EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015020993 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 8331 bases
Position: chrKV411071.1:1493507-1501837
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015032862	zf-C2H2	PF00096.26	5.5e-42	1	7
ENSSFOP00015032862	zf-C2H2	PF00096.26	5.5e-42	2	7
ENSSFOP00015032862	zf-C2H2	PF00096.26	5.5e-42	3	7
ENSSFOP00015032862	zf-C2H2	PF00096.26	5.5e-42	4	7
ENSSFOP00015032862	zf-C2H2	PF00096.26	5.5e-42	5	7
ENSSFOP00015032862	zf-C2H2	PF00096.26	5.5e-42	6	7
ENSSFOP00015032862	zf-C2H2	PF00096.26	5.5e-42	7	7
ENSSFOP00015032858	zf-C2H2	PF00096.26	4.7e-34	1	6
ENSSFOP00015032858	zf-C2H2	PF00096.26	4.7e-34	2	6
ENSSFOP00015032858	zf-C2H2	PF00096.26	4.7e-34	3	6
ENSSFOP00015032858	zf-C2H2	PF00096.26	4.7e-34	4	6
ENSSFOP00015032858	zf-C2H2	PF00096.26	4.7e-34	5	6
ENSSFOP00015032858	zf-C2H2	PF00096.26	4.7e-34	6	6
ENSSFOP00015032862	zf-met	PF12874.7	4.6e-07	1	1
ENSSFOP00015032858	zf-met	PF12874.7	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033226	-	1896	-	ENSSFOP00015032862	472 (aa)	-	-
ENSSFOT00015033222	-	684	-	ENSSFOP00015032858	227 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015020993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015020993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015020993	-	82	32.432	ENSSFOG00015004064	-	52	32.447
ENSSFOG00015020993	-	66	35.443	ENSSFOG00015021578	snai1a	64	38.919
ENSSFOG00015020993	-	90	48.000	ENSSFOG00015010829	-	85	45.000
ENSSFOG00015020993	-	83	50.000	ENSSFOG00015021291	e4f1	64	40.000
ENSSFOG00015020993	-	77	37.931	ENSSFOG00015020478	prdm5	74	37.931
ENSSFOG00015020993	-	84	46.328	ENSSFOG00015015878	-	91	49.206
ENSSFOG00015020993	-	81	40.909	ENSSFOG00015021176	-	59	38.095
ENSSFOG00015020993	-	90	36.774	ENSSFOG00015023669	-	88	42.593
ENSSFOG00015020993	-	97	41.414	ENSSFOG00015008994	znf236	70	41.667
ENSSFOG00015020993	-	99	30.769	ENSSFOG00015017155	-	85	30.583
ENSSFOG00015020993	-	77	36.607	ENSSFOG00015021699	si:ch211-166g5.4	73	36.607
ENSSFOG00015020993	-	78	50.286	ENSSFOG00015019818	-	81	50.000
ENSSFOG00015020993	-	81	39.161	ENSSFOG00015023295	znf652	84	40.146
ENSSFOG00015020993	-	96	47.368	ENSSFOG00015021831	-	78	46.460
ENSSFOG00015020993	-	93	52.727	ENSSFOG00015005557	-	71	52.727
ENSSFOG00015020993	-	77	33.333	ENSSFOG00015013930	PRDM15	53	31.604
ENSSFOG00015020993	-	78	44.318	ENSSFOG00015008577	-	98	44.318
ENSSFOG00015020993	-	77	49.419	ENSSFOG00015015384	-	80	49.419
ENSSFOG00015020993	-	85	34.667	ENSSFOG00015014678	znf341	51	34.667
ENSSFOG00015020993	-	79	44.681	ENSSFOG00015011531	-	99	42.157
ENSSFOG00015020993	-	78	40.146	ENSSFOG00015012207	-	82	38.806
ENSSFOG00015020993	-	75	37.179	ENSSFOG00015001195	SCRT1	54	37.179
