EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015020664 (Gene tree)
Gene ID: 108920952
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 7437 bases
Position: chrKV411299.1:645179-652615
Accession: 108920952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032297	tRNA_Me_trans	PF03054.16	3.8e-117	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032657	-	3094	XM_018730092	ENSSFOP00015032297	381 (aa)	XP_018585608	A0A1W4YBD5

Gene Model

Click here to download ENSSFOG00015020664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020664	trmu	98	69.251	ENSG00000100416	TRMU	100	69.486	Homo_sapiens
ENSSFOG00015020664	trmu	97	76.694	ENSAPOG00000014458	trmu	88	76.694	Acanthochromis_polyacanthus
ENSSFOG00015020664	trmu	98	68.984	ENSAMEG00000003319	TRMU	90	68.984	Ailuropoda_melanoleuca
ENSSFOG00015020664	trmu	99	72.559	ENSACIG00000002101	trmu	91	72.559	Amphilophus_citrinellus
ENSSFOG00015020664	trmu	97	76.965	ENSAOCG00000013155	trmu	88	76.965	Amphiprion_ocellaris
ENSSFOG00015020664	trmu	97	76.694	ENSAPEG00000013350	trmu	88	76.694	Amphiprion_percula
ENSSFOG00015020664	trmu	96	77.869	ENSATEG00000007814	trmu	89	77.869	Anabas_testudineus
ENSSFOG00015020664	trmu	98	71.390	ENSAPLG00000016380	TRMU	95	71.390	Anas_platyrhynchos
ENSSFOG00015020664	trmu	97	71.196	ENSACAG00000007720	TRMU	88	71.196	Anolis_carolinensis
ENSSFOG00015020664	trmu	99	68.241	ENSANAG00000038053	TRMU	90	68.241	Aotus_nancymaae
ENSSFOG00015020664	trmu	99	75.462	ENSACLG00000005395	trmu	89	77.545	Astatotilapia_calliptera
ENSSFOG00015020664	trmu	97	77.568	ENSAMXG00000005282	trmu	90	77.568	Astyanax_mexicanus
ENSSFOG00015020664	trmu	99	68.158	ENSBTAG00000005595	TRMU	99	62.738	Bos_taurus
ENSSFOG00015020664	trmu	93	38.462	WBGene00007114	mttu-1	91	38.462	Caenorhabditis_elegans
ENSSFOG00015020664	trmu	98	67.647	ENSCJAG00000000198	TRMU	89	67.647	Callithrix_jacchus
ENSSFOG00015020664	trmu	98	69.251	ENSCAFG00000000779	TRMU	88	69.251	Canis_familiaris
ENSSFOG00015020664	trmu	98	69.251	ENSCAFG00020009184	TRMU	88	69.251	Canis_lupus_dingo
ENSSFOG00015020664	trmu	99	68.158	ENSCHIG00000017074	TRMU	91	68.158	Capra_hircus
ENSSFOG00015020664	trmu	98	68.901	ENSTSYG00000003853	TRMU	89	68.901	Carlito_syrichta
ENSSFOG00015020664	trmu	98	66.582	ENSCAPG00000013034	TRMU	92	66.582	Cavia_aperea
ENSSFOG00015020664	trmu	98	69.519	ENSCPOG00000020780	TRMU	89	69.519	Cavia_porcellus
ENSSFOG00015020664	trmu	98	68.449	ENSCCAG00000021641	TRMU	89	68.449	Cebus_capucinus
ENSSFOG00015020664	trmu	98	67.112	ENSCATG00000032800	TRMU	89	67.112	Cercocebus_atys
