EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021154 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 5520 bases
Position: chrKV410853.1:899286-904805
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033170	Prp18	PF02840.15	1.1e-32	1	1
ENSSFOP00015033155	Prp18	PF02840.15	2.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033534	-	579	-	ENSSFOP00015033170	192 (aa)	-	-
ENSSFOT00015033519	-	633	-	ENSSFOP00015033155	210 (aa)	-	-

Gene Model

Click here to download ENSSFOG00015021154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021154	-	89	52.558	ENSSFOG00015022118	prpf18	66	52.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021154	-	89	48.927	ENSG00000165630	PRPF18	77	44.528	Homo_sapiens
ENSSFOG00015021154	-	89	49.561	ENSAPOG00000024177	prpf18	77	45.455	Acanthochromis_polyacanthus
ENSSFOG00015021154	-	89	48.927	ENSAMEG00000013591	-	77	44.528	Ailuropoda_melanoleuca
ENSSFOG00015021154	-	89	48.498	ENSACIG00000001186	prpf18	77	45.833	Amphilophus_citrinellus
ENSSFOG00015021154	-	89	48.069	ENSAOCG00000006572	prpf18	71	45.076	Amphiprion_ocellaris
ENSSFOG00015021154	-	89	48.069	ENSAPEG00000004564	prpf18	77	45.076	Amphiprion_percula
ENSSFOG00015021154	-	89	48.498	ENSATEG00000000303	prpf18	77	45.076	Anabas_testudineus
ENSSFOG00015021154	-	89	48.498	ENSAPLG00000003387	-	77	44.528	Anas_platyrhynchos
ENSSFOG00015021154	-	89	48.498	ENSACAG00000000818	-	78	43.446	Anolis_carolinensis
ENSSFOG00015021154	-	89	48.927	ENSANAG00000037445	-	77	44.151	Aotus_nancymaae
ENSSFOG00015021154	-	89	47.639	ENSACLG00000026296	prpf18	80	45.455	Astatotilapia_calliptera
ENSSFOG00015021154	-	89	50.215	ENSAMXG00000012848	prpf18	67	50.215	Astyanax_mexicanus
ENSSFOG00015021154	-	89	48.927	ENSBTAG00000017244	PRPF18	77	44.528	Bos_taurus
ENSSFOG00015021154	-	89	48.927	ENSCJAG00000009432	-	77	44.151	Callithrix_jacchus
ENSSFOG00015021154	-	89	48.927	ENSCAFG00000004735	-	77	44.528	Canis_familiaris
ENSSFOG00015021154	-	89	48.927	ENSCAFG00020007712	-	77	44.528	Canis_lupus_dingo
ENSSFOG00015021154	-	89	48.927	ENSCHIG00000000499	-	77	44.528	Capra_hircus
ENSSFOG00015021154	-	89	48.927	ENSTSYG00000003517	-	77	44.528	Carlito_syrichta
ENSSFOG00015021154	-	56	67.593	ENSCAPG00000010527	-	69	67.593	Cavia_aperea
ENSSFOG00015021154	-	89	48.927	ENSCPOG00000021069	-	77	44.528	Cavia_porcellus
ENSSFOG00015021154	-	89	48.927	ENSCCAG00000036822	-	77	44.151	Cebus_capucinus
ENSSFOG00015021154	-	92	48.430	ENSCATG00000016633	-	75	48.261	Cercocebus_atys
ENSSFOG00015021154	-	89	48.927	ENSCLAG00000011770	-	77	44.528	Chinchilla_lanigera
