EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020732 (Gene tree)
Gene ID: 108931815
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 2847 bases
Position: chrKV410964.1:516823-519669
Accession: 108931815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032418	MMR_HSR1	PF01926.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032778	-	1875	XM_018747834	ENSSFOP00015032418	213 (aa)	XP_018603350	A0A1W4ZRG9

Gene Model

Click here to download ENSSFOG00015020732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020732	rab42a	76	32.515	ENSSFOG00015003051	hrasb	92	31.818
ENSSFOG00015020732	rab42a	100	60.094	ENSSFOG00015003628	-	100	60.094
ENSSFOG00015020732	rab42a	80	42.690	ENSSFOG00015021754	rab13	85	42.690
ENSSFOG00015020732	rab42a	87	41.398	ENSSFOG00015011318	-	86	41.398
ENSSFOG00015020732	rab42a	100	34.419	ENSSFOG00015015336	rab4a	100	34.419
ENSSFOG00015020732	rab42a	56	30.000	ENSSFOG00015015338	-	65	30.000
ENSSFOG00015020732	rab42a	84	42.135	ENSSFOG00015001293	rab1ab	87	42.135
ENSSFOG00015020732	rab42a	80	36.000	ENSSFOG00015003259	rab9a	81	36.000
ENSSFOG00015020732	rab42a	74	36.943	ENSSFOG00015021115	-	72	36.943
ENSSFOG00015020732	rab42a	88	47.340	ENSSFOG00015015034	rab2a	88	47.340
ENSSFOG00015020732	rab42a	100	48.357	ENSSFOG00015009244	rab39bb	100	48.357
ENSSFOG00015020732	rab42a	81	32.759	ENSSFOG00015004325	rab34a	67	32.759
ENSSFOG00015020732	rab42a	74	41.401	ENSSFOG00015002077	rab6a	75	41.401
ENSSFOG00015020732	rab42a	97	34.466	ENSSFOG00015019202	RAB6B	94	34.466
ENSSFOG00015020732	rab42a	63	40.299	ENSSFOG00015014423	rras2	75	40.299
ENSSFOG00015020732	rab42a	100	56.808	ENSSFOG00015018421	rab39b	100	56.808
ENSSFOG00015020732	rab42a	97	36.408	ENSSFOG00015004941	rab41	91	36.408
ENSSFOG00015020732	rab42a	100	48.131	ENSSFOG00015016000	-	97	48.131
ENSSFOG00015020732	rab42a	84	40.223	ENSSFOG00015008657	rab25a	84	40.223
ENSSFOG00015020732	rab42a	84	42.135	ENSSFOG00015021448	-	84	42.135
ENSSFOG00015020732	rab42a	85	31.633	ENSSFOG00015006245	-	81	31.633
ENSSFOG00015020732	rab42a	77	36.585	ENSSFOG00015009988	-	74	36.585
ENSSFOG00015020732	rab42a	98	37.850	ENSSFOG00015012785	rab14	97	37.850
ENSSFOG00015020732	rab42a	80	37.143	ENSSFOG00015000053	rab9a	79	37.143
ENSSFOG00015020732	rab42a	83	40.678	ENSSFOG00015024042	rab11a	81	40.678
ENSSFOG00015020732	rab42a	74	35.625	ENSSFOG00015009566	si:dkey-13a21.4	77	35.625
ENSSFOG00015020732	rab42a	88	30.808	ENSSFOG00015019261	rasl11a	77	30.808
ENSSFOG00015020732	rab42a	73	35.443	ENSSFOG00015016156	rab36	61	35.443
ENSSFOG00015020732	rab42a	81	44.186	ENSSFOG00015006414	-	81	44.186
ENSSFOG00015020732	rab42a	77	39.394	ENSSFOG00015017444	rab18a	67	39.394
ENSSFOG00015020732	rab42a	77	34.756	ENSSFOG00015012085	rab22a	84	34.756
ENSSFOG00015020732	rab42a	88	61.053	ENSSFOG00015012088	rab42	85	61.053
ENSSFOG00015020732	rab42a	85	32.258	ENSSFOG00015005076	zgc:100918	89	32.258
ENSSFOG00015020732	rab42a	88	30.319	ENSSFOG00015020738	rabl2	83	30.612
ENSSFOG00015020732	rab42a	72	42.857	ENSSFOG00015020112	rab33b	92	35.071
ENSSFOG00015020732	rab42a	85	32.258	ENSSFOG00015011771	-	89	32.258
ENSSFOG00015020732	rab42a	76	33.129	ENSSFOG00015011157	-	92	32.386
ENSSFOG00015020732	rab42a	76	33.133	ENSSFOG00015020012	rab7a	79	33.133
ENSSFOG00015020732	rab42a	71	33.775	ENSSFOG00015006846	-	86	32.927
ENSSFOG00015020732	rab42a	75	40.491	ENSSFOG00015004253	rab33a	73	40.244
ENSSFOG00015020732	rab42a	76	35.802	ENSSFOG00015014517	rab5a	74	35.802
ENSSFOG00015020732	rab42a	50	32.075	ENSSFOG00015014993	-	52	32.075
ENSSFOG00015020732	rab42a	82	34.091	ENSSFOG00015014992	rhebl1	93	34.091
ENSSFOG00015020732	rab42a	100	38.028	ENSSFOG00015005464	zgc:171927	98	38.028
ENSSFOG00015020732	rab42a	86	40.761	ENSSFOG00015009042	rab11bb	83	40.761
ENSSFOG00015020732	rab42a	75	46.875	ENSSFOG00015017296	rab15	75	46.875
ENSSFOG00015020732	rab42a	98	37.799	ENSSFOG00015008618	rab11al	95	37.799
ENSSFOG00015020732	rab42a	75	32.919	ENSSFOG00015023903	KRAS	90	32.184
ENSSFOG00015020732	rab42a	76	33.133	ENSSFOG00015021180	RAB7A	79	33.133
ENSSFOG00015020732	rab42a	89	34.031	ENSSFOG00015024034	rab33ba	92	33.862
ENSSFOG00015020732	rab42a	81	33.908	ENSSFOG00015005188	rab34	71	34.839
ENSSFOG00015020732	rab42a	79	33.929	ENSSFOG00015023790	rheb	89	33.929
ENSSFOG00015020732	rab42a	71	37.500	ENSSFOG00015020319	mras	84	37.195
ENSSFOG00015020732	rab42a	97	35.922	ENSSFOG00015011268	RAB41	93	35.922
ENSSFOG00015020732	rab42a	61	30.597	ENSSFOG00015023529	arl5c	70	30.597
ENSSFOG00015020732	rab42a	92	38.000	ENSSFOG00015006175	zgc:101559	84	38.000
ENSSFOG00015020732	rab42a	84	41.573	ENSSFOG00015011140	-	86	41.573
ENSSFOG00015020732	rab42a	86	39.674	ENSSFOG00015020836	rab1ba	91	39.674
ENSSFOG00015020732	rab42a	88	47.872	ENSSFOG00015000865	-	88	47.872
ENSSFOG00015020732	rab42a	77	43.293	ENSSFOG00015006076	rab35	80	43.293
ENSSFOG00015020732	rab42a	77	38.323	ENSSFOG00015010492	rab9b	82	38.323
ENSSFOG00015020732	rab42a	73	36.076	ENSSFOG00015012604	rab23	73	36.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020732	rab42a	100	84.862	ENSAPOG00000009188	rab42a	100	86.239	Acanthochromis_polyacanthus
ENSSFOG00015020732	rab42a	100	84.862	ENSACIG00000003102	rab42a	100	85.321	Amphilophus_citrinellus
ENSSFOG00015020732	rab42a	100	84.862	ENSAOCG00000012921	rab42a	83	85.321	Amphiprion_ocellaris
ENSSFOG00015020732	rab42a	100	84.862	ENSAPEG00000007713	rab42a	83	85.321	Amphiprion_percula
ENSSFOG00015020732	rab42a	100	84.404	ENSATEG00000009052	rab42a	100	84.404	Anabas_testudineus
ENSSFOG00015020732	rab42a	100	85.714	ENSACLG00000007514	rab42a	100	85.714	Astatotilapia_calliptera
ENSSFOG00015020732	rab42a	100	89.202	ENSAMXG00000032729	rab42a	100	89.202	Astyanax_mexicanus
ENSSFOG00015020732	rab42a	100	82.110	ENSCSEG00000010582	rab42a	100	82.110	Cynoglossus_semilaevis
ENSSFOG00015020732	rab42a	100	49.533	ENSDARG00000102580	CU571310.1	99	49.533	Danio_rerio
ENSSFOG00015020732	rab42a	100	88.263	ENSDARG00000034215	rab42a	100	88.263	Danio_rerio
ENSSFOG00015020732	rab42a	100	84.722	ENSELUG00000010345	rab42a	100	84.722	Esox_lucius
ENSSFOG00015020732	rab42a	100	84.862	ENSFHEG00000013106	rab42a	100	84.862	Fundulus_heteroclitus