ENSSFOG00015020664	trmu	98	69.786	ENSCLAG00000017269	TRMU	89	69.786	Chinchilla_lanigera
ENSSFOG00015020664	trmu	98	67.647	ENSCSAG00000005279	TRMU	89	67.647	Chlorocebus_sabaeus
ENSSFOG00015020664	trmu	96	71.978	ENSCPBG00000011621	TRMU	91	71.978	Chrysemys_picta_bellii
ENSSFOG00015020664	trmu	96	42.896	ENSCING00000019371	-	90	42.896	Ciona_intestinalis
ENSSFOG00015020664	trmu	97	68.194	ENSCANG00000041645	TRMU	88	68.194	Colobus_angolensis_palliatus
ENSSFOG00015020664	trmu	98	68.182	ENSCGRG00001001739	Trmu	89	68.182	Cricetulus_griseus_chok1gshd
ENSSFOG00015020664	trmu	98	62.834	ENSCGRG00000002781	Trmu	89	62.834	Cricetulus_griseus_crigri
ENSSFOG00015020664	trmu	100	70.079	ENSCSEG00000012382	trmu	91	70.079	Cynoglossus_semilaevis
ENSSFOG00015020664	trmu	99	75.726	ENSCVAG00000001366	trmu	91	75.726	Cyprinodon_variegatus
ENSSFOG00015020664	trmu	94	77.500	ENSDARG00000043734	trmu	87	77.500	Danio_rerio
ENSSFOG00015020664	trmu	68	61.686	ENSDNOG00000047245	-	95	60.219	Dasypus_novemcinctus
ENSSFOG00015020664	trmu	97	69.189	ENSDORG00000007455	Trmu	90	69.189	Dipodomys_ordii
ENSSFOG00015020664	trmu	93	43.059	FBgn0040337	CG3021	87	43.059	Drosophila_melanogaster
ENSSFOG00015020664	trmu	93	55.432	ENSEBUG00000007454	trmu	89	55.432	Eptatretus_burgeri
ENSSFOG00015020664	trmu	98	70.053	ENSEASG00005021725	TRMU	89	70.053	Equus_asinus_asinus
ENSSFOG00015020664	trmu	98	70.053	ENSECAG00000000467	TRMU	90	69.903	Equus_caballus
ENSSFOG00015020664	trmu	78	53.535	ENSEEUG00000000074	-	71	53.535	Erinaceus_europaeus
ENSSFOG00015020664	trmu	99	75.853	ENSELUG00000009464	trmu	90	76.877	Esox_lucius
ENSSFOG00015020664	trmu	98	68.984	ENSFCAG00000006533	TRMU	89	68.984	Felis_catus
ENSSFOG00015020664	trmu	98	69.713	ENSFALG00000010035	TRMU	97	69.713	Ficedula_albicollis
ENSSFOG00015020664	trmu	98	69.519	ENSFDAG00000017472	TRMU	95	69.519	Fukomys_damarensis
ENSSFOG00015020664	trmu	98	76.203	ENSFHEG00000003162	trmu	90	76.203	Fundulus_heteroclitus
ENSSFOG00015020664	trmu	97	67.473	ENSGMOG00000001323	trmu	92	67.473	Gadus_morhua
ENSSFOG00015020664	trmu	99	70.052	ENSGALG00000031922	TRMU	91	70.052	Gallus_gallus
ENSSFOG00015020664	trmu	96	77.808	ENSGAFG00000013331	trmu	88	77.808	Gambusia_affinis
ENSSFOG00015020664	trmu	99	73.247	ENSGACG00000019024	trmu	91	73.247	Gasterosteus_aculeatus
ENSSFOG00015020664	trmu	98	69.251	ENSGGOG00000000203	TRMU	89	69.251	Gorilla_gorilla
ENSSFOG00015020664	trmu	99	74.934	ENSHBUG00000023421	trmu	89	76.946	Haplochromis_burtoni