ENSSFOG00015021154	-	89	48.927	ENSCSAG00000013109	-	66	48.927	Chlorocebus_sabaeus
ENSSFOG00015021154	-	89	45.344	ENSCPBG00000003100	-	78	42.294	Chrysemys_picta_bellii
ENSSFOG00015021154	-	90	34.043	ENSCING00000020481	-	68	34.043	Ciona_intestinalis
ENSSFOG00015021154	-	89	33.621	ENSCSAVG00000010546	-	68	33.190	Ciona_savignyi
ENSSFOG00015021154	-	89	48.927	ENSCANG00000034900	-	77	44.528	Colobus_angolensis_palliatus
ENSSFOG00015021154	-	89	48.927	ENSCGRG00001023665	Prpf18	77	44.528	Cricetulus_griseus_chok1gshd
ENSSFOG00015021154	-	89	48.927	ENSCGRG00000014690	Prpf18	77	44.528	Cricetulus_griseus_crigri
ENSSFOG00015021154	-	89	53.333	ENSCSEG00000005536	prpf18	77	46.212	Cynoglossus_semilaevis
ENSSFOG00015021154	-	89	51.887	ENSCVAG00000012401	prpf18	76	48.148	Cyprinodon_variegatus
ENSSFOG00015021154	-	89	50.215	ENSDARG00000058306	prpf18	68	50.215	Danio_rerio
ENSSFOG00015021154	-	89	48.927	ENSDNOG00000035607	-	77	44.528	Dasypus_novemcinctus
ENSSFOG00015021154	-	89	48.927	ENSDORG00000000858	Prpf18	77	44.528	Dipodomys_ordii
ENSSFOG00015021154	-	89	48.069	ENSETEG00000015060	-	68	48.069	Echinops_telfairi
ENSSFOG00015021154	-	90	45.957	ENSEBUG00000016502	prpf18	67	45.957	Eptatretus_burgeri
ENSSFOG00015021154	-	89	48.927	ENSEASG00005019373	-	77	44.528	Equus_asinus_asinus
ENSSFOG00015021154	-	89	51.905	ENSECAG00000006997	PRPF18	77	44.528	Equus_caballus
ENSSFOG00015021154	-	89	50.000	ENSELUG00000022190	prpf18	78	45.489	Esox_lucius
ENSSFOG00015021154	-	89	48.927	ENSFCAG00000004436	-	77	44.528	Felis_catus
ENSSFOG00015021154	-	89	48.498	ENSFALG00000001912	-	72	47.325	Ficedula_albicollis
ENSSFOG00015021154	-	89	48.927	ENSFDAG00000014026	-	83	44.528	Fukomys_damarensis
ENSSFOG00015021154	-	87	41.429	ENSFDAG00000010713	-	73	41.429	Fukomys_damarensis
ENSSFOG00015021154	-	89	48.927	ENSFHEG00000020125	prpf18	86	48.117	Fundulus_heteroclitus
ENSSFOG00015021154	-	89	48.498	ENSGMOG00000012210	prpf18	77	44.828	Gadus_morhua
ENSSFOG00015021154	-	89	48.498	ENSGALG00000043593	-	77	44.528	Gallus_gallus
ENSSFOG00015021154	-	89	48.927	ENSGAFG00000006034	prpf18	77	44.318	Gambusia_affinis
ENSSFOG00015021154	-	89	48.498	ENSGACG00000012232	prpf18	77	44.697	Gasterosteus_aculeatus
ENSSFOG00015021154	-	89	48.498	ENSGAGG00000016878	-	77	44.151	Gopherus_agassizii
ENSSFOG00015021154	-	89	48.927	ENSGGOG00000025188	-	81	44.528	Gorilla_gorilla
ENSSFOG00015021154	-	89	47.639	ENSHBUG00000010264	prpf18	77	45.455	Haplochromis_burtoni
ENSSFOG00015021154	-	89	48.927	ENSHGLG00000018534	PRPF18	77	44.528	Heterocephalus_glaber_female
