EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020846 (Gene tree)
Gene ID: 108925973
Gene Symbol: si:dkey-240h12.4
Alias: -
Full Name: death-associated protein kinase 2-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6837 bases
Position: chrKV410779.1:34140-40976
Accession: 108925973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032646	RIO1	PF01163.22	5.1e-05	1	1
ENSSFOP00015032623	RIO1	PF01163.22	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015032987	-	2688	XM_018738377	ENSSFOP00015032623	361 (aa)	XP_018593893	A0A1W4YZN2
ENSSFOT00015033010	-	1077	-	ENSSFOP00015032646	358 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015020846's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020846	si:dkey-240h12.4	88	36.991	ENSSFOG00015019005	camk1	82	36.991
ENSSFOG00015020846	si:dkey-240h12.4	88	37.931	ENSSFOG00015021178	camk1a	84	37.931
ENSSFOG00015020846	si:dkey-240h12.4	74	34.572	ENSSFOG00015018163	-	59	39.394
ENSSFOG00015020846	si:dkey-240h12.4	81	30.421	ENSSFOG00015005989	rps6ka4	78	30.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020846	si:dkey-240h12.4	66	69.583	ENSACAG00000005337	-	97	69.048	Anolis_carolinensis
ENSSFOG00015020846	si:dkey-240h12.4	100	80.609	ENSAMXG00000035647	si:dkey-240h12.4	97	80.286	Astyanax_mexicanus
ENSSFOG00015020846	si:dkey-240h12.4	97	79.714	ENSDARG00000034210	si:dkey-240h12.4	97	79.714	Danio_rerio
ENSSFOG00015020846	si:dkey-240h12.4	52	67.725	ENSFHEG00000017947	si:dkey-240h12.4	94	67.725	Fundulus_heteroclitus
ENSSFOG00015020846	si:dkey-240h12.4	97	74.286	ENSLBEG00000000182	-	97	74.286	Labrus_bergylta
ENSSFOG00015020846	si:dkey-240h12.4	100	64.543	ENSLACG00000015056	si:dkey-240h12.4	96	64.286	Latimeria_chalumnae
ENSSFOG00015020846	si:dkey-240h12.4	97	83.761	ENSPKIG00000015179	si:dkey-240h12.4	97	84.241	Paramormyrops_kingsleyae
ENSSFOG00015020846	si:dkey-240h12.4	97	72.286	ENSPFOG00000016522	si:dkey-240h12.4	97	72.286	Poecilia_formosa
ENSSFOG00015020846	si:dkey-240h12.4	86	72.436	ENSPLAG00000002519	si:dkey-240h12.4	99	72.436	Poecilia_latipinna
ENSSFOG00015020846	si:dkey-240h12.4	100	80.332	ENSPNAG00000010456	-	97	80.000	Pygocentrus_nattereri
ENSSFOG00015020846	si:dkey-240h12.4	94	54.144	ENSSPUG00000001082	-	86	53.561	Sphenodon_punctatus