EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021178 (Gene tree)
Gene ID: 108938851
Gene Symbol: camk1a
Alias: si:dkey-172f5.1
Full Name: calcium/calmodulin-dependent protein kinase type 1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 36092 bases
Position: chrKV410798.1:7812578-7848669
Accession: 108938851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033193	RIO1	PF01163.22	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033574	-	4519	-	ENSSFOP00015033209	473 (aa)	-	-
ENSSFOT00015033557	-	4628	XM_018759815	ENSSFOP00015033193	368 (aa)	XP_018615331	A0A1W5AR67

Gene Model

Click here to download ENSSFOG00015021178's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04020	Calcium signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021178	camk1a	71	35.714	ENSSFOG00015018163	-	62	43.689
ENSSFOG00015021178	camk1a	82	33.436	ENSSFOG00015005989	rps6ka4	78	33.436
ENSSFOG00015021178	camk1a	60	30.435	ENSSFOG00015002013	uhmk1	56	30.435
ENSSFOG00015021178	camk1a	84	37.931	ENSSFOG00015020846	si:dkey-240h12.4	88	37.931
ENSSFOG00015021178	camk1a	99	87.601	ENSSFOG00015019005	camk1	98	87.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021178	camk1a	92	89.412	ENSCSEG00000004982	camk1b	95	89.412	Cynoglossus_semilaevis
ENSSFOG00015021178	camk1a	92	91.988	ENSELUG00000008588	camk1b	99	83.420	Esox_lucius
ENSSFOG00015021178	camk1a	67	93.089	ENSGMOG00000001841	-	100	93.089	Gadus_morhua
ENSSFOG00015021178	camk1a	92	90.828	ENSGMOG00000016883	camk1a	99	90.828	Gadus_morhua
ENSSFOG00015021178	camk1a	100	82.487	ENSPNAG00000002527	camk1b	97	82.487	Pygocentrus_nattereri
ENSSFOG00015021178	camk1a	100	83.967	ENSXETG00000023672	camk1	95	83.967	Xenopus_tropicalis