EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021228 (Gene tree)
Gene ID: 108940197
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 8078 bases
Position: chrKV410798.1:7862695-7870772
Accession: 108940197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033263	GN3L_Grn1	PF08701.11	3.3e-21	1	1
ENSSFOP00015033263	MMR_HSR1	PF01926.23	5.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033628	-	3787	XM_018762185	ENSSFOP00015033263	546 (aa)	XP_018617701	A0A1W5AXN7

Gene Model

Click here to download ENSSFOG00015021228's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021228	gnl3	88	40.000	ENSSFOG00015008883	gnl3l	61	47.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021228	gnl3	99	45.683	ENSG00000163938	GNL3	99	53.623	Homo_sapiens
ENSSFOG00015021228	gnl3	100	58.246	ENSAPOG00000004048	gnl3	100	58.494	Acanthochromis_polyacanthus
ENSSFOG00015021228	gnl3	99	44.523	ENSAMEG00000008456	GNL3	99	44.681	Ailuropoda_melanoleuca
ENSSFOG00015021228	gnl3	100	58.984	ENSACIG00000000545	gnl3	100	57.741	Amphilophus_citrinellus
ENSSFOG00015021228	gnl3	100	58.393	ENSAOCG00000012879	gnl3	100	58.214	Amphiprion_ocellaris
ENSSFOG00015021228	gnl3	100	58.750	ENSAPEG00000006146	gnl3	100	58.393	Amphiprion_percula
ENSSFOG00015021228	gnl3	100	60.286	ENSATEG00000024242	gnl3	100	59.857	Anabas_testudineus
ENSSFOG00015021228	gnl3	81	50.000	ENSAPLG00000005171	GNL3	99	47.243	Anas_platyrhynchos
ENSSFOG00015021228	gnl3	99	46.691	ENSACAG00000007357	GNL3	99	46.346	Anolis_carolinensis
ENSSFOG00015021228	gnl3	99	46.223	ENSANAG00000033209	GNL3	99	44.964	Aotus_nancymaae
ENSSFOG00015021228	gnl3	100	59.239	ENSACLG00000007381	gnl3	100	58.000	Astatotilapia_calliptera
ENSSFOG00015021228	gnl3	99	51.579	ENSAMXG00000020880	gnl3	99	52.381	Astyanax_mexicanus
ENSSFOG00015021228	gnl3	99	44.504	ENSBTAG00000014549	GNL3	99	45.583	Bos_taurus
ENSSFOG00015021228	gnl3	99	46.763	ENSCJAG00000044256	-	99	46.223	Callithrix_jacchus
ENSSFOG00015021228	gnl3	99	46.763	ENSCJAG00000006864	-	99	46.223	Callithrix_jacchus
ENSSFOG00015021228	gnl3	86	49.170	ENSCAFG00000009004	GNL3	85	49.170	Canis_familiaris
ENSSFOG00015021228	gnl3	86	49.378	ENSCAFG00020002613	GNL3	89	49.890	Canis_lupus_dingo
ENSSFOG00015021228	gnl3	99	46.397	ENSCHIG00000022181	GNL3	99	45.833	Capra_hircus
ENSSFOG00015021228	gnl3	99	44.858	ENSTSYG00000006851	GNL3	99	44.326	Carlito_syrichta
ENSSFOG00015021228	gnl3	99	43.761	ENSCPOG00000000282	GNL3	99	43.585	Cavia_porcellus
ENSSFOG00015021228	gnl3	99	46.126	ENSCCAG00000033281	GNL3	99	44.865	Cebus_capucinus