ENSSFOG00015020664	trmu	98	67.914	ENSHGLG00000009278	TRMU	89	67.914	Heterocephalus_glaber_female
ENSSFOG00015020664	trmu	98	67.914	ENSHGLG00100018863	TRMU	89	67.914	Heterocephalus_glaber_male
ENSSFOG00015020664	trmu	99	75.000	ENSHCOG00000013459	trmu	91	75.000	Hippocampus_comes
ENSSFOG00015020664	trmu	96	79.396	ENSIPUG00000009785	trmu	90	79.396	Ictalurus_punctatus
ENSSFOG00015020664	trmu	98	69.519	ENSSTOG00000010993	TRMU	89	69.519	Ictidomys_tridecemlineatus
ENSSFOG00015020664	trmu	98	68.717	ENSJJAG00000000667	Trmu	90	68.717	Jaculus_jaculus
ENSSFOG00015020664	trmu	99	74.670	ENSKMAG00000008516	trmu	91	74.670	Kryptolebias_marmoratus
ENSSFOG00015020664	trmu	99	74.934	ENSLBEG00000018831	trmu	91	74.934	Labrus_bergylta
ENSSFOG00015020664	trmu	97	76.757	ENSLACG00000013713	TRMU	88	76.757	Latimeria_chalumnae
ENSSFOG00015020664	trmu	96	81.096	ENSLOCG00000016066	trmu	87	81.096	Lepisosteus_oculatus
ENSSFOG00015020664	trmu	100	58.594	ENSLAFG00000005129	TRMU	91	58.594	Loxodonta_africana
ENSSFOG00015020664	trmu	98	67.647	ENSMFAG00000039767	TRMU	89	67.647	Macaca_fascicularis
ENSSFOG00015020664	trmu	98	67.647	ENSMMUG00000000807	TRMU	89	67.647	Macaca_mulatta
ENSSFOG00015020664	trmu	98	67.647	ENSMNEG00000028164	TRMU	89	67.647	Macaca_nemestrina
ENSSFOG00015020664	trmu	98	67.112	ENSMLEG00000033884	TRMU	89	67.112	Mandrillus_leucophaeus
ENSSFOG00015020664	trmu	99	74.670	ENSMAMG00000004717	trmu	91	74.670	Mastacembelus_armatus
ENSSFOG00015020664	trmu	99	75.462	ENSMZEG00005015797	trmu	91	75.462	Maylandia_zebra
ENSSFOG00015020664	trmu	87	69.822	ENSMGAG00000007550	TRMU	99	69.822	Meleagris_gallopavo
ENSSFOG00015020664	trmu	98	67.380	ENSMAUG00000022282	Trmu	90	67.380	Mesocricetus_auratus
ENSSFOG00015020664	trmu	98	68.717	ENSMICG00000029046	TRMU	91	68.717	Microcebus_murinus
ENSSFOG00015020664	trmu	99	67.819	ENSMOCG00000014641	Trmu	90	67.819	Microtus_ochrogaster
ENSSFOG00015020664	trmu	97	75.815	ENSMMOG00000007229	trmu	88	75.815	Mola_mola
ENSSFOG00015020664	trmu	99	67.717	ENSMODG00000007433	TRMU	89	67.717	Monodelphis_domestica
ENSSFOG00015020664	trmu	97	74.324	ENSMALG00000007721	trmu	89	74.324	Monopterus_albus
ENSSFOG00015020664	trmu	99	67.819	MGP_CAROLIEiJ_G0020134	Trmu	90	67.819	Mus_caroli
ENSSFOG00015020664	trmu	98	67.914	ENSMUSG00000022386	Trmu	90	67.914	Mus_musculus
ENSSFOG00015020664	trmu	98	67.647	MGP_PahariEiJ_G0020139	Trmu	90	67.647	Mus_pahari
ENSSFOG00015020664	trmu	98	67.914	MGP_SPRETEiJ_G0021031	Trmu	90	67.914	Mus_spretus
ENSSFOG00015020664	trmu	99	68.312	ENSMPUG00000002523	TRMU	91	68.312	Mustela_putorius_furo
