000016013	SRSF10	67	83.636	Mandrillus_leucophaeus
ENSSFOG00015020577	srsf10b	96	50.598	ENSMLEG00000033834	-	96	45.174	Mandrillus_leucophaeus
ENSSFOG00015020577	srsf10b	100	61.132	ENSMZEG00005008188	SRSF10	100	62.977	Maylandia_zebra
ENSSFOG00015020577	srsf10b	100	58.608	ENSMAUG00000019452	Srsf10	60	83.636	Mesocricetus_auratus
ENSSFOG00015020577	srsf10b	75	51.691	ENSMICG00000037744	-	89	44.493	Microcebus_murinus
ENSSFOG00015020577	srsf10b	100	58.608	ENSMICG00000047638	SRSF10	84	81.034	Microcebus_murinus
ENSSFOG00015020577	srsf10b	78	66.019	ENSMODG00000013020	-	54	81.982	Monodelphis_domestica
ENSSFOG00015020577	srsf10b	100	58.608	MGP_CAROLIEiJ_G0026645	Srsf10	60	83.636	Mus_caroli
ENSSFOG00015020577	srsf10b	100	58.608	ENSMUSG00000028676	Srsf10	60	83.636	Mus_musculus
ENSSFOG00015020577	srsf10b	100	58.608	ENSNGAG00000000067	Srsf10	60	83.636	Nannospalax_galili
ENSSFOG00015020577	srsf10b	100	58.608	ENSNLEG00000027520	SRSF10	67	83.636	Nomascus_leucogenys
ENSSFOG00015020577	srsf10b	100	52.479	ENSODEG00000018292	-	51	72.727	Octodon_degus
ENSSFOG00015020577	srsf10b	82	64.019	ENSODEG00000019549	-	51	80.909	Octodon_degus
ENSSFOG00015020577	srsf10b	100	52.479	ENSODEG00000007110	-	50	72.642	Octodon_degus
ENSSFOG00015020577	srsf10b	100	58.608	ENSPPAG00000032557	SRSF10	84	81.034	Pan_paniscus
ENSSFOG00015020577	srsf10b	100	58.608	ENSPPRG00000005806	SRSF10	67	83.636	Panthera_pardus
ENSSFOG00015020577	srsf10b	100	58.242	ENSPTIG00000014137	SRSF10	66	82.727	Panthera_tigris_altaica
ENSSFOG00015020577	srsf10b	100	58.608	ENSPTRG00000044753	SRSF10	67	83.636	Pan_troglodytes
ENSSFOG00015020577	srsf10b	100	58.608	ENSPANG00000021680	SRSF10	67	83.636	Papio_anubis
ENSSFOG00015020577	srsf10b	60	83.444	ENSPREG00000008383	srsf10b	62	84.483	Poecilia_reticulata
ENSSFOG00015020577	srsf10b	100	58.608	ENSPCOG00000022379	SRSF10	67	83.636	Propithecus_coquereli
ENSSFOG00015020577	srsf10b	100	60.630	ENSPNYG00000012923	SRSF10	100	62.550	Pundamilia_nyererei
ENSSFOG00015020577	srsf10b	100	58.608	ENSRBIG00000028456	SRSF10	67	83.636	Rhinopithecus_bieti
ENSSFOG00015020577	srsf10b	100	58.608	ENSRROG00000043248	SRSF10	67	83.636	Rhinopithecus_roxellana
ENSSFOG00015020577	srsf10b	100	58.608	ENSSBOG00000019550	SRSF10	67	83.636	Saimiri_boliviensis_boliviensis
ENSSFOG00015020577	srsf10b	100	63.258	ENSSMAG00000003165	SRSF10	100	63.636	Scophthalmus_maximus
ENSSFOG00015020577	srsf10b	100	58.608	ENSSSCG00000036293	SRSF10	84	81.034	Sus_scrofa