EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSFOG00015020844 (Gene tree)
Gene ID
108923446
Gene Symbol
trnt1
Alias
zgc:86645
Full Name
tRNA nucleotidyl transferase 1
Gene Type
protein_coding
Species
Scleropages_formosus
Status
putative
Strand
Minus strand
Length
7006 bases
Position
chrKV410824.1:6322940-6329945
Accession
108923446
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSFOP00015032608PolyA_polPF01743.201.4e-3311
ENSSFOP00015032600PolyA_polPF01743.201.5e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSFOT00015032964-2965XM_018734189ENSSFOP00015032600453 (aa)XP_018589705A0A1W4YMN8
ENSSFOT00015032972-2968XM_018734191ENSSFOP00015032608432 (aa)XP_018589707A0A1W4YDS7
Gene Model
Click here to download ENSSFOG00015020844's gene model file
Pathways
Pathway IDPathway NameSource
sfm03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020844's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSFOG00015020844trnt19470.864ENSG00000072756TRNT19967.742Homo_sapiens
ENSSFOG00015020844trnt19972.028ENSAPOG00000013687trnt19972.028Acanthochromis_polyacanthus
ENSSFOG00015020844trnt19967.907ENSAMEG00000014520TRNT19967.431Ailuropoda_melanoleuca
ENSSFOG00015020844trnt19975.058ENSACIG00000021706trnt19975.058Amphilophus_citrinellus
ENSSFOG00015020844trnt19972.960ENSAOCG00000024612trnt19972.960Amphiprion_ocellaris
ENSSFOG00015020844trnt19665.783ENSAPEG00000022627trnt19665.468Amphiprion_percula
ENSSFOG00015020844trnt19378.607ENSATEG00000008928trnt19978.607Anabas_testudineus
ENSSFOG00015020844trnt19369.250ENSAPLG00000004258TRNT19969.250Anas_platyrhynchos
ENSSFOG00015020844trnt19667.952ENSACAG00000005657TRNT19567.952Anolis_carolinensis
ENSSFOG00015020844trnt19470.370ENSANAG00000024802TRNT19967.281Aotus_nancymaae
ENSSFOG00015020844trnt19974.126ENSACLG00000022227trnt19974.126Astatotilapia_calliptera
ENSSFOG00015020844trnt110076.852ENSAMXG00000003960trnt19976.852Astyanax_mexicanus
ENSSFOG00015020844trnt19967.290ENSBTAG00000019534TRNT19966.820Bos_taurus
ENSSFOG00015020844trnt19343.341WBGene00010089hpo-319443.341Caenorhabditis_elegans
ENSSFOG00015020844trnt19470.617ENSCJAG00000015466TRNT19967.512Callithrix_jacchus
ENSSFOG00015020844trnt19471.358ENSCAFG00000005985TRNT19968.433Canis_familiaris
ENSSFOG00015020844trnt19471.358ENSCAFG00020014746TRNT19968.433Canis_lupus_dingo
ENSSFOG00015020844trnt19967.757ENSCHIG00000007030TRNT19967.512Capra_hircus
ENSSFOG00015020844trnt19471.111ENSTSYG00000013390TRNT19371.111Carlito_syrichta
ENSSFOG00015020844trnt17761.677ENSCAPG00000006891TRNT19361.677Cavia_aperea
ENSSFOG00015020844trnt19967.523ENSCPOG00000007849TRNT19867.523Cavia_porcellus
ENSSFOG00015020844trnt19171.139ENSCCAG00000002919TRNT19870.918Cebus_capucinus
ENSSFOG00015020844trnt19968.605ENSCATG00000031985TRNT19868.119Cercocebus_atys
ENSSFOG00015020844trnt19968.224ENSCLAG00000005186TRNT19868.224Chinchilla_lanigera
ENSSFOG00015020844trnt19968.925ENSCSAG00000011052TRNT19968.433Chlorocebus_sabaeus
ENSSFOG00015020844trnt18470.854ENSCHOG00000005712TRNT18270.854Choloepus_hoffmanni
ENSSFOG00015020844trnt19967.816ENSCPBG00000017636TRNT19967.816Chrysemys_picta_bellii
ENSSFOG00015020844trnt19342.079ENSCING00000007069-9942.079Ciona_intestinalis
