EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015020859 (Gene tree)
Gene ID: 108926412
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 7678 bases
Position: chrKV410853.1:692715-700392
Accession: 108926412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032661	PRP1_N	PF06424.12	1.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033025	-	3510	XM_018739077	ENSSFOP00015032661	930 (aa)	XP_018594593	-

Gene Model

Click here to download ENSSFOG00015020859's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020859's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020859	prpf6	100	93.985	ENSG00000101161	PRPF6	99	93.555	Homo_sapiens
ENSSFOG00015020859	prpf6	100	95.376	ENSAPOG00000010395	prpf6	95	95.376	Acanthochromis_polyacanthus
ENSSFOG00015020859	prpf6	99	94.073	ENSAMEG00000001916	PRPF6	98	93.642	Ailuropoda_melanoleuca
ENSSFOG00015020859	prpf6	100	95.484	ENSACIG00000019862	prpf6	95	95.484	Amphilophus_citrinellus
ENSSFOG00015020859	prpf6	100	95.484	ENSAOCG00000012988	prpf6	95	95.484	Amphiprion_ocellaris
ENSSFOG00015020859	prpf6	100	88.172	ENSAPEG00000008301	prpf6	99	88.817	Amphiprion_percula
ENSSFOG00015020859	prpf6	100	94.731	ENSATEG00000005581	prpf6	95	95.161	Anabas_testudineus
ENSSFOG00015020859	prpf6	100	94.952	ENSACAG00000006464	PRPF6	94	94.522	Anolis_carolinensis
ENSSFOG00015020859	prpf6	100	93.985	ENSANAG00000012661	PRPF6	99	94.517	Aotus_nancymaae
ENSSFOG00015020859	prpf6	100	95.376	ENSACLG00000025875	prpf6	95	95.376	Astatotilapia_calliptera
ENSSFOG00015020859	prpf6	100	95.269	ENSAMXG00000001929	prpf6	95	95.699	Astyanax_mexicanus
ENSSFOG00015020859	prpf6	100	94.737	ENSBTAG00000011656	PRPF6	99	94.307	Bos_taurus
ENSSFOG00015020859	prpf6	100	93.985	ENSCJAG00000010616	PRPF6	99	93.555	Callithrix_jacchus
ENSSFOG00015020859	prpf6	100	94.737	ENSCAFG00000013165	PRPF6	99	94.307	Canis_familiaris
ENSSFOG00015020859	prpf6	100	94.737	ENSCAFG00020002050	PRPF6	99	94.307	Canis_lupus_dingo
ENSSFOG00015020859	prpf6	100	94.737	ENSCHIG00000018187	PRPF6	99	94.307	Capra_hircus
ENSSFOG00015020859	prpf6	100	94.415	ENSTSYG00000007814	PRPF6	99	93.985	Carlito_syrichta
ENSSFOG00015020859	prpf6	98	93.675	ENSCAPG00000015077	PRPF6	100	92.803	Cavia_aperea
ENSSFOG00015020859	prpf6	100	95.059	ENSCPOG00000007518	PRPF6	99	94.629	Cavia_porcellus
ENSSFOG00015020859	prpf6	100	90.870	ENSCCAG00000024564	PRPF6	99	90.440	Cebus_capucinus
ENSSFOG00015020859	prpf6	100	93.985	ENSCATG00000037473	PRPF6	99	93.555	Cercocebus_atys
ENSSFOG00015020859	prpf6	100	91.407	ENSCLAG00000003854	PRPF6	99	90.977	Chinchilla_lanigera
ENSSFOG00015020859	prpf6	100	89.434	ENSCSAG00000016742	PRPF6	99	89.007	Chlorocebus_sabaeus
ENSSFOG00015020859	prpf6	86	78.374	ENSCHOG00000003315	-	98	78.017	Choloepus_hoffmanni
ENSSFOG00015020859	prpf6	100	95.054	ENSCPBG00000013964	PRPF6	95	95.054	Chrysemys_picta_bellii
ENSSFOG00015020859	prpf6	99	73.825	ENSCING00000008817	-	98	73.825	Ciona_intestinalis
ENSSFOG00015020859	prpf6	100	93.878	ENSCANG00000038230	PRPF6	99	93.448	Colobus_angolensis_palliatus
ENSSFOG00015020859	prpf6	100	95.059	ENSCGRG00001022666	Prpf6	99	94.629	Cricetulus_griseus_chok1gshd
ENSSFOG00015020859	prpf6	100	89.247	ENSCSEG00000018561	prpf6	99	89.677	Cynoglossus_semilaevis
ENSSFOG00015020859	prpf6	100	94.086	ENSCVAG00000010550	prpf6	95	94.516	Cyprinodon_variegatus
ENSSFOG00015020859	prpf6	100	94.731	ENSDARG00000091367	prpf6	98	95.161	Danio_rerio
ENSSFOG00015020859	prpf6	100	94.522	ENSDNOG00000040544	PRPF6	99	94.522	Dasypus_novemcinctus
ENSSFOG00015020859	prpf6	92	94.159	ENSDORG00000005406	Prpf6	100	94.159	Dipodomys_ordii
ENSSFOG00015020859	prpf6	99	71.598	FBgn0036828	CG6841	98	71.598	Drosophila_melanogaster
ENSSFOG00015020859	prpf6	85	92.836	ENSETEG00000004447	PRPF6	84	92.836	Echinops_telfairi
ENSSFOG00015020859	prpf6	100	87.366	ENSEBUG00000008835	prpf6	99	87.152	Eptatretus_burgeri
ENSSFOG00015020859	prpf6	100	94.952	ENSEASG00005023115	PRPF6	99	94.522	Equus_asinus_asinus
ENSSFOG00015020859	prpf6	100	90.655	ENSECAG00000013983	PRPF6	99	90.226	Equus_caballus
ENSSFOG00015020859	prpf6	88	90.762	ENSEEUG00000000180	PRPF6	78	90.762	Erinaceus_europaeus
ENSSFOG00015020859	prpf6	100	94.516	ENSELUG00000001945	prpf6	92	94.516	Esox_lucius
ENSSFOG00015020859	prpf6	100	94.844	ENSFCAG00000001183	PRPF6	99	94.415	Felis_catus
ENSSFOG00015020859	prpf6	100	95.166	ENSFALG00000010326	-	96	95.166	Ficedula_albicollis
ENSSFOG00015020859	prpf6	100	88.495	ENSFALG00000006046	-	96	88.495	Ficedula_albicollis
ENSSFOG00015020859	prpf6	99	94.880	ENSFDAG00000006451	PRPF6	100	94.331	Fukomys_damarensis
ENSSFOG00015020859	prpf6	100	95.269	ENSFHEG00000000560	prpf6	95	95.269	Fundulus_heteroclitus
ENSSFOG00015020859	prpf6	100	93.011	ENSGMOG00000015622	prpf6	98	93.011	Gadus_morhua
ENSSFOG00015020859	prpf6	100	94.952	ENSGALG00000006001	PRPF6	99	94.952	Gallus_gallus
ENSSFOG00015020859	prpf6	100	89.677	ENSGAFG00000021109	prpf6	95	90.108	Gambusia_affinis
ENSSFOG00015020859	prpf6	100	93.548	ENSGACG00000002576	prpf6	98	93.548	Gasterosteus_aculeatus
ENSSFOG00015020859	prpf6	100	94.946	ENSGAGG00000008653	PRPF6	95	94.946	Gopherus_agassizii
ENSSFOG00015020859	prpf6	100	93.985	ENSGGOG00000016876	PRPF6	99	93.555	Gorilla_gorilla
ENSSFOG00015020859	prpf6	100	95.376	ENSHBUG00000004496	prpf6	95	95.376	Haplochromis_burtoni
ENSSFOG00015020859	prpf6	100	94.952	ENSHGLG00000009222	PRPF6	99	94.522	Heterocephalus_glaber_female
ENSSFOG00015020859	prpf6	98	94.875	ENSHGLG00100016600	PRPF6	100	94.438	Heterocephalus_glaber_male
ENSSFOG00015020859	prpf6	100	93.548	ENSHCOG00000011513	prpf6	95	93.978	Hippocampus_comes
ENSSFOG00015020859	prpf6	100	95.914	ENSIPUG00000004912	prpf6	95	95.914	Ictalurus_punctatus
ENSSFOG00015020859	prpf6	100	92.167	ENSSTOG00000002922	PRPF6	99	91.524	Ictidomys_tridecemlineatus
ENSSFOG00015020859	prpf6	100	95.059	ENSJJAG00000000836	Prpf6	99	94.629	Jaculus_jaculus
ENSSFOG00015020859	prpf6	100	94.516	ENSKMAG00000017800	prpf6	95	94.946	Kryptolebias_marmoratus
ENSSFOG00015020859	prpf6	100	94.409	ENSLBEG00000012582	prpf6	95	94.409	Labrus_bergylta
ENSSFOG00015020859	prpf6	100	97.204	ENSLOCG00000004827	prpf6	95	95.806	Lepisosteus_oculatus
ENSSFOG00015020859	prpf6	100	94.415	ENSLAFG00000005272	PRPF6	99	93.985	Loxodonta_africana
ENSSFOG00015020859	prpf6	100	93.878	ENSMFAG00000037542	PRPF6	96	96.460	Macaca_fascicularis
ENSSFOG00015020859	prpf6	92	96.187	ENSMMUG00000015558	PRPF6	98	95.494	Macaca_mulatta
ENSSFOG00015020859	prpf6	100	80.193	ENSMNEG00000045555	PRPF6	99	79.764	Macaca_nemestrina
ENSSFOG00015020859	prpf6	100	95.376	ENSMAMG00000010718	prpf6	95	95.386	Mastacembelus_armatus
ENSSFOG00015020859	prpf6	100	94.415	ENSMZEG00005015261	-	98	94.844	Maylandia_zebra
ENSSFOG00015020859	prpf6	95	94.779	ENSMZEG00005026539	prpf6	100	95.233	Maylandia_zebra
ENSSFOG00015020859	prpf6	98	95.093	ENSMGAG00000006634	PRPF6	100	95.093	Meleagris_gallopavo
ENSSFOG00015020859	prpf6	100	95.059	ENSMAUG00000013969	Prpf6	99	94.629	Mesocricetus_auratus
ENSSFOG00015020859	prpf6	88	93.796	ENSMICG00000017793	PRPF6	98	93.711	Microcebus_murinus
ENSSFOG00015020859	prpf6	100	95.166	ENSMOCG00000001701	Prpf6	99	94.737	Microtus_ochrogaster
ENSSFOG00015020859	prpf6	100	94.194	ENSMMOG00000020419	prpf6	99	94.624	Mola_mola
ENSSFOG00015020859	prpf6	97	95.755	ENSMODG00000017051	PRPF6	98	95.256	Monodelphis_domestica
ENSSFOG00015020859	prpf6	100	94.839	ENSMALG00000000089	prpf6	100	94.839	Monopterus_albus
ENSSFOG00015020859	prpf6	100	88.507	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSSFOG00015020859	prpf6	100	95.059	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSSFOG00015020859	prpf6	100	95.059	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSSFOG00015020859	prpf6	100	95.059	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSSFOG00015020859	prpf6	92	94.624	ENSMPUG00000008673	PRPF6	99	94.146	Mustela_putorius_furo
ENSSFOG00015020859	prpf6	100	95.166	ENSNGAG00000003365	Prpf6	99	94.737	Nannospalax_galili
ENSSFOG00015020859	prpf6	100	95.484	ENSNBRG00000015025	prpf6	95	95.484	Neolamprologus_brichardi
ENSSFOG00015020859	prpf6	100	93.878	ENSNLEG00000010208	PRPF6	99	93.448	Nomascus_leucogenys
ENSSFOG00015020859	prpf6	100	85.801	ENSMEUG00000009824	-	89	85.573	Notamacropus_eugenii
ENSSFOG00015020859	prpf6	100	89.044	ENSODEG00000004841	PRPF6	99	88.614	Octodon_degus
ENSSFOG00015020859	prpf6	100	95.376	ENSONIG00000017406	prpf6	95	95.376	Oreochromis_niloticus
ENSSFOG00015020859	prpf6	100	95.059	ENSOANG00000004920	PRPF6	99	94.629	Ornithorhynchus_anatinus
ENSSFOG00015020859	prpf6	100	93.233	ENSOCUG00000014151	PRPF6	99	92.803	Oryctolagus_cuniculus
ENSSFOG00015020859	prpf6	100	93.978	ENSORLG00000009592	prpf6	95	93.978	Oryzias_latipes
ENSSFOG00015020859	prpf6	100	94.086	ENSORLG00020001458	prpf6	95	94.086	Oryzias_latipes_hni
ENSSFOG00015020859	prpf6	100	94.086	ENSORLG00015018762	prpf6	95	94.086	Oryzias_latipes_hsok
ENSSFOG00015020859	prpf6	100	93.978	ENSOMEG00000012174	prpf6	95	94.409	Oryzias_melastigma
ENSSFOG00015020859	prpf6	100	87.661	ENSOGAG00000007573	PRPF6	99	87.017	Otolemur_garnettii
ENSSFOG00015020859	prpf6	100	94.307	ENSOARG00000008776	PRPF6	98	93.878	Ovis_aries
ENSSFOG00015020859	prpf6	100	93.985	ENSPPAG00000008686	PRPF6	99	93.555	Pan_paniscus
ENSSFOG00015020859	prpf6	100	94.844	ENSPPRG00000008497	PRPF6	99	94.415	Panthera_pardus
ENSSFOG00015020859	prpf6	98	94.766	ENSPTIG00000011184	PRPF6	97	94.329	Panthera_tigris_altaica
ENSSFOG00015020859	prpf6	100	93.985	ENSPTRG00000013765	PRPF6	99	93.555	Pan_troglodytes
ENSSFOG00015020859	prpf6	100	93.555	ENSPANG00000024135	PRPF6	99	93.126	Papio_anubis
ENSSFOG00015020859	prpf6	100	97.742	ENSPKIG00000005627	prpf6	98	97.742	Paramormyrops_kingsleyae
ENSSFOG00015020859	prpf6	95	94.785	ENSPSIG00000007717	PRPF6	100	94.331	Pelodiscus_sinensis
ENSSFOG00015020859	prpf6	100	92.589	ENSPMGG00000008925	prpf6	95	92.803	Periophthalmus_magnuspinnatus
ENSSFOG00015020859	prpf6	100	95.059	ENSPEMG00000016036	Prpf6	99	94.629	Peromyscus_maniculatus_bairdii
ENSSFOG00015020859	prpf6	100	87.661	ENSPMAG00000006144	prpf6	98	87.661	Petromyzon_marinus
ENSSFOG00015020859	prpf6	100	95.274	ENSPCIG00000017909	PRPF6	99	94.844	Phascolarctos_cinereus
ENSSFOG00015020859	prpf6	100	94.731	ENSPFOG00000006431	prpf6	95	95.161	Poecilia_formosa
ENSSFOG00015020859	prpf6	100	94.409	ENSPLAG00000005974	prpf6	95	94.839	Poecilia_latipinna
ENSSFOG00015020859	prpf6	100	94.624	ENSPMEG00000009977	prpf6	95	95.054	Poecilia_mexicana
ENSSFOG00015020859	prpf6	100	94.516	ENSPREG00000017993	prpf6	91	94.946	Poecilia_reticulata
ENSSFOG00015020859	prpf6	100	93.448	ENSPPYG00000011256	PRPF6	99	93.018	Pongo_abelii
ENSSFOG00015020859	prpf6	96	96.895	ENSPCAG00000006536	PRPF6	88	96.895	Procavia_capensis
ENSSFOG00015020859	prpf6	100	94.200	ENSPCOG00000016881	PRPF6	99	93.770	Propithecus_coquereli
ENSSFOG00015020859	prpf6	100	88.722	ENSPVAG00000014316	PRPF6	99	88.292	Pteropus_vampyrus
ENSSFOG00015020859	prpf6	100	76.907	ENSPNYG00000001939	prpf6	95	83.548	Pundamilia_nyererei
ENSSFOG00015020859	prpf6	100	95.269	ENSPNAG00000015606	prpf6	95	95.699	Pygocentrus_nattereri
ENSSFOG00015020859	prpf6	100	94.952	ENSRNOG00000051498	Prpf6	99	94.522	Rattus_norvegicus
ENSSFOG00015020859	prpf6	100	93.878	ENSRBIG00000043613	PRPF6	98	94.810	Rhinopithecus_bieti
ENSSFOG00015020859	prpf6	100	90.802	ENSRROG00000040969	PRPF6	98	94.810	Rhinopithecus_roxellana
ENSSFOG00015020859	prpf6	92	91.504	ENSSBOG00000020632	PRPF6	93	89.273	Saimiri_boliviensis_boliviensis
ENSSFOG00015020859	prpf6	100	95.274	ENSSHAG00000016810	PRPF6	99	94.844	Sarcophilus_harrisii
ENSSFOG00015020859	prpf6	100	94.301	ENSSMAG00000008112	prpf6	95	94.301	Scophthalmus_maximus
ENSSFOG00015020859	prpf6	100	95.376	ENSSDUG00000016142	prpf6	95	95.376	Seriola_dumerili
ENSSFOG00015020859	prpf6	100	95.376	ENSSLDG00000025283	prpf6	99	91.828	Seriola_lalandi_dorsalis
ENSSFOG00015020859	prpf6	95	93.311	ENSSPUG00000018260	PRPF6	100	92.857	Sphenodon_punctatus
ENSSFOG00015020859	prpf6	100	94.731	ENSSPAG00000015850	prpf6	95	95.161	Stegastes_partitus
ENSSFOG00015020859	prpf6	100	94.415	ENSSSCG00000029119	PRPF6	100	93.651	Sus_scrofa
ENSSFOG00015020859	prpf6	100	95.274	ENSTGUG00000007221	PRPF6	99	95.274	Taeniopygia_guttata
ENSSFOG00015020859	prpf6	100	94.301	ENSTRUG00000002920	prpf6	95	94.731	Takifugu_rubripes
ENSSFOG00015020859	prpf6	100	87.940	ENSTNIG00000017873	prpf6	99	88.367	Tetraodon_nigroviridis
ENSSFOG00015020859	prpf6	89	96.667	ENSTBEG00000005348	PRPF6	85	94.444	Tupaia_belangeri
ENSSFOG00015020859	prpf6	100	94.629	ENSTTRG00000013068	PRPF6	99	94.200	Tursiops_truncatus
ENSSFOG00015020859	prpf6	99	93.152	ENSUMAG00000021631	PRPF6	98	92.717	Ursus_maritimus
ENSSFOG00015020859	prpf6	100	94.737	ENSVVUG00000014948	PRPF6	99	94.307	Vulpes_vulpes
ENSSFOG00015020859	prpf6	100	94.194	ENSXETG00000012054	prpf6	96	94.194	Xenopus_tropicalis
ENSSFOG00015020859	prpf6	100	94.624	ENSXCOG00000008082	prpf6	95	95.054	Xiphophorus_couchianus
ENSSFOG00015020859	prpf6	100	94.624	ENSXMAG00000015581	prpf6	95	95.054	Xiphophorus_maculatus