ENSSFOG00015021154	-	89	48.927	ENSHGLG00100012161	-	81	44.528	Heterocephalus_glaber_male
ENSSFOG00015021154	-	89	48.069	ENSHCOG00000015987	prpf18	77	45.455	Hippocampus_comes
ENSSFOG00015021154	-	89	49.785	ENSIPUG00000007432	prpf18	67	48.936	Ictalurus_punctatus
ENSSFOG00015021154	-	89	48.927	ENSSTOG00000008735	-	77	44.528	Ictidomys_tridecemlineatus
ENSSFOG00015021154	-	89	48.927	ENSJJAG00000024041	-	77	44.528	Jaculus_jaculus
ENSSFOG00015021154	-	80	42.439	ENSJJAG00000015191	-	71	42.439	Jaculus_jaculus
ENSSFOG00015021154	-	89	53.333	ENSKMAG00000012124	prpf18	77	45.076	Kryptolebias_marmoratus
ENSSFOG00015021154	-	89	48.069	ENSLBEG00000028466	prpf18	78	43.939	Labrus_bergylta
ENSSFOG00015021154	-	89	49.785	ENSLACG00000009885	prpf18	77	44.906	Latimeria_chalumnae
ENSSFOG00015021154	-	89	49.356	ENSLOCG00000016736	prpf18	77	44.528	Lepisosteus_oculatus
ENSSFOG00015021154	-	89	48.927	ENSLAFG00000007753	-	77	44.528	Loxodonta_africana
ENSSFOG00015021154	-	89	48.927	ENSMFAG00000000540	-	77	44.528	Macaca_fascicularis
ENSSFOG00015021154	-	89	48.927	ENSMMUG00000015071	PRPF18	73	63.025	Macaca_mulatta
ENSSFOG00015021154	-	89	48.927	ENSMNEG00000024679	-	77	44.528	Macaca_nemestrina
ENSSFOG00015021154	-	73	40.394	ENSMLEG00000031715	-	82	37.553	Mandrillus_leucophaeus
ENSSFOG00015021154	-	89	51.073	ENSMAMG00000006610	prpf18	68	51.073	Mastacembelus_armatus
ENSSFOG00015021154	-	89	47.639	ENSMZEG00005019392	prpf18	77	45.455	Maylandia_zebra
ENSSFOG00015021154	-	89	48.498	ENSMGAG00000005023	-	77	44.528	Meleagris_gallopavo
ENSSFOG00015021154	-	89	49.099	ENSMICG00000006572	-	77	45.669	Microcebus_murinus
ENSSFOG00015021154	-	89	48.927	ENSMOCG00000021468	Prpf18	77	44.528	Microtus_ochrogaster
ENSSFOG00015021154	-	89	50.215	ENSMMOG00000013012	prpf18	77	45.247	Mola_mola
ENSSFOG00015021154	-	89	48.927	ENSMODG00000016902	-	65	48.927	Monodelphis_domestica
ENSSFOG00015021154	-	52	66.667	ENSMODG00000024051	-	63	66.667	Monodelphis_domestica
ENSSFOG00015021154	-	90	47.034	ENSMODG00000024043	-	77	43.396	Monodelphis_domestica
ENSSFOG00015021154	-	89	50.000	ENSMALG00000005486	prpf18	67	50.885	Monopterus_albus
ENSSFOG00015021154	-	89	48.927	MGP_CAROLIEiJ_G0023143	Prpf18	77	44.151	Mus_caroli
ENSSFOG00015021154	-	89	48.927	ENSMUSG00000039449	Prpf18	77	44.151	Mus_musculus
ENSSFOG00015021154	-	89	48.927	MGP_PahariEiJ_G0019203	Prpf18	77	44.151	Mus_pahari
ENSSFOG00015021154	-	89	48.927	MGP_SPRETEiJ_G0024061	Prpf18	77	44.151	Mus_spretus
ENSSFOG00015021154	-	89	48.927	ENSMPUG00000000938	-	77	44.528	Mustela_putorius_furo
