EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020909 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 14792 bases
Position: chrKV411153.1:4288693-4303484
Accession: 108938029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032744	ResIII	PF04851.15	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033108	-	2265	XM_018758293	ENSSFOP00015032744	754 (aa)	XP_018613809	-

Gene Model

Click here to download ENSSFOG00015020909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020909	smarcad1a	100	66.667	ENSSFOG00015016814	smarcad1b	79	66.049
ENSSFOG00015020909	smarcad1a	69	37.665	ENSSFOG00015003649	chd1l	53	37.965
ENSSFOG00015020909	smarcad1a	68	35.018	ENSSFOG00015017895	hells	64	35.436
ENSSFOG00015020909	smarcad1a	64	30.137	ENSSFOG00015008483	rad54b	74	30.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020909	smarcad1a	100	57.772	ENSG00000163104	SMARCAD1	99	64.706	Homo_sapiens
ENSSFOG00015020909	smarcad1a	94	72.331	ENSAPOG00000011446	smarcad1a	66	72.331	Acanthochromis_polyacanthus
ENSSFOG00015020909	smarcad1a	100	57.642	ENSAMEG00000005844	SMARCAD1	74	57.642	Ailuropoda_melanoleuca
ENSSFOG00015020909	smarcad1a	89	71.746	ENSACIG00000018326	smarcad1a	93	71.704	Amphilophus_citrinellus
ENSSFOG00015020909	smarcad1a	94	72.051	ENSAOCG00000019762	smarcad1a	66	72.051	Amphiprion_ocellaris
ENSSFOG00015020909	smarcad1a	94	71.690	ENSAPEG00000003889	smarcad1a	66	71.690	Amphiprion_percula
ENSSFOG00015020909	smarcad1a	93	69.210	ENSATEG00000015608	smarcad1a	72	69.482	Anabas_testudineus
ENSSFOG00015020909	smarcad1a	100	59.610	ENSAPLG00000004630	SMARCAD1	80	59.481	Anas_platyrhynchos
ENSSFOG00015020909	smarcad1a	100	58.236	ENSACAG00000013554	SMARCAD1	75	58.236	Anolis_carolinensis
ENSSFOG00015020909	smarcad1a	100	57.642	ENSANAG00000020488	SMARCAD1	84	57.642	Aotus_nancymaae
ENSSFOG00015020909	smarcad1a	94	70.506	ENSACLG00000017063	smarcad1a	69	70.490	Astatotilapia_calliptera
ENSSFOG00015020909	smarcad1a	89	70.458	ENSAMXG00000015470	smarcad1a	98	68.317	Astyanax_mexicanus
ENSSFOG00015020909	smarcad1a	100	63.648	ENSAMXG00000019130	smarcad1b	84	63.903	Astyanax_mexicanus
ENSSFOG00015020909	smarcad1a	100	57.235	ENSBTAG00000017061	SMARCAD1	74	57.235	Bos_taurus
ENSSFOG00015020909	smarcad1a	83	41.038	WBGene00010845	M03C11.8	70	38.928	Caenorhabditis_elegans
ENSSFOG00015020909	smarcad1a	100	57.513	ENSCJAG00000006778	SMARCAD1	75	57.513	Callithrix_jacchus
ENSSFOG00015020909	smarcad1a	100	57.642	ENSCAFG00000010026	SMARCAD1	74	57.642	Canis_familiaris
ENSSFOG00015020909	smarcad1a	100	57.642	ENSCAFG00020003994	SMARCAD1	86	57.642	Canis_lupus_dingo
ENSSFOG00015020909	smarcad1a	100	57.642	ENSCHIG00000012905	SMARCAD1	74	57.642	Capra_hircus
ENSSFOG00015020909	smarcad1a	100	57.772	ENSTSYG00000002706	SMARCAD1	74	57.772	Carlito_syrichta