ENSSFOG00015020993	-	81	49.714	ENSSFOG00015000652	ZNF775	95	50.000
ENSSFOG00015020993	-	81	44.571	ENSSFOG00015003121	znf668	83	44.571
ENSSFOG00015020993	-	81	45.143	ENSSFOG00015009678	-	57	45.143
ENSSFOG00015020993	-	79	38.393	ENSSFOG00015008114	-	57	38.393
ENSSFOG00015020993	-	85	47.590	ENSSFOG00015006108	-	58	47.590
ENSSFOG00015020993	-	78	40.260	ENSSFOG00015016115	snai3	52	39.744
ENSSFOG00015020993	-	81	36.054	ENSSFOG00015018025	SNAI2	58	36.667
ENSSFOG00015020993	-	89	38.843	ENSSFOG00015004737	si:dkey-89b17.4	76	37.500
ENSSFOG00015020993	-	83	43.636	ENSSFOG00015015958	-	74	41.736
ENSSFOG00015020993	-	96	48.000	ENSSFOG00015013448	-	85	47.210
ENSSFOG00015020993	-	69	36.364	ENSSFOG00015019679	-	66	39.024
ENSSFOG00015020993	-	89	44.706	ENSSFOG00015014778	znf526	55	44.706
ENSSFOG00015020993	-	85	45.926	ENSSFOG00015006083	-	56	46.324
ENSSFOG00015020993	-	88	40.909	ENSSFOG00015012089	ZNF319	97	37.603
ENSSFOG00015020993	-	78	36.364	ENSSFOG00015015427	znf366	57	36.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015020993	-	94	51.240	ENSACAG00000027001	-	97	51.240	Anolis_carolinensis
ENSSFOG00015020993	-	92	49.714	ENSACAG00000026906	-	99	49.714	Anolis_carolinensis
ENSSFOG00015020993	-	55	44.444	ENSACAG00000026916	-	81	44.444	Anolis_carolinensis
ENSSFOG00015020993	-	82	42.857	ENSAMXG00000038122	-	94	50.000	Astyanax_mexicanus
ENSSFOG00015020993	-	83	42.857	ENSAMXG00000014745	-	88	42.105	Astyanax_mexicanus
ENSSFOG00015020993	-	78	42.857	ENSELUG00000018970	-	92	43.885	Esox_lucius
ENSSFOG00015020993	-	77	47.701	ENSELUG00000021525	-	65	47.701	Esox_lucius
ENSSFOG00015020993	-	79	44.118	ENSELUG00000013806	-	64	44.118	Esox_lucius
ENSSFOG00015020993	-	84	44.767	ENSELUG00000011838	-	79	40.201	Esox_lucius
ENSSFOG00015020993	-	85	43.103	ENSELUG00000000485	-	89	45.506	Esox_lucius
ENSSFOG00015020993	-	78	42.045	ENSGACG00000001523	-	99	42.045	Gasterosteus_aculeatus
ENSSFOG00015020993	-	80	42.442	ENSHBUG00000016384	-	82	42.442	Haplochromis_burtoni
ENSSFOG00015020993	-	92	42.857	ENSHCOG00000001629	-	64	42.857	Hippocampus_comes
ENSSFOG00015020993	-	92	39.286	ENSHCOG00000017456	-	94	36.508	Hippocampus_comes
ENSSFOG00015020993	-	82	37.500	ENSLBEG00000013235	-	84	39.662	Labrus_bergylta
ENSSFOG00015020993	-	86	41.333	ENSMGAG00000016603	-	99	42.177	Meleagris_gallopavo
ENSSFOG00015020993	-	77	49.143	ENSPNAG00000009184	-	88	48.291	Pygocentrus_nattereri
ENSSFOG00015020993	-	88	49.714	ENSPNAG00000009176	-	92	49.714	Pygocentrus_nattereri
ENSSFOG00015020993	-	85	39.205	ENSTNIG00000000528	-	100	39.831	Tetraodon_nigroviridis
ENSSFOG00015020993	-	84	44.737	ENSTNIG00000002343	-	98	43.299	Tetraodon_nigroviridis
ENSSFOG00015020993	-	78	43.262	ENSXMAG00000020042	-	82	39.738	Xiphophorus_maculatus