EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021291 (Gene tree)
Gene ID: 108939915
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9905 bases
Position: chrKV411197.1:235762-245666
Accession: 108939915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033382	zf-C2H2	PF00096.26	5.9e-35	1	7
ENSSFOP00015033382	zf-C2H2	PF00096.26	5.9e-35	2	7
ENSSFOP00015033382	zf-C2H2	PF00096.26	5.9e-35	3	7
ENSSFOP00015033382	zf-C2H2	PF00096.26	5.9e-35	4	7
ENSSFOP00015033382	zf-C2H2	PF00096.26	5.9e-35	5	7
ENSSFOP00015033382	zf-C2H2	PF00096.26	5.9e-35	6	7
ENSSFOP00015033382	zf-C2H2	PF00096.26	5.9e-35	7	7
ENSSFOP00015033382	zf-met	PF12874.7	1.5e-09	1	1
ENSSFOP00015033382	zf-C2H2_jaz	PF12171.8	2.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033749	-	2025	XM_018761586	ENSSFOP00015033382	674 (aa)	XP_018617102	-

Gene Model

Click here to download ENSSFOG00015021291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021291	e4f1	54	36.364	ENSSFOG00015015427	znf366	52	36.364
ENSSFOG00015021291	e4f1	63	37.662	ENSSFOG00015008994	znf236	74	37.662
ENSSFOG00015021291	e4f1	61	40.000	ENSSFOG00015010128	ZNF521	58	37.975
ENSSFOG00015021291	e4f1	56	40.127	ENSSFOG00015009678	-	58	39.552
ENSSFOG00015021291	e4f1	62	35.404	ENSSFOG00015019818	-	75	39.744
ENSSFOG00015021291	e4f1	58	40.000	ENSSFOG00015006083	-	56	40.000
ENSSFOG00015021291	e4f1	56	38.961	ENSSFOG00015004737	si:dkey-89b17.4	57	37.349
ENSSFOG00015021291	e4f1	76	41.104	ENSSFOG00015015384	-	85	40.426
ENSSFOG00015021291	e4f1	65	40.179	ENSSFOG00015015878	-	91	44.444
ENSSFOG00015021291	e4f1	64	40.000	ENSSFOG00015020993	-	83	50.000
ENSSFOG00015021291	e4f1	58	41.509	ENSSFOG00015000652	ZNF775	83	32.692
ENSSFOG00015021291	e4f1	69	39.130	ENSSFOG00015020478	prdm5	63	39.130
ENSSFOG00015021291	e4f1	70	33.784	ENSSFOG00015017155	-	92	31.868
ENSSFOG00015021291	e4f1	58	42.105	ENSSFOG00015015958	-	55	42.105
ENSSFOG00015021291	e4f1	57	40.491	ENSSFOG00015010829	-	73	40.491
ENSSFOG00015021291	e4f1	54	41.718	ENSSFOG00015021831	-	68	41.718
ENSSFOG00015021291	e4f1	58	40.244	ENSSFOG00015006108	-	71	40.244
ENSSFOG00015021291	e4f1	58	40.606	ENSSFOG00015013448	-	85	39.759
ENSSFOG00015021291	e4f1	57	32.000	ENSSFOG00015013930	PRDM15	72	32.000
ENSSFOG00015021291	e4f1	74	36.872	ENSSFOG00015012089	ZNF319	88	36.872
ENSSFOG00015021291	e4f1	55	32.317	ENSSFOG00015004064	-	53	31.522
ENSSFOG00015021291	e4f1	54	46.377	ENSSFOG00015008577	-	99	38.000
ENSSFOG00015021291	e4f1	83	38.788	ENSSFOG00015003121	znf668	83	38.788
ENSSFOG00015021291	e4f1	71	45.098	ENSSFOG00015009159	SALL3	53	45.652
ENSSFOG00015021291	e4f1	50	45.652	ENSSFOG00015012223	sall3a	53	45.652
ENSSFOG00015021291	e4f1	57	41.071	ENSSFOG00015014678	znf341	55	41.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021291	e4f1	99	60.131	ENSCSEG00000015852	e4f1	89	60.131	Cynoglossus_semilaevis
ENSSFOG00015021291	e4f1	99	53.228	ENSCVAG00000002788	e4f1	99	53.623	Cyprinodon_variegatus
ENSSFOG00015021291	e4f1	69	48.519	ENSEBUG00000016435	e4f1	76	47.126	Eptatretus_burgeri
ENSSFOG00015021291	e4f1	99	47.759	ENSFHEG00000022551	e4f1	97	46.438	Fundulus_heteroclitus
ENSSFOG00015021291	e4f1	82	59.296	ENSGMOG00000011409	e4f1	95	59.296	Gadus_morhua
ENSSFOG00015021291	e4f1	99	56.653	ENSGACG00000011808	e4f1	99	56.868	Gasterosteus_aculeatus
ENSSFOG00015021291	e4f1	96	50.863	ENSHCOG00000016455	e4f1	97	51.053	Hippocampus_comes
ENSSFOG00015021291	e4f1	99	52.875	ENSIPUG00000005379	e4f1	99	53.436	Ictalurus_punctatus
ENSSFOG00015021291	e4f1	98	58.991	ENSLBEG00000026373	e4f1	99	52.949	Labrus_bergylta
ENSSFOG00015021291	e4f1	99	56.860	ENSMMOG00000007612	e4f1	99	57.426	Mola_mola
ENSSFOG00015021291	e4f1	99	52.487	ENSMALG00000007314	e4f1	99	53.255	Monopterus_albus
ENSSFOG00015021291	e4f1	98	60.089	ENSORLG00000009160	e4f1	99	52.742	Oryzias_latipes
ENSSFOG00015021291	e4f1	99	59.341	ENSORLG00020017974	e4f1	89	60.841	Oryzias_latipes_hni
ENSSFOG00015021291	e4f1	99	59.251	ENSORLG00015007385	e4f1	89	60.659	Oryzias_latipes_hsok
ENSSFOG00015021291	e4f1	99	52.618	ENSOMEG00000012220	e4f1	99	53.473	Oryzias_melastigma
ENSSFOG00015021291	e4f1	99	69.377	ENSPKIG00000001942	e4f1	99	68.767	Paramormyrops_kingsleyae