ENSSFOG00015020909	smarcad1a	98	52.752	ENSCAPG00000016744	SMARCAD1	80	52.752	Cavia_aperea
ENSSFOG00015020909	smarcad1a	100	57.717	ENSCPOG00000011398	SMARCAD1	74	57.717	Cavia_porcellus
ENSSFOG00015020909	smarcad1a	100	57.513	ENSCCAG00000022264	SMARCAD1	99	64.538	Cebus_capucinus
ENSSFOG00015020909	smarcad1a	100	57.642	ENSCATG00000035663	SMARCAD1	86	57.513	Cercocebus_atys
ENSSFOG00015020909	smarcad1a	100	57.642	ENSCSAG00000004186	SMARCAD1	91	57.513	Chlorocebus_sabaeus
ENSSFOG00015020909	smarcad1a	100	57.766	ENSCPBG00000013203	SMARCAD1	75	57.766	Chrysemys_picta_bellii
ENSSFOG00015020909	smarcad1a	87	49.776	ENSCING00000001688	-	99	49.776	Ciona_intestinalis
ENSSFOG00015020909	smarcad1a	100	57.772	ENSCANG00000003556	SMARCAD1	99	64.706	Colobus_angolensis_palliatus
ENSSFOG00015020909	smarcad1a	100	57.383	ENSCGRG00001015056	Smarcad1	75	57.383	Cricetulus_griseus_chok1gshd
ENSSFOG00015020909	smarcad1a	100	57.383	ENSCGRG00000014087	Smarcad1	75	57.383	Cricetulus_griseus_crigri
ENSSFOG00015020909	smarcad1a	94	68.627	ENSCSEG00000014419	-	70	68.627	Cynoglossus_semilaevis
ENSSFOG00015020909	smarcad1a	91	69.477	ENSCSEG00000017903	smarcad1a	64	69.477	Cynoglossus_semilaevis
ENSSFOG00015020909	smarcad1a	99	61.713	ENSDARG00000014041	smarcad1a	81	62.453	Danio_rerio
ENSSFOG00015020909	smarcad1a	100	57.180	ENSDNOG00000000806	-	74	57.180	Dasypus_novemcinctus
ENSSFOG00015020909	smarcad1a	100	57.902	ENSDORG00000012331	Smarcad1	75	57.902	Dipodomys_ordii
ENSSFOG00015020909	smarcad1a	85	44.343	FBgn0032157	Etl1	82	42.958	Drosophila_melanogaster
ENSSFOG00015020909	smarcad1a	81	46.785	ENSEBUG00000003969	smarcad1a	92	47.547	Eptatretus_burgeri
ENSSFOG00015020909	smarcad1a	100	57.642	ENSEASG00005012382	SMARCAD1	75	60.472	Equus_asinus_asinus
ENSSFOG00015020909	smarcad1a	100	57.642	ENSECAG00000011562	SMARCAD1	74	57.642	Equus_caballus
ENSSFOG00015020909	smarcad1a	98	63.316	ENSELUG00000019154	smarcad1b	77	63.411	Esox_lucius
ENSSFOG00015020909	smarcad1a	100	65.848	ENSELUG00000018535	smarcad1a	79	66.339	Esox_lucius
ENSSFOG00015020909	smarcad1a	100	57.439	ENSFCAG00000003958	SMARCAD1	99	64.538	Felis_catus
ENSSFOG00015020909	smarcad1a	100	59.173	ENSFALG00000006089	SMARCAD1	75	59.173	Ficedula_albicollis
ENSSFOG00015020909	smarcad1a	100	58.161	ENSFDAG00000017027	SMARCAD1	75	58.161	Fukomys_damarensis
ENSSFOG00015020909	smarcad1a	89	71.940	ENSFHEG00000012778	smarcad1a	63	71.033	Fundulus_heteroclitus
ENSSFOG00015020909	smarcad1a	100	67.060	ENSGMOG00000018995	smarcad1a	87	67.497	Gadus_morhua
ENSSFOG00015020909	smarcad1a	100	56.939	ENSGALG00000037339	SMARCAD1	92	56.939	Gallus_gallus
ENSSFOG00015020909	smarcad1a	84	74.485	ENSGAFG00000013498	smarcad1a	60	74.485	Gambusia_affinis
ENSSFOG00015020909	smarcad1a	100	67.539	ENSGACG00000007327	smarcad1a	86	67.979	Gasterosteus_aculeatus