ENSSFOG00015021228	gnl3	99	45.276	ENSCATG00000040886	GNL3	99	42.882	Cercocebus_atys
ENSSFOG00015021228	gnl3	99	46.196	ENSCLAG00000010109	-	99	46.196	Chinchilla_lanigera
ENSSFOG00015021228	gnl3	99	45.276	ENSCSAG00000013315	GNL3	99	44.385	Chlorocebus_sabaeus
ENSSFOG00015021228	gnl3	99	42.681	ENSCHOG00000002726	GNL3	84	46.429	Choloepus_hoffmanni
ENSSFOG00015021228	gnl3	77	46.682	ENSCPBG00000018330	-	96	47.153	Chrysemys_picta_bellii
ENSSFOG00015021228	gnl3	98	44.587	ENSCANG00000039969	GNL3	85	47.198	Colobus_angolensis_palliatus
ENSSFOG00015021228	gnl3	99	45.242	ENSCGRG00001020950	Gnl3	99	44.797	Cricetulus_griseus_chok1gshd
ENSSFOG00015021228	gnl3	99	45.242	ENSCGRG00000015225	Gnl3	99	44.797	Cricetulus_griseus_crigri
ENSSFOG00015021228	gnl3	99	58.169	ENSCSEG00000005009	gnl3	100	57.810	Cynoglossus_semilaevis
ENSSFOG00015021228	gnl3	100	57.451	ENSCVAG00000010679	gnl3	100	57.168	Cyprinodon_variegatus
ENSSFOG00015021228	gnl3	99	52.724	ENSDARG00000006219	gnl3	99	53.603	Danio_rerio
ENSSFOG00015021228	gnl3	99	43.554	ENSDNOG00000001037	GNL3	99	43.478	Dasypus_novemcinctus
ENSSFOG00015021228	gnl3	99	45.126	ENSDORG00000000674	Gnl3	99	44.565	Dipodomys_ordii
ENSSFOG00015021228	gnl3	89	74.648	ENSETEG00000016534	-	74	74.648	Echinops_telfairi
ENSSFOG00015021228	gnl3	99	45.893	ENSEASG00005014636	GNL3	99	46.429	Equus_asinus_asinus
ENSSFOG00015021228	gnl3	99	45.567	ENSECAG00000014850	GNL3	99	45.359	Equus_caballus
ENSSFOG00015021228	gnl3	99	43.066	ENSEEUG00000004427	GNL3	85	47.639	Erinaceus_europaeus
ENSSFOG00015021228	gnl3	100	58.938	ENSELUG00000008767	gnl3	100	58.467	Esox_lucius
ENSSFOG00015021228	gnl3	99	44.112	ENSFCAG00000015719	GNL3	99	43.034	Felis_catus
ENSSFOG00015021228	gnl3	99	48.936	ENSFALG00000008957	GNL3	99	48.841	Ficedula_albicollis
ENSSFOG00015021228	gnl3	99	45.035	ENSFDAG00000020679	GNL3	99	44.662	Fukomys_damarensis
ENSSFOG00015021228	gnl3	100	56.810	ENSFHEG00000020897	gnl3	100	56.810	Fundulus_heteroclitus
ENSSFOG00015021228	gnl3	99	50.890	ENSGMOG00000001745	gnl3	100	49.819	Gadus_morhua
ENSSFOG00015021228	gnl3	99	46.907	ENSGALG00000001613	GNL3	99	45.423	Gallus_gallus
ENSSFOG00015021228	gnl3	99	50.000	ENSGAFG00000007184	gnl3	99	48.741	Gambusia_affinis
ENSSFOG00015021228	gnl3	99	55.160	ENSGACG00000000309	gnl3	99	55.036	Gasterosteus_aculeatus
ENSSFOG00015021228	gnl3	79	47.651	ENSGAGG00000021579	-	97	47.758	Gopherus_agassizii
ENSSFOG00015021228	gnl3	99	45.324	ENSGGOG00000011444	GNL3	85	48.000	Gorilla_gorilla
ENSSFOG00015021228	gnl3	100	60.573	ENSHBUG00000001340	gnl3	100	60.503	Haplochromis_burtoni
ENSSFOG00015021228	gnl3	99	45.230	ENSHGLG00000018299	GNL3	99	45.536	Heterocephalus_glaber_female
ENSSFOG00015021228	gnl3	99	53.832	ENSHCOG00000009446	gnl3	99	55.957	Hippocampus_comes
ENSSFOG00015021228	gnl3	99	51.756	ENSIPUG00000023677	gnl3	93	56.458	Ictalurus_punctatus
ENSSFOG00015021228	gnl3	99	45.633	ENSSTOG00000000356	GNL3	99	44.425	Ictidomys_tridecemlineatus
ENSSFOG00015021228	gnl3	99	46.250	ENSJJAG00000021993	Gnl3	100	46.250	Jaculus_jaculus
ENSSFOG00015021228	gnl3	100	57.685	ENSKMAG00000005965	gnl3	100	58.951	Kryptolebias_marmoratus
ENSSFOG00015021228	gnl3	100	57.979	ENSLBEG00000011394	gnl3	100	57.630	Labrus_bergylta
ENSSFOG00015021228	gnl3	99	49.826	ENSLACG00000001259	GNL3	99	50.000	Latimeria_chalumnae
ENSSFOG00015021228	gnl3	99	55.929	ENSLOCG00000010542	gnl3	99	56.762	Lepisosteus_oculatus
ENSSFOG00015021228	gnl3	99	43.238	ENSLAFG00000016056	GNL3	99	42.657	Loxodonta_africana
ENSSFOG00015021228	gnl3	99	44.405	ENSMFAG00000000613	GNL3	99	43.058	Macaca_fascicularis
ENSSFOG00015021228	gnl3	98	43.013	ENSMMUG00000012511	GNL3	99	41.652	Macaca_mulatta
ENSSFOG00015021228	gnl3	98	43.194	ENSMNEG00000041979	GNL3	99	41.831	Macaca_nemestrina
ENSSFOG00015021228	gnl3	99	45.455	ENSMLEG00000027696	GNL3	99	43.058	Mandrillus_leucophaeus
ENSSFOG00015021228	gnl3	100	62.342	ENSMAMG00000008904	gnl3	100	62.342	Mastacembelus_armatus
ENSSFOG00015021228	gnl3	86	57.263	ENSMZEG00005014957	-	93	58.316	Maylandia_zebra
ENSSFOG00015021228	gnl3	100	60.465	ENSMZEG00005014857	gnl3	100	60.503	Maylandia_zebra
ENSSFOG00015021228	gnl3	91	40.402	ENSMGAG00000000848	GNL3	99	38.552	Meleagris_gallopavo
ENSSFOG00015021228	gnl3	99	44.746	ENSMAUG00000020178	Gnl3	99	44.484	Mesocricetus_auratus
ENSSFOG00015021228	gnl3	99	42.504	ENSMICG00000016373	GNL3	99	41.270	Microcebus_murinus
ENSSFOG00015021228	gnl3	99	46.667	ENSMOCG00000018437	Gnl3	99	46.237	Microtus_ochrogaster
ENSSFOG00015021228	gnl3	99	54.679	ENSMMOG00000002815	gnl3	99	54.212	Mola_mola
ENSSFOG00015021228	gnl3	86	50.211	ENSMODG00000011257	GNL3	99	46.071	Monodelphis_domestica
ENSSFOG00015021228	gnl3	99	51.730	ENSMALG00000021043	gnl3	93	61.688	Monopterus_albus
ENSSFOG00015021228	gnl3	99	44.386	MGP_CAROLIEiJ_G0019063	Gnl3	99	44.133	Mus_caroli
ENSSFOG00015021228	gnl3	99	44.112	ENSMUSG00000042354	Gnl3	100	54.248	Mus_musculus
ENSSFOG00015021228	gnl3	99	43.816	MGP_PahariEiJ_G0030080	Gnl3	99	45.126	Mus_pahari
ENSSFOG00015021228	gnl3	99	44.149	MGP_SPRETEiJ_G0019948	Gnl3	99	44.086	Mus_spretus
ENSSFOG00015021228	gnl3	99	44.268	ENSMPUG00000016777	GNL3	99	44.248	Mustela_putorius_furo
ENSSFOG00015021228	gnl3	99	44.982	ENSMLUG00000000728	GNL3	99	44.803	Myotis_lucifugus
ENSSFOG00015021228	gnl3	99	45.213	ENSNGAG00000017202	Gnl3	99	45.027	Nannospalax_galili
ENSSFOG00015021228	gnl3	86	58.455	ENSNBRG00000013161	gnl3	96	58.455	Neolamprologus_brichardi
ENSSFOG00015021228	gnl3	99	45.293	ENSNLEG00000007173	GNL3	99	43.585	Nomascus_leucogenys
ENSSFOG00015021228	gnl3	85	39.610	ENSMEUG00000011502	-	87	40.330	Notamacropus_eugenii
ENSSFOG00015021228	gnl3	78	41.818	ENSOPRG00000009356	GNL3	95	41.055	Ochotona_princeps
ENSSFOG00015021228	gnl3	99	46.085	ENSODEG00000009492	GNL3	99	46.085	Octodon_degus
ENSSFOG00015021228	gnl3	100	60.286	ENSONIG00000019335	gnl3	100	59.928	Oreochromis_niloticus
ENSSFOG00015021228	gnl3	99	46.607	ENSOANG00000013437	GNL3	99	45.374	Ornithorhynchus_anatinus
ENSSFOG00015021228	gnl3	99	44.345	ENSOCUG00000009841	GNL3	99	44.071	Oryctolagus_cuniculus
ENSSFOG00015021228	gnl3	100	58.770	ENSORLG00000016030	gnl3	100	57.581	Oryzias_latipes
ENSSFOG00015021228	gnl3	100	58.770	ENSORLG00020014358	gnl3	100	57.581	Oryzias_latipes_hni
ENSSFOG00015021228	gnl3	100	58.409	ENSORLG00015009489	gnl3	100	57.401	Oryzias_latipes_hsok
ENSSFOG00015021228	gnl3	100	57.505	ENSOMEG00000005462	gnl3	100	57.324	Oryzias_melastigma
ENSSFOG00015021228	gnl3	99	44.821	ENSOGAG00000004101	GNL3	99	45.035	Otolemur_garnettii
ENSSFOG00015021228	gnl3	99	45.053	ENSOARG00000002470	GNL3	99	44.349	Ovis_aries
ENSSFOG00015021228	gnl3	99	45.683	ENSPPAG00000019253	GNL3	85	48.211	Pan_paniscus
ENSSFOG00015021228	gnl3	99	44.190	ENSPPRG00000009550	GNL3	99	43.310	Panthera_pardus
ENSSFOG00015021228	gnl3	99	44.014	ENSPTIG00000009356	GNL3	99	43.134	Panthera_tigris_altaica
ENSSFOG00015021228	gnl3	99	45.683	ENSPTRG00000015009	GNL3	85	48.211	Pan_troglodytes
ENSSFOG00015021228	gnl3	99	43.162	ENSPANG00000016579	GNL3	99	42.355	Papio_anubis
ENSSFOG00015021228	gnl3	100	67.089	ENSPKIG00000024295	gnl3	100	67.269	Paramormyrops_kingsleyae
ENSSFOG00015021228	gnl3	98	48.043	ENSPSIG00000011486	GNL3	99	47.197	Pelodiscus_sinensis
ENSSFOG00015021228	gnl3	99	56.648	ENSPMGG00000008210	gnl3	99	56.648	Periophthalmus_magnuspinnatus
ENSSFOG00015021228	gnl3	99	45.633	ENSPEMG00000017577	Gnl3	99	45.357	Peromyscus_maniculatus_bairdii
ENSSFOG00015021228	gnl3	86	50.000	ENSPCIG00000018642	GNL3	83	49.574	Phascolarctos_cinereus
ENSSFOG00015021228	gnl3	100	56.206	ENSPFOG00000017601	gnl3	100	56.172	Poecilia_formosa
ENSSFOG00015021228	gnl3	100	58.781	ENSPLAG00000016968	gnl3	100	58.602	Poecilia_latipinna
ENSSFOG00015021228	gnl3	99	56.272	ENSPMEG00000018775	gnl3	99	54.676	Poecilia_mexicana
ENSSFOG00015021228	gnl3	99	55.296	ENSPREG00000002909	gnl3	99	52.669	Poecilia_reticulata
ENSSFOG00015021228	gnl3	99	44.662	ENSPPYG00000013800	GNL3	99	42.782	Pongo_abelii
ENSSFOG00015021228	gnl3	80	49.776	ENSPCAG00000002006	GNL3	81	49.776	Procavia_capensis
ENSSFOG00015021228	gnl3	99	44.685	ENSPCOG00000026637	GNL3	99	44.803	Propithecus_coquereli
ENSSFOG00015021228	gnl3	99	45.310	ENSPVAG00000012586	GNL3	85	50.210	Pteropus_vampyrus
ENSSFOG00015021228	gnl3	90	56.619	ENSPNYG00000005130	gnl3	94	58.105	Pundamilia_nyererei
ENSSFOG00015021228	gnl3	99	52.548	ENSPNAG00000013096	gnl3	99	53.274	Pygocentrus_nattereri
ENSSFOG00015021228	gnl3	99	43.058	ENSRNOG00000028461	Gnl3	99	44.974	Rattus_norvegicus
ENSSFOG00015021228	gnl3	99	44.227	ENSRBIG00000031778	GNL3	99	43.058	Rhinopithecus_bieti
ENSSFOG00015021228	gnl3	99	44.227	ENSRROG00000030086	GNL3	99	43.058	Rhinopithecus_roxellana
ENSSFOG00015021228	gnl3	99	45.504	ENSSBOG00000019990	GNL3	99	44.784	Saimiri_boliviensis_boliviensis
ENSSFOG00015021228	gnl3	85	50.000	ENSSHAG00000006141	GNL3	99	46.499	Sarcophilus_harrisii
ENSSFOG00015021228	gnl3	100	57.989	ENSSMAG00000006662	gnl3	100	57.679	Scophthalmus_maximus
ENSSFOG00015021228	gnl3	100	59.292	ENSSDUG00000000972	gnl3	100	59.213	Seriola_dumerili
ENSSFOG00015021228	gnl3	100	59.220	ENSSLDG00000008692	gnl3	92	59.213	Seriola_lalandi_dorsalis
ENSSFOG00015021228	gnl3	85	46.398	ENSSARG00000002226	GNL3	87	46.398	Sorex_araneus
ENSSFOG00015021228	gnl3	99	49.120	ENSSPUG00000003582	GNL3	99	48.951	Sphenodon_punctatus
ENSSFOG00015021228	gnl3	100	58.824	ENSSPAG00000020180	gnl3	100	58.318	Stegastes_partitus
ENSSFOG00015021228	gnl3	99	44.523	ENSSSCG00000011449	GNL3	99	44.700	Sus_scrofa
ENSSFOG00015021228	gnl3	99	47.048	ENSTGUG00000005774	GNL3	99	47.585	Taeniopygia_guttata
ENSSFOG00015021228	gnl3	100	52.236	ENSTRUG00000005552	gnl3	100	52.509	Takifugu_rubripes
ENSSFOG00015021228	gnl3	100	55.914	ENSTNIG00000007263	gnl3	100	56.194	Tetraodon_nigroviridis
ENSSFOG00015021228	gnl3	82	46.638	ENSTBEG00000017518	GNL3	85	46.638	Tupaia_belangeri
ENSSFOG00015021228	gnl3	99	45.246	ENSUAMG00000012347	GNL3	99	45.213	Ursus_americanus
ENSSFOG00015021228	gnl3	99	45.246	ENSUMAG00000021001	GNL3	99	45.213	Ursus_maritimus
ENSSFOG00015021228	gnl3	99	43.986	ENSVVUG00000024536	-	99	43.134	Vulpes_vulpes
ENSSFOG00015021228	gnl3	81	60.889	ENSXCOG00000018425	gnl3	96	60.889	Xiphophorus_couchianus
ENSSFOG00015021228	gnl3	100	57.092	ENSXMAG00000022565	gnl3	100	56.912	Xiphophorus_maculatus