ENSSFOG00015020664	trmu	98	68.984	ENSNGAG00000005132	Trmu	90	68.984	Nannospalax_galili
ENSSFOG00015020664	trmu	99	75.462	ENSNBRG00000022690	trmu	91	77.027	Neolamprologus_brichardi
ENSSFOG00015020664	trmu	97	68.464	ENSNLEG00000015773	TRMU	88	68.464	Nomascus_leucogenys
ENSSFOG00015020664	trmu	77	60.000	ENSMEUG00000000216	TRMU	89	60.000	Notamacropus_eugenii
ENSSFOG00015020664	trmu	98	69.519	ENSODEG00000014745	TRMU	90	69.251	Octodon_degus
ENSSFOG00015020664	trmu	99	74.934	ENSONIG00000009821	trmu	91	74.934	Oreochromis_niloticus
ENSSFOG00015020664	trmu	100	65.535	ENSOANG00000001891	TRMU	97	65.535	Ornithorhynchus_anatinus
ENSSFOG00015020664	trmu	98	68.717	ENSOCUG00000003664	TRMU	89	68.717	Oryctolagus_cuniculus
ENSSFOG00015020664	trmu	97	72.432	ENSORLG00000019015	trmu	89	72.432	Oryzias_latipes
ENSSFOG00015020664	trmu	97	72.703	ENSORLG00020006830	trmu	89	72.703	Oryzias_latipes_hni
ENSSFOG00015020664	trmu	97	72.703	ENSORLG00015003907	trmu	89	72.703	Oryzias_latipes_hsok
ENSSFOG00015020664	trmu	64	73.061	ENSOMEG00000015541	trmu	88	73.061	Oryzias_melastigma
ENSSFOG00015020664	trmu	98	67.380	ENSOGAG00000008096	TRMU	90	67.380	Otolemur_garnettii
ENSSFOG00015020664	trmu	91	65.896	ENSOARG00000019475	TRMU	84	65.896	Ovis_aries
ENSSFOG00015020664	trmu	98	68.984	ENSPPAG00000033944	TRMU	89	68.984	Pan_paniscus
ENSSFOG00015020664	trmu	97	68.919	ENSPPRG00000004197	TRMU	90	67.979	Panthera_pardus
ENSSFOG00015020664	trmu	67	69.650	ENSPTIG00000014122	TRMU	94	69.650	Panthera_tigris_altaica
ENSSFOG00015020664	trmu	98	68.984	ENSPTRG00000014510	TRMU	89	68.984	Pan_troglodytes
ENSSFOG00015020664	trmu	98	66.756	ENSPANG00000023074	TRMU	94	66.756	Papio_anubis
ENSSFOG00015020664	trmu	98	82.527	ENSPKIG00000002849	trmu	90	82.527	Paramormyrops_kingsleyae
ENSSFOG00015020664	trmu	96	73.077	ENSPSIG00000013020	TRMU	95	73.077	Pelodiscus_sinensis
ENSSFOG00015020664	trmu	97	75.405	ENSPMGG00000004083	trmu	89	75.405	Periophthalmus_magnuspinnatus
ENSSFOG00015020664	trmu	98	67.112	ENSPEMG00000014007	Trmu	90	67.112	Peromyscus_maniculatus_bairdii
ENSSFOG00015020664	trmu	97	69.272	ENSPCIG00000009923	TRMU	90	69.110	Phascolarctos_cinereus
ENSSFOG00015020664	trmu	100	75.066	ENSPFOG00000008197	trmu	85	75.066	Poecilia_formosa
ENSSFOG00015020664	trmu	100	75.066	ENSPLAG00000008414	trmu	92	75.066	Poecilia_latipinna
ENSSFOG00015020664	trmu	99	75.000	ENSPMEG00000004326	trmu	91	75.000	Poecilia_mexicana
ENSSFOG00015020664	trmu	100	75.066	ENSPREG00000007980	trmu	92	75.066	Poecilia_reticulata