ENSSFOG00015021154	-	89	48.927	ENSMLUG00000009200	-	77	44.151	Myotis_lucifugus
ENSSFOG00015021154	-	88	48.918	ENSNGAG00000012500	-	77	44.906	Nannospalax_galili
ENSSFOG00015021154	-	73	48.925	ENSNGAG00000023550	-	67	50.538	Nannospalax_galili
ENSSFOG00015021154	-	89	47.639	ENSNBRG00000001778	prpf18	77	45.455	Neolamprologus_brichardi
ENSSFOG00015021154	-	89	48.927	ENSNLEG00000012186	-	77	44.528	Nomascus_leucogenys
ENSSFOG00015021154	-	84	42.466	ENSMEUG00000005032	-	65	42.466	Notamacropus_eugenii
ENSSFOG00015021154	-	51	45.455	ENSOPRG00000002153	-	54	45.455	Ochotona_princeps
ENSSFOG00015021154	-	89	48.927	ENSODEG00000003770	-	77	44.528	Octodon_degus
ENSSFOG00015021154	-	89	47.639	ENSONIG00000014854	prpf18	76	45.455	Oreochromis_niloticus
ENSSFOG00015021154	-	89	48.927	ENSOANG00000015404	-	77	45.283	Ornithorhynchus_anatinus
ENSSFOG00015021154	-	89	48.927	ENSOCUG00000027756	-	77	44.528	Oryctolagus_cuniculus
ENSSFOG00015021154	-	95	49.004	ENSORLG00000010293	prpf18	72	49.801	Oryzias_latipes
ENSSFOG00015021154	-	95	49.004	ENSORLG00020001530	prpf18	74	49.801	Oryzias_latipes_hni
ENSSFOG00015021154	-	95	49.004	ENSORLG00015013705	prpf18	74	49.801	Oryzias_latipes_hsok
ENSSFOG00015021154	-	89	51.502	ENSOMEG00000009167	prpf18	74	50.199	Oryzias_melastigma
ENSSFOG00015021154	-	89	48.927	ENSOGAG00000007294	-	77	44.528	Otolemur_garnettii
ENSSFOG00015021154	-	89	48.927	ENSOARG00000006243	-	78	44.528	Ovis_aries
ENSSFOG00015021154	-	89	48.927	ENSPPAG00000041959	-	77	44.528	Pan_paniscus
ENSSFOG00015021154	-	89	48.927	ENSPPRG00000000107	-	77	44.528	Panthera_pardus
ENSSFOG00015021154	-	89	48.927	ENSPTIG00000021094	-	77	44.528	Panthera_tigris_altaica
ENSSFOG00015021154	-	89	48.927	ENSPTRG00000002306	PRPF18	77	44.528	Pan_troglodytes
ENSSFOG00015021154	-	89	48.927	ENSPANG00000023346	-	77	44.528	Papio_anubis
ENSSFOG00015021154	-	89	51.073	ENSPKIG00000014128	prpf18	81	34.494	Paramormyrops_kingsleyae
ENSSFOG00015021154	-	89	48.069	ENSPSIG00000016064	-	77	43.019	Pelodiscus_sinensis
ENSSFOG00015021154	-	89	52.558	ENSPMGG00000016486	prpf18	66	52.558	Periophthalmus_magnuspinnatus
ENSSFOG00015021154	-	89	48.927	ENSPEMG00000013704	Prpf18	77	44.528	Peromyscus_maniculatus_bairdii
ENSSFOG00015021154	-	89	46.552	ENSPMAG00000000204	prpf18	67	46.552	Petromyzon_marinus
ENSSFOG00015021154	-	89	48.927	ENSPCIG00000012963	-	83	44.528	Phascolarctos_cinereus
ENSSFOG00015021154	-	89	48.498	ENSPFOG00000017611	prpf18	67	48.498	Poecilia_formosa
ENSSFOG00015021154	-	89	48.498	ENSPLAG00000000369	prpf18	77	43.939	Poecilia_latipinna