ENSSFOG00015020909	smarcad1a	100	58.085	ENSGAGG00000008582	SMARCAD1	75	58.085	Gopherus_agassizii
ENSSFOG00015020909	smarcad1a	100	57.772	ENSGGOG00000023001	SMARCAD1	74	57.772	Gorilla_gorilla
ENSSFOG00015020909	smarcad1a	95	70.251	ENSHBUG00000011042	smarcad1a	67	70.251	Haplochromis_burtoni
ENSSFOG00015020909	smarcad1a	100	58.161	ENSHGLG00000005070	SMARCAD1	74	58.161	Heterocephalus_glaber_female
ENSSFOG00015020909	smarcad1a	100	58.161	ENSHGLG00100006812	SMARCAD1	74	58.161	Heterocephalus_glaber_male
ENSSFOG00015020909	smarcad1a	85	69.579	ENSHCOG00000007848	smarcad1a	67	63.514	Hippocampus_comes
ENSSFOG00015020909	smarcad1a	95	67.582	ENSIPUG00000000242	smarcad1a	74	67.857	Ictalurus_punctatus
ENSSFOG00015020909	smarcad1a	100	63.355	ENSIPUG00000022817	smarcad1b	82	63.543	Ictalurus_punctatus
ENSSFOG00015020909	smarcad1a	100	57.050	ENSSTOG00000001227	SMARCAD1	74	57.050	Ictidomys_tridecemlineatus
ENSSFOG00015020909	smarcad1a	100	57.847	ENSJJAG00000022342	Smarcad1	74	57.977	Jaculus_jaculus
ENSSFOG00015020909	smarcad1a	87	72.466	ENSKMAG00000021351	smarcad1a	64	70.360	Kryptolebias_marmoratus
ENSSFOG00015020909	smarcad1a	91	73.440	ENSLBEG00000008088	smarcad1a	67	71.369	Labrus_bergylta
ENSSFOG00015020909	smarcad1a	100	65.930	ENSLOCG00000012909	smarcad1a	78	66.230	Lepisosteus_oculatus
ENSSFOG00015020909	smarcad1a	100	55.959	ENSLAFG00000000040	SMARCAD1	74	55.959	Loxodonta_africana
ENSSFOG00015020909	smarcad1a	100	57.642	ENSMFAG00000042606	SMARCAD1	86	57.513	Macaca_fascicularis
ENSSFOG00015020909	smarcad1a	100	57.642	ENSMMUG00000022242	SMARCAD1	86	57.513	Macaca_mulatta
ENSSFOG00015020909	smarcad1a	100	57.642	ENSMNEG00000038117	SMARCAD1	99	64.706	Macaca_nemestrina
ENSSFOG00015020909	smarcad1a	100	57.642	ENSMLEG00000038333	SMARCAD1	99	64.706	Mandrillus_leucophaeus
ENSSFOG00015020909	smarcad1a	94	70.927	ENSMAMG00000000933	smarcad1a	67	70.927	Mastacembelus_armatus
ENSSFOG00015020909	smarcad1a	94	70.490	ENSMZEG00005005203	smarcad1a	69	70.490	Maylandia_zebra
ENSSFOG00015020909	smarcad1a	100	54.955	ENSMGAG00000005577	SMARCAD1	80	54.955	Meleagris_gallopavo
ENSSFOG00015020909	smarcad1a	100	57.847	ENSMAUG00000008417	Smarcad1	75	57.847	Mesocricetus_auratus
ENSSFOG00015020909	smarcad1a	100	57.439	ENSMICG00000009746	SMARCAD1	74	57.439	Microcebus_murinus
ENSSFOG00015020909	smarcad1a	100	57.403	ENSMOCG00000017142	Smarcad1	75	57.403	Microtus_ochrogaster
ENSSFOG00015020909	smarcad1a	91	72.543	ENSMMOG00000000275	smarcad1a	93	72.593	Mola_mola
ENSSFOG00015020909	smarcad1a	100	58.732	ENSMODG00000019268	SMARCAD1	74	58.732	Monodelphis_domestica
ENSSFOG00015020909	smarcad1a	100	57.662	MGP_CAROLIEiJ_G0028458	-	61	57.662	Mus_caroli
ENSSFOG00015020909	smarcad1a	100	57.662	ENSMUSG00000029920	Smarcad1	75	57.662	Mus_musculus
ENSSFOG00015020909	smarcad1a	100	57.403	MGP_PahariEiJ_G0022198	Smarcad1	75	57.403	Mus_pahari