ENSSFOG00015020844trnt19343.176ENSCSAVG00000007494-9543.176Ciona_savignyi
ENSSFOG00015020844trnt19968.925ENSCANG00000039030TRNT19968.433Colobus_angolensis_palliatus
ENSSFOG00015020844trnt19471.499ENSCGRG00001009998Trnt19471.499Cricetulus_griseus_chok1gshd
ENSSFOG00015020844trnt19471.499ENSCGRG00000013410Trnt19471.499Cricetulus_griseus_crigri
ENSSFOG00015020844trnt19973.427ENSCSEG00000008157trnt19973.427Cynoglossus_semilaevis
ENSSFOG00015020844trnt19477.206ENSCVAG00000019770trnt19677.206Cyprinodon_variegatus
ENSSFOG00015020844trnt19977.049ENSDARG00000075297trnt19977.049Danio_rerio
ENSSFOG00015020844trnt19472.099ENSDNOG00000008837TRNT19372.099Dasypus_novemcinctus
ENSSFOG00015020844trnt19470.762ENSDORG00000014035Trnt19470.762Dipodomys_ordii
ENSSFOG00015020844trnt19248.628FBgn0037369CG21008348.628Drosophila_melanogaster
ENSSFOG00015020844trnt15671.784ENSETEG00000018177TRNT19771.784Echinops_telfairi
ENSSFOG00015020844trnt19464.216ENSEBUG00000012779-9664.216Eptatretus_burgeri
ENSSFOG00015020844trnt19969.159ENSEASG00005003577TRNT19968.664Equus_asinus_asinus
ENSSFOG00015020844trnt19969.393ENSECAG00000014420TRNT19968.894Equus_caballus
ENSSFOG00015020844trnt19472.099ENSEEUG00000009567TRNT19372.099Erinaceus_europaeus
ENSSFOG00015020844trnt19975.870ENSELUG00000003802trnt19975.870Esox_lucius
ENSSFOG00015020844trnt19968.605ENSFCAG00000026805TRNT19967.972Felis_catus
ENSSFOG00015020844trnt18872.632ENSFALG00000013539TRNT19972.632Ficedula_albicollis
ENSSFOG00015020844trnt19470.370ENSFDAG00000018412TRNT19370.370Fukomys_damarensis
ENSSFOG00015020844trnt19972.960ENSFHEG00000019294trnt19972.960Fundulus_heteroclitus
ENSSFOG00015020844trnt19476.167ENSGMOG00000007460trnt19676.167Gadus_morhua
ENSSFOG00015020844trnt19966.979ENSGALG00000017368TRNT19966.979Gallus_gallus
ENSSFOG00015020844trnt19975.291ENSGAFG00000008647trnt19975.291Gambusia_affinis
ENSSFOG00015020844trnt19972.261ENSGACG00000011903trnt19972.600Gasterosteus_aculeatus
ENSSFOG00015020844trnt19968.192ENSGAGG00000020942TRNT19968.192Gopherus_agassizii
ENSSFOG00015020844trnt19471.111ENSGGOG00000015286TRNT19371.111Gorilla_gorilla
ENSSFOG00015020844trnt19974.359ENSHBUG00000002797trnt19974.359Haplochromis_burtoni
ENSSFOG00015020844trnt19366.418ENSHGLG00000000221-9366.418Heterocephalus_glaber_female
ENSSFOG00015020844trnt19470.270ENSHGLG00000003649TRNT19470.270Heterocephalus_glaber_female
ENSSFOG00015020844trnt19469.287ENSHGLG00100016421TRNT19469.287Heterocephalus_glaber_male
ENSSFOG00015020844trnt19972.261ENSHCOG00000010618trnt19972.261Hippocampus_comes
ENSSFOG00015020844trnt19975.174ENSIPUG00000000971trnt19975.174Ictalurus_punctatus
ENSSFOG00015020844trnt19470.025ENSSTOG00000000150TRNT18678.212Ictidomys_tridecemlineatus
ENSSFOG00015020844trnt19968.298ENSJJAG00000018561Trnt19868.298Jaculus_jaculus
ENSSFOG00015020844trnt19974.359ENSKMAG00000011307trnt19974.359Kryptolebias_marmoratus
ENSSFOG00015020844trnt19669.157ENSLBEG00000019457trnt19769.157Labrus_bergylta
ENSSFOG00015020844trnt19970.423ENSLACG00000013227TRNT19870.423Latimeria_chalumnae
ENSSFOG00015020844trnt110077.083ENSLOCG00000011105trnt19977.083Lepisosteus_oculatus