ENSSFOG00015021154	-	89	48.498	ENSPMEG00000005183	prpf18	77	43.939	Poecilia_mexicana
ENSSFOG00015021154	-	89	48.927	ENSPREG00000015232	prpf18	77	43.939	Poecilia_reticulata
ENSSFOG00015021154	-	89	48.927	ENSPPYG00000002101	PRPF18	77	44.151	Pongo_abelii
ENSSFOG00015021154	-	52	35.417	ENSPCAG00000010833	-	56	35.417	Procavia_capensis
ENSSFOG00015021154	-	89	48.927	ENSPCOG00000013057	-	74	48.927	Propithecus_coquereli
ENSSFOG00015021154	-	89	47.639	ENSPNYG00000003554	prpf18	77	45.455	Pundamilia_nyererei
ENSSFOG00015021154	-	89	50.215	ENSPNAG00000023151	prpf18	66	50.215	Pygocentrus_nattereri
ENSSFOG00015021154	-	89	48.927	ENSRNOG00000018396	Prpf18	77	44.528	Rattus_norvegicus
ENSSFOG00015021154	-	89	51.905	ENSRBIG00000028028	-	76	47.934	Rhinopithecus_bieti
ENSSFOG00015021154	-	89	48.927	ENSRROG00000040695	-	77	44.528	Rhinopithecus_roxellana
ENSSFOG00015021154	-	89	48.927	ENSSBOG00000034482	-	77	44.151	Saimiri_boliviensis_boliviensis
ENSSFOG00015021154	-	91	44.444	ENSSHAG00000009669	-	69	44.444	Sarcophilus_harrisii
ENSSFOG00015021154	-	89	48.927	ENSSHAG00000016463	-	77	44.528	Sarcophilus_harrisii
ENSSFOG00015021154	-	95	47.809	ENSSMAG00000005308	prpf18	77	45.455	Scophthalmus_maximus
ENSSFOG00015021154	-	89	48.498	ENSSDUG00000015428	prpf18	74	50.215	Seriola_dumerili
ENSSFOG00015021154	-	89	48.498	ENSSLDG00000023989	prpf18	77	45.833	Seriola_lalandi_dorsalis
ENSSFOG00015021154	-	87	58.779	ENSSPUG00000002619	-	77	44.528	Sphenodon_punctatus
ENSSFOG00015021154	-	89	48.498	ENSSPAG00000019502	prpf18	77	45.833	Stegastes_partitus
ENSSFOG00015021154	-	89	51.905	ENSSSCG00000026354	-	76	46.694	Sus_scrofa
ENSSFOG00015021154	-	89	48.498	ENSTGUG00000002286	-	77	44.528	Taeniopygia_guttata
ENSSFOG00015021154	-	89	49.785	ENSTRUG00000011278	prpf18	77	45.076	Takifugu_rubripes
ENSSFOG00015021154	-	89	50.215	ENSTNIG00000000911	prpf18	77	46.591	Tetraodon_nigroviridis
ENSSFOG00015021154	-	89	48.927	ENSTTRG00000011117	PRPF18	77	44.906	Tursiops_truncatus
ENSSFOG00015021154	-	89	48.927	ENSUAMG00000001815	-	79	44.528	Ursus_americanus
ENSSFOG00015021154	-	89	44.206	ENSUMAG00000012329	-	77	40.377	Ursus_maritimus
ENSSFOG00015021154	-	89	42.672	ENSVPAG00000011486	-	66	42.672	Vicugna_pacos
ENSSFOG00015021154	-	89	48.927	ENSVVUG00000005453	-	77	44.528	Vulpes_vulpes
ENSSFOG00015021154	-	89	48.069	ENSXETG00000024057	prpf18	78	42.910	Xenopus_tropicalis
ENSSFOG00015021154	-	89	48.511	ENSXCOG00000020414	prpf18	77	43.774	Xiphophorus_couchianus
ENSSFOG00015021154	-	89	48.927	ENSXMAG00000004713	prpf18	70	44.318	Xiphophorus_maculatus