EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021238 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482 (1 of many)
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 15948 bases
Position: chrKV411038.1:714774-730721
Accession: 108933588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033284	zf-met	PF12874.7	1.4e-15	1	2
ENSSFOP00015033284	zf-met	PF12874.7	1.4e-15	2	2
ENSSFOP00015033292	zf-met	PF12874.7	1.8e-15	1	2
ENSSFOP00015033292	zf-met	PF12874.7	1.8e-15	2	2
ENSSFOP00015033284	zf-C2H2_jaz	PF12171.8	6.1e-10	1	1
ENSSFOP00015033292	zf-C2H2_jaz	PF12171.8	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033659	-	567	-	ENSSFOP00015033292	188 (aa)	-	-
ENSSFOT00015033649	-	454	XM_018750766	ENSSFOP00015033284	148 (aa)	XP_018606282	-

Gene Model

Click here to download ENSSFOG00015021238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021238	zgc:171482	80	72.034	ENSSFOG00015013158	zmat4	83	66.912
ENSSFOG00015021238	zgc:171482	82	84.426	ENSSFOG00015016149	zgc:171482	98	84.426
ENSSFOG00015021238	zgc:171482	76	66.964	ENSSFOG00015015440	zmat4b	91	66.964
ENSSFOG00015021238	zgc:171482	66	49.495	ENSSFOG00015010306	znf346	63	49.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021238	zgc:171482	78	90.517	ENSAPOG00000019970	zgc:171482	87	83.846	Acanthochromis_polyacanthus
ENSSFOG00015021238	zgc:171482	78	90.517	ENSACIG00000021512	zgc:171482	87	90.517	Amphilophus_citrinellus
ENSSFOG00015021238	zgc:171482	78	90.517	ENSAOCG00000000751	zgc:171482	85	90.517	Amphiprion_ocellaris
ENSSFOG00015021238	zgc:171482	78	90.517	ENSAPEG00000014154	zgc:171482	83	90.517	Amphiprion_percula
ENSSFOG00015021238	zgc:171482	78	88.696	ENSATEG00000001371	zgc:171482	79	83.465	Anabas_testudineus
ENSSFOG00015021238	zgc:171482	78	91.379	ENSACLG00000010511	zgc:171482	90	84.615	Astatotilapia_calliptera
ENSSFOG00015021238	zgc:171482	80	90.756	ENSAMXG00000002299	zgc:171482	92	90.083	Astyanax_mexicanus
ENSSFOG00015021238	zgc:171482	78	87.826	ENSCSEG00000006509	zgc:171482	75	87.826	Cynoglossus_semilaevis
ENSSFOG00015021238	zgc:171482	78	89.655	ENSCVAG00000013606	zgc:171482	88	89.655	Cyprinodon_variegatus
ENSSFOG00015021238	zgc:171482	88	86.923	ENSDARG00000074415	zgc:171482	90	90.833	Danio_rerio
ENSSFOG00015021238	zgc:171482	80	73.950	ENSELUG00000017517	-	60	86.667	Esox_lucius
ENSSFOG00015021238	zgc:171482	81	86.667	ENSELUG00000021817	zgc:171482	86	86.667	Esox_lucius
ENSSFOG00015021238	zgc:171482	78	89.565	ENSFHEG00000002233	zgc:171482	82	89.565	Fundulus_heteroclitus
ENSSFOG00015021238	zgc:171482	80	88.235	ENSGMOG00000010508	zgc:171482	79	88.235	Gadus_morhua
ENSSFOG00015021238	zgc:171482	78	90.517	ENSGAFG00000009398	zgc:171482	76	90.517	Gambusia_affinis
ENSSFOG00015021238	zgc:171482	80	89.076	ENSGACG00000007680	zgc:171482	80	89.076	Gasterosteus_aculeatus
ENSSFOG00015021238	zgc:171482	78	91.379	ENSHBUG00000023289	zgc:171482	98	83.846	Haplochromis_burtoni
ENSSFOG00015021238	zgc:171482	91	82.222	ENSHCOG00000018086	zgc:171482	97	82.222	Hippocampus_comes
ENSSFOG00015021238	zgc:171482	80	91.597	ENSIPUG00000000361	zgc:171482	88	90.909	Ictalurus_punctatus
ENSSFOG00015021238	zgc:171482	88	81.618	ENSKMAG00000005077	zgc:171482	75	80.597	Kryptolebias_marmoratus
ENSSFOG00015021238	zgc:171482	78	89.655	ENSLBEG00000023823	zgc:171482	83	89.655	Labrus_bergylta
ENSSFOG00015021238	zgc:171482	81	90.833	ENSLOCG00000008863	zgc:171482	77	88.462	Lepisosteus_oculatus
ENSSFOG00015021238	zgc:171482	98	74.172	ENSMAMG00000001031	zgc:171482	79	84.921	Mastacembelus_armatus
ENSSFOG00015021238	zgc:171482	78	88.793	ENSMZEG00005027721	zgc:171482	79	88.793	Maylandia_zebra
ENSSFOG00015021238	zgc:171482	78	91.379	ENSMMOG00000010523	zgc:171482	89	91.379	Mola_mola
ENSSFOG00015021238	zgc:171482	78	89.655	ENSMALG00000017883	zgc:171482	80	85.156	Monopterus_albus
ENSSFOG00015021238	zgc:171482	78	90.517	ENSNBRG00000021035	zgc:171482	87	90.517	Neolamprologus_brichardi
ENSSFOG00015021238	zgc:171482	87	83.582	ENSONIG00000018365	zgc:171482	78	83.582	Oreochromis_niloticus
ENSSFOG00015021238	zgc:171482	78	90.435	ENSORLG00000007607	zgc:171482	88	90.435	Oryzias_latipes
ENSSFOG00015021238	zgc:171482	78	90.435	ENSORLG00020003563	zgc:171482	94	81.203	Oryzias_latipes_hni
ENSSFOG00015021238	zgc:171482	78	90.435	ENSORLG00015008552	zgc:171482	88	90.435	Oryzias_latipes_hsok
ENSSFOG00015021238	zgc:171482	80	88.235	ENSOMEG00000003526	zgc:171482	87	86.179	Oryzias_melastigma
ENSSFOG00015021238	zgc:171482	74	91.818	ENSPKIG00000016244	zgc:171482	90	84.921	Paramormyrops_kingsleyae
ENSSFOG00015021238	zgc:171482	83	89.516	ENSPKIG00000015911	-	94	85.294	Paramormyrops_kingsleyae
ENSSFOG00015021238	zgc:171482	95	80.282	ENSPMGG00000020230	zgc:171482	82	80.282	Periophthalmus_magnuspinnatus
ENSSFOG00015021238	zgc:171482	92	80.282	ENSPFOG00000001974	zgc:171482	78	81.818	Poecilia_formosa
ENSSFOG00015021238	zgc:171482	78	90.517	ENSPLAG00000003327	zgc:171482	87	90.517	Poecilia_latipinna
ENSSFOG00015021238	zgc:171482	78	90.517	ENSPMEG00000004988	zgc:171482	87	86.325	Poecilia_mexicana
ENSSFOG00015021238	zgc:171482	78	90.517	ENSPREG00000019241	zgc:171482	91	85.714	Poecilia_reticulata
ENSSFOG00015021238	zgc:171482	78	91.379	ENSPNYG00000007773	zgc:171482	90	84.615	Pundamilia_nyererei
ENSSFOG00015021238	zgc:171482	78	91.304	ENSPNAG00000007619	zgc:171482	79	84.058	Pygocentrus_nattereri
ENSSFOG00015021238	zgc:171482	80	88.235	ENSSMAG00000002715	zgc:171482	79	86.179	Scophthalmus_maximus
ENSSFOG00015021238	zgc:171482	91	81.159	ENSSDUG00000008773	zgc:171482	97	81.159	Seriola_dumerili
ENSSFOG00015021238	zgc:171482	91	81.159	ENSSLDG00000019510	zgc:171482	97	81.159	Seriola_lalandi_dorsalis
ENSSFOG00015021238	zgc:171482	78	90.517	ENSSPAG00000013724	zgc:171482	92	90.517	Stegastes_partitus
ENSSFOG00015021238	zgc:171482	78	89.565	ENSTRUG00000005705	zgc:171482	68	89.565	Takifugu_rubripes
ENSSFOG00015021238	zgc:171482	89	60.294	ENSTNIG00000008679	zgc:171482	80	60.294	Tetraodon_nigroviridis
ENSSFOG00015021238	zgc:171482	78	70.312	ENSXETG00000013525	zmat4	83	79.245	Xenopus_tropicalis
ENSSFOG00015021238	zgc:171482	78	85.470	ENSXMAG00000002641	zgc:171482	75	85.470	Xiphophorus_maculatus