ENSSFOG00015020844trnt19471.111ENSLAFG00000023191TRNT19371.111Loxodonta_africana
ENSSFOG00015020844trnt19968.837ENSMFAG00000045113TRNT19868.349Macaca_fascicularis
ENSSFOG00015020844trnt19968.837ENSMMUG00000017983TRNT19868.349Macaca_mulatta
ENSSFOG00015020844trnt19968.837ENSMNEG00000037805TRNT19868.349Macaca_nemestrina
ENSSFOG00015020844trnt18872.178ENSMLEG00000033671TRNT19972.178Mandrillus_leucophaeus
ENSSFOG00015020844trnt19974.359ENSMAMG00000023401trnt19974.359Mastacembelus_armatus
ENSSFOG00015020844trnt19974.126ENSMZEG00005009141trnt19974.126Maylandia_zebra
ENSSFOG00015020844trnt17368.354ENSMGAG00000009971TRNT19868.354Meleagris_gallopavo
ENSSFOG00015020844trnt19471.499ENSMAUG00000020707Trnt19471.499Mesocricetus_auratus
ENSSFOG00015020844trnt19471.007ENSMICG00000016615TRNT19471.007Microcebus_murinus
ENSSFOG00015020844trnt19471.499ENSMOCG00000004539Trnt19471.499Microtus_ochrogaster
ENSSFOG00015020844trnt19972.261ENSMMOG00000010742trnt19972.261Mola_mola
ENSSFOG00015020844trnt19469.779ENSMODG00000004368TRNT19469.779Monodelphis_domestica
ENSSFOG00015020844trnt19971.329ENSMALG00000008376trnt19971.329Monopterus_albus
ENSSFOG00015020844trnt19471.499MGP_CAROLIEiJ_G0028698Trnt19471.499Mus_caroli
ENSSFOG00015020844trnt19471.007ENSMUSG00000013736Trnt19471.007Mus_musculus
ENSSFOG00015020844trnt19471.990MGP_PahariEiJ_G0022449Trnt18879.888Mus_pahari
ENSSFOG00015020844trnt19471.253MGP_SPRETEiJ_G0029726Trnt19471.253Mus_spretus
ENSSFOG00015020844trnt19768.720ENSMPUG00000017017TRNT19768.720Mustela_putorius_furo
ENSSFOG00015020844trnt18972.846ENSMLUG00000011864TRNT19972.846Myotis_lucifugus
ENSSFOG00015020844trnt19470.516ENSNGAG00000000537Trnt19470.516Nannospalax_galili
ENSSFOG00015020844trnt18174.571ENSNBRG00000023606trnt19974.571Neolamprologus_brichardi
ENSSFOG00015020844trnt19471.358ENSNLEG00000003226TRNT19968.203Nomascus_leucogenys
ENSSFOG00015020844trnt19966.901ENSMEUG00000004684TRNT19766.901Notamacropus_eugenii
ENSSFOG00015020844trnt18869.029ENSOPRG00000015067TRNT19969.029Ochotona_princeps
ENSSFOG00015020844trnt19470.617ENSODEG00000007597TRNT19370.617Octodon_degus
ENSSFOG00015020844trnt19975.058ENSONIG00000020273trnt19974.365Oreochromis_niloticus
ENSSFOG00015020844trnt19467.654ENSOANG00000007514TRNT19467.654Ornithorhynchus_anatinus
ENSSFOG00015020844trnt19968.925ENSOCUG00000008580TRNT19968.433Oryctolagus_cuniculus
ENSSFOG00015020844trnt19971.562ENSORLG00000003165trnt19971.562Oryzias_latipes
ENSSFOG00015020844trnt19971.795ENSORLG00020022060trnt19971.795Oryzias_latipes_hni
ENSSFOG00015020844trnt19971.329ENSORLG00015018915trnt19971.329Oryzias_latipes_hsok
ENSSFOG00015020844trnt19570.874ENSOMEG00000003331trnt19771.394Oryzias_melastigma
ENSSFOG00015020844trnt19967.757ENSOARG00000008631TRNT19967.512Ovis_aries
ENSSFOG00015020844trnt19470.864ENSPPAG00000043566TRNT19370.864Pan_paniscus
ENSSFOG00015020844trnt19968.692ENSPPRG00000001327TRNT19968.203Panthera_pardus
ENSSFOG00015020844trnt19968.692ENSPTIG00000011448TRNT19968.203Panthera_tigris_altaica
ENSSFOG00015020844trnt19470.864ENSPTRG00000014564TRNT19370.864Pan_troglodytes
ENSSFOG00015020844trnt19968.605ENSPANG00000025944TRNT19868.119Papio_anubis