ENSSFOG00015020909	smarcad1a	100	57.662	MGP_SPRETEiJ_G0029462	Smarcad1	75	57.662	Mus_spretus
ENSSFOG00015020909	smarcad1a	100	57.642	ENSMPUG00000002111	SMARCAD1	74	57.642	Mustela_putorius_furo
ENSSFOG00015020909	smarcad1a	100	56.921	ENSMLUG00000000425	SMARCAD1	75	56.921	Myotis_lucifugus
ENSSFOG00015020909	smarcad1a	100	57.827	ENSNGAG00000000810	Smarcad1	75	57.827	Nannospalax_galili
ENSSFOG00015020909	smarcad1a	89	71.620	ENSNBRG00000012749	smarcad1a	82	70.360	Neolamprologus_brichardi
ENSSFOG00015020909	smarcad1a	100	57.772	ENSNLEG00000014225	SMARCAD1	99	64.706	Nomascus_leucogenys
ENSSFOG00015020909	smarcad1a	100	57.847	ENSODEG00000004334	SMARCAD1	74	57.847	Octodon_degus
ENSSFOG00015020909	smarcad1a	85	74.534	ENSONIG00000015059	smarcad1a	78	67.017	Oreochromis_niloticus
ENSSFOG00015020909	smarcad1a	100	58.549	ENSOANG00000013764	SMARCAD1	93	58.763	Ornithorhynchus_anatinus
ENSSFOG00015020909	smarcad1a	100	57.180	ENSOCUG00000017283	SMARCAD1	75	57.254	Oryctolagus_cuniculus
ENSSFOG00015020909	smarcad1a	92	69.928	ENSORLG00000004869	smarcad1a	67	68.811	Oryzias_latipes
ENSSFOG00015020909	smarcad1a	92	69.928	ENSORLG00020020569	smarcad1a	67	68.811	Oryzias_latipes_hni
ENSSFOG00015020909	smarcad1a	92	69.928	ENSORLG00015009045	smarcad1a	67	68.671	Oryzias_latipes_hsok
ENSSFOG00015020909	smarcad1a	92	69.784	ENSOMEG00000023032	smarcad1a	66	69.784	Oryzias_melastigma
ENSSFOG00015020909	smarcad1a	100	57.050	ENSOGAG00000011444	SMARCAD1	75	57.050	Otolemur_garnettii
ENSSFOG00015020909	smarcad1a	100	57.642	ENSOARG00000017851	SMARCAD1	74	57.642	Ovis_aries
ENSSFOG00015020909	smarcad1a	100	57.772	ENSPPAG00000035715	SMARCAD1	74	57.772	Pan_paniscus
ENSSFOG00015020909	smarcad1a	100	57.439	ENSPPRG00000024756	SMARCAD1	99	64.538	Panthera_pardus
ENSSFOG00015020909	smarcad1a	100	57.161	ENSPTIG00000017868	SMARCAD1	74	57.161	Panthera_tigris_altaica
ENSSFOG00015020909	smarcad1a	100	57.772	ENSPTRG00000023126	SMARCAD1	99	64.706	Pan_troglodytes
ENSSFOG00015020909	smarcad1a	100	56.387	ENSPANG00000019757	SMARCAD1	74	56.387	Papio_anubis
ENSSFOG00015020909	smarcad1a	100	57.915	ENSPSIG00000010255	SMARCAD1	74	57.915	Pelodiscus_sinensis
ENSSFOG00015020909	smarcad1a	85	69.938	ENSPMGG00000010735	smarcad1a	97	67.398	Periophthalmus_magnuspinnatus
ENSSFOG00015020909	smarcad1a	99	51.245	ENSPEMG00000001854	Smarcad1	75	51.245	Peromyscus_maniculatus_bairdii
ENSSFOG00015020909	smarcad1a	99	50.702	ENSPMAG00000003516	smarcad1a	77	50.897	Petromyzon_marinus
ENSSFOG00015020909	smarcad1a	100	59.120	ENSPCIG00000008137	SMARCAD1	94	59.120	Phascolarctos_cinereus
ENSSFOG00015020909	smarcad1a	88	73.112	ENSPFOG00000019116	smarcad1a	63	71.739	Poecilia_formosa
ENSSFOG00015020909	smarcad1a	88	72.961	ENSPLAG00000000108	smarcad1a	63	71.594	Poecilia_latipinna
ENSSFOG00015020909	smarcad1a	88	73.112	ENSPMEG00000009155	smarcad1a	63	71.739	Poecilia_mexicana