ENSSFOG00015020664	trmu	98	68.984	ENSPPYG00000011949	TRMU	89	68.984	Pongo_abelii
ENSSFOG00015020664	trmu	99	62.533	ENSPCAG00000013462	TRMU	97	62.533	Procavia_capensis
ENSSFOG00015020664	trmu	98	68.717	ENSPCOG00000016539	TRMU	90	68.717	Propithecus_coquereli
ENSSFOG00015020664	trmu	97	62.703	ENSPVAG00000013202	TRMU	90	62.567	Pteropus_vampyrus
ENSSFOG00015020664	trmu	99	75.462	ENSPNYG00000005629	trmu	91	75.462	Pundamilia_nyererei
ENSSFOG00015020664	trmu	98	77.895	ENSPNAG00000006339	trmu	89	77.895	Pygocentrus_nattereri
ENSSFOG00015020664	trmu	98	67.647	ENSRNOG00000016465	Trmu	90	67.647	Rattus_norvegicus
ENSSFOG00015020664	trmu	98	66.845	ENSRBIG00000038973	TRMU	89	66.845	Rhinopithecus_bieti
ENSSFOG00015020664	trmu	98	67.112	ENSRROG00000004267	TRMU	89	67.112	Rhinopithecus_roxellana
ENSSFOG00015020664	trmu	91	31.099	YDL033C	SLM3	84	31.099	Saccharomyces_cerevisiae
ENSSFOG00015020664	trmu	98	68.182	ENSSBOG00000030184	TRMU	89	68.182	Saimiri_boliviensis_boliviensis
ENSSFOG00015020664	trmu	97	76.423	ENSSMAG00000019450	trmu	89	76.423	Scophthalmus_maximus
ENSSFOG00015020664	trmu	99	73.421	ENSSDUG00000011913	trmu	91	73.421	Seriola_dumerili
ENSSFOG00015020664	trmu	99	73.158	ENSSLDG00000011684	trmu	91	73.158	Seriola_lalandi_dorsalis
ENSSFOG00015020664	trmu	99	59.574	ENSSPUG00000017123	TRMU	88	59.574	Sphenodon_punctatus
ENSSFOG00015020664	trmu	99	72.895	ENSSPAG00000021875	trmu	91	72.895	Stegastes_partitus
ENSSFOG00015020664	trmu	97	70.541	ENSSSCG00000000007	TRMU	90	69.029	Sus_scrofa
ENSSFOG00015020664	trmu	96	72.877	ENSTGUG00000003663	-	98	72.877	Taeniopygia_guttata
ENSSFOG00015020664	trmu	97	75.881	ENSTRUG00000001231	trmu	89	75.881	Takifugu_rubripes
ENSSFOG00015020664	trmu	97	75.202	ENSTNIG00000010484	trmu	87	75.202	Tetraodon_nigroviridis
ENSSFOG00015020664	trmu	80	58.333	ENSTBEG00000011276	-	78	58.333	Tupaia_belangeri
ENSSFOG00015020664	trmu	97	70.081	ENSTTRG00000004160	TRMU	88	70.081	Tursiops_truncatus
ENSSFOG00015020664	trmu	68	68.846	ENSUAMG00000024825	TRMU	87	68.846	Ursus_americanus
ENSSFOG00015020664	trmu	98	58.777	ENSUMAG00000019079	TRMU	98	68.846	Ursus_maritimus
ENSSFOG00015020664	trmu	56	58.491	ENSVPAG00000000685	-	97	58.491	Vicugna_pacos
ENSSFOG00015020664	trmu	97	69.459	ENSVVUG00000024963	TRMU	88	69.459	Vulpes_vulpes
ENSSFOG00015020664	trmu	96	73.913	ENSXETG00000023304	trmu	86	73.913	Xenopus_tropicalis
ENSSFOG00015020664	trmu	100	74.803	ENSXCOG00000015105	trmu	91	74.803	Xiphophorus_couchianus
ENSSFOG00015020664	trmu	100	75.066	ENSXMAG00000006697	trmu	92	75.066	Xiphophorus_maculatus