ENSSFOG00015020844trnt19979.582ENSPKIG00000020015trnt19979.582Paramormyrops_kingsleyae
ENSSFOG00015020844trnt19171.066ENSPSIG00000017356TRNT19972.346Pelodiscus_sinensis
ENSSFOG00015020844trnt19473.839ENSPMGG00000008888trnt19970.670Periophthalmus_magnuspinnatus
ENSSFOG00015020844trnt19471.253ENSPEMG00000019845Trnt19471.253Peromyscus_maniculatus_bairdii
ENSSFOG00015020844trnt19470.270ENSPCIG00000030436TRNT19470.270Phascolarctos_cinereus
ENSSFOG00015020844trnt19477.206ENSPFOG00000006194trnt19677.206Poecilia_formosa
ENSSFOG00015020844trnt19477.206ENSPLAG00000015623trnt19977.612Poecilia_latipinna
ENSSFOG00015020844trnt19974.592ENSPMEG00000012216trnt19977.612Poecilia_mexicana
ENSSFOG00015020844trnt19974.126ENSPREG00000021470trnt19974.126Poecilia_reticulata
ENSSFOG00015020844trnt19470.516ENSPPYG00000013702TRNT19967.742Pongo_abelii
ENSSFOG00015020844trnt18873.228ENSPCAG00000001951TRNT19973.228Procavia_capensis
ENSSFOG00015020844trnt19471.852ENSPCOG00000022228TRNT19371.852Propithecus_coquereli
ENSSFOG00015020844trnt18872.178ENSPVAG00000008784TRNT19972.178Pteropus_vampyrus
ENSSFOG00015020844trnt19973.893ENSPNYG00000003120trnt19973.893Pundamilia_nyererei
ENSSFOG00015020844trnt19977.262ENSPNAG00000000565trnt19977.262Pygocentrus_nattereri
ENSSFOG00015020844trnt19471.744ENSRNOG00000006432Trnt19471.744Rattus_norvegicus
ENSSFOG00015020844trnt19968.224ENSRBIG00000042632TRNT19967.742Rhinopithecus_bieti
ENSSFOG00015020844trnt19968.692ENSRROG00000036866TRNT19968.203Rhinopithecus_roxellana
ENSSFOG00015020844trnt19470.617ENSSBOG00000021208TRNT19967.512Saimiri_boliviensis_boliviensis
ENSSFOG00015020844trnt19469.877ENSSHAG00000018861TRNT19369.877Sarcophilus_harrisii
ENSSFOG00015020844trnt19974.592ENSSMAG00000015432trnt19874.142Scophthalmus_maximus
ENSSFOG00015020844trnt19974.126ENSSDUG00000012320trnt19974.126Seriola_dumerili
ENSSFOG00015020844trnt19974.126ENSSLDG00000009325trnt19974.126Seriola_lalandi_dorsalis
ENSSFOG00015020844trnt15673.444ENSSLDG00000016463-9173.640Seriola_lalandi_dorsalis
ENSSFOG00015020844trnt18973.177ENSSPUG00000014153TRNT110073.177Sphenodon_punctatus
ENSSFOG00015020844trnt19972.600ENSSPAG00000021005trnt19972.600Stegastes_partitus
ENSSFOG00015020844trnt19968.458ENSSSCG00000011529TRNT19968.065Sus_scrofa
ENSSFOG00015020844trnt19470.443ENSTGUG00000010192TRNT110070.443Taeniopygia_guttata
ENSSFOG00015020844trnt19974.884ENSTRUG00000001088trnt19974.884Takifugu_rubripes
ENSSFOG00015020844trnt19975.870ENSTNIG00000007363trnt19875.870Tetraodon_nigroviridis
ENSSFOG00015020844trnt16158.333ENSTBEG00000006367TRNT18658.333Tupaia_belangeri
ENSSFOG00015020844trnt19967.991ENSTTRG00000007803TRNT19967.512Tursiops_truncatus
ENSSFOG00015020844trnt19967.898ENSUAMG00000022574TRNT19967.426Ursus_americanus
ENSSFOG00015020844trnt19967.667ENSUMAG00000024092TRNT19967.198Ursus_maritimus
ENSSFOG00015020844trnt19471.358ENSVVUG00000012810TRNT19968.433Vulpes_vulpes
ENSSFOG00015020844trnt19465.281ENSXETG00000025091trnt19965.423Xenopus_tropicalis
ENSSFOG00015020844trnt19974.592ENSXCOG00000010150trnt19974.592Xiphophorus_couchianus
ENSSFOG00015020844trnt19975.058ENSXMAG00000002227trnt19975.058Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us