ENSSFOG00015020732	rab42a	100	83.486	ENSGAFG00000002141	rab42a	100	83.486	Gambusia_affinis
ENSSFOG00015020732	rab42a	100	85.714	ENSHBUG00000015126	rab42a	82	85.714	Haplochromis_burtoni
ENSSFOG00015020732	rab42a	100	89.202	ENSIPUG00000011376	rab42a	100	89.202	Ictalurus_punctatus
ENSSFOG00015020732	rab42a	100	85.321	ENSKMAG00000007267	rab42a	100	85.780	Kryptolebias_marmoratus
ENSSFOG00015020732	rab42a	100	84.332	ENSLBEG00000001193	rab42a	100	84.793	Labrus_bergylta
ENSSFOG00015020732	rab42a	100	65.728	ENSLACG00000012755	-	100	65.728	Latimeria_chalumnae
ENSSFOG00015020732	rab42a	100	84.507	ENSLOCG00000003453	rab42a	100	84.507	Lepisosteus_oculatus
ENSSFOG00015020732	rab42a	100	52.093	ENSLOCG00000015825	-	99	52.093	Lepisosteus_oculatus
ENSSFOG00015020732	rab42a	100	84.862	ENSMAMG00000002296	rab42a	100	85.321	Mastacembelus_armatus
ENSSFOG00015020732	rab42a	100	85.714	ENSMZEG00005012460	rab42a	82	85.714	Maylandia_zebra
ENSSFOG00015020732	rab42a	100	84.862	ENSMMOG00000014358	rab42a	100	84.862	Mola_mola
ENSSFOG00015020732	rab42a	100	85.780	ENSNBRG00000021487	rab42a	82	85.780	Neolamprologus_brichardi
ENSSFOG00015020732	rab42a	100	84.862	ENSORLG00000022335	rab42a	100	84.862	Oryzias_latipes
ENSSFOG00015020732	rab42a	100	84.862	ENSORLG00020013895	rab42a	100	84.862	Oryzias_latipes_hni
ENSSFOG00015020732	rab42a	100	84.862	ENSORLG00015004273	rab42a	100	84.862	Oryzias_latipes_hsok
ENSSFOG00015020732	rab42a	100	84.862	ENSOMEG00000020418	rab42a	100	84.862	Oryzias_melastigma
ENSSFOG00015020732	rab42a	100	79.812	ENSPKIG00000021215	-	100	79.812	Paramormyrops_kingsleyae
ENSSFOG00015020732	rab42a	99	49.057	ENSPKIG00000015234	-	99	49.057	Paramormyrops_kingsleyae
ENSSFOG00015020732	rab42a	100	84.038	ENSPMGG00000024112	rab42a	97	84.038	Periophthalmus_magnuspinnatus
ENSSFOG00015020732	rab42a	100	83.486	ENSPFOG00000004838	rab42a	82	83.486	Poecilia_formosa
ENSSFOG00015020732	rab42a	100	83.486	ENSPLAG00000005628	rab42a	100	83.486	Poecilia_latipinna
ENSSFOG00015020732	rab42a	100	83.486	ENSPMEG00000019497	rab42a	100	83.486	Poecilia_mexicana
ENSSFOG00015020732	rab42a	100	83.486	ENSPREG00000013962	rab42a	100	83.486	Poecilia_reticulata
ENSSFOG00015020732	rab42a	100	85.714	ENSPNYG00000010325	rab42a	82	85.714	Pundamilia_nyererei
ENSSFOG00015020732	rab42a	100	89.202	ENSPNAG00000016567	rab42a	100	89.202	Pygocentrus_nattereri
ENSSFOG00015020732	rab42a	100	83.028	ENSSMAG00000020311	rab42a	100	83.028	Scophthalmus_maximus
ENSSFOG00015020732	rab42a	100	84.404	ENSSDUG00000011851	rab42a	100	84.404	Seriola_dumerili
ENSSFOG00015020732	rab42a	100	84.404	ENSSLDG00000020354	rab42a	100	84.404	Seriola_lalandi_dorsalis
ENSSFOG00015020732	rab42a	100	84.862	ENSSPAG00000016167	rab42a	100	85.321	Stegastes_partitus
ENSSFOG00015020732	rab42a	100	85.321	ENSTRUG00000010224	rab42a	100	85.321	Takifugu_rubripes
ENSSFOG00015020732	rab42a	100	83.945	ENSXCOG00000003428	rab42a	100	83.945	Xiphophorus_couchianus
ENSSFOG00015020732	rab42a	100	83.945	ENSXMAG00000028376	rab42a	100	83.945	Xiphophorus_maculatus