ENSSFOG00015020909	smarcad1a	91	72.093	ENSPREG00000018185	smarcad1a	69	72.093	Poecilia_reticulata
ENSSFOG00015020909	smarcad1a	100	57.235	ENSPPYG00000014935	SMARCAD1	75	57.235	Pongo_abelii
ENSSFOG00015020909	smarcad1a	87	54.600	ENSPCOG00000020478	SMARCAD1	74	54.600	Propithecus_coquereli
ENSSFOG00015020909	smarcad1a	100	57.588	ENSPVAG00000001760	SMARCAD1	74	57.588	Pteropus_vampyrus
ENSSFOG00015020909	smarcad1a	92	69.928	ENSPNYG00000010087	smarcad1a	82	69.928	Pundamilia_nyererei
ENSSFOG00015020909	smarcad1a	100	62.262	ENSPNAG00000010099	smarcad1b	83	62.770	Pygocentrus_nattereri
ENSSFOG00015020909	smarcad1a	100	65.190	ENSPNAG00000001663	smarcad1a	80	65.190	Pygocentrus_nattereri
ENSSFOG00015020909	smarcad1a	100	57.273	ENSRNOG00000006391	Smarcad1	75	57.273	Rattus_norvegicus
ENSSFOG00015020909	smarcad1a	100	57.642	ENSRBIG00000041989	SMARCAD1	74	57.642	Rhinopithecus_bieti
ENSSFOG00015020909	smarcad1a	100	57.642	ENSRROG00000035309	SMARCAD1	74	57.642	Rhinopithecus_roxellana
ENSSFOG00015020909	smarcad1a	100	57.513	ENSSBOG00000032114	SMARCAD1	99	64.538	Saimiri_boliviensis_boliviensis
ENSSFOG00015020909	smarcad1a	100	58.732	ENSSHAG00000001279	SMARCAD1	74	58.732	Sarcophilus_harrisii
ENSSFOG00015020909	smarcad1a	91	72.214	ENSSMAG00000001326	smarcad1a	64	72.214	Scophthalmus_maximus
ENSSFOG00015020909	smarcad1a	91	73.082	ENSSDUG00000022338	smarcad1a	82	73.082	Seriola_dumerili
ENSSFOG00015020909	smarcad1a	91	73.082	ENSSLDG00000024986	smarcad1a	64	73.082	Seriola_lalandi_dorsalis
ENSSFOG00015020909	smarcad1a	78	65.993	ENSSPUG00000004633	SMARCAD1	99	65.993	Sphenodon_punctatus
ENSSFOG00015020909	smarcad1a	94	71.910	ENSSPAG00000001970	smarcad1a	66	71.910	Stegastes_partitus
ENSSFOG00015020909	smarcad1a	100	57.513	ENSSSCG00000009193	SMARCAD1	91	57.513	Sus_scrofa
ENSSFOG00015020909	smarcad1a	100	57.928	ENSTGUG00000003127	SMARCAD1	98	58.892	Taeniopygia_guttata
ENSSFOG00015020909	smarcad1a	100	67.700	ENSTNIG00000017585	smarcad1a	87	67.700	Tetraodon_nigroviridis
ENSSFOG00015020909	smarcad1a	76	65.873	ENSTBEG00000002789	SMARCAD1	56	65.873	Tupaia_belangeri
ENSSFOG00015020909	smarcad1a	100	57.439	ENSTTRG00000000226	SMARCAD1	76	57.439	Tursiops_truncatus
ENSSFOG00015020909	smarcad1a	100	57.642	ENSUAMG00000022262	SMARCAD1	79	57.641	Ursus_americanus
ENSSFOG00015020909	smarcad1a	100	57.772	ENSUMAG00000004549	SMARCAD1	74	57.772	Ursus_maritimus
ENSSFOG00015020909	smarcad1a	100	57.513	ENSVVUG00000007271	SMARCAD1	91	57.513	Vulpes_vulpes
ENSSFOG00015020909	smarcad1a	100	53.342	ENSXETG00000019214	smarcad1	87	52.911	Xenopus_tropicalis
ENSSFOG00015020909	smarcad1a	98	67.300	ENSXCOG00000005232	smarcad1a	83	70.475	Xiphophorus_couchianus
ENSSFOG00015020909	smarcad1a	91	71.221	ENSXMAG00000015350	smarcad1a	62	71.221	Xiphophorus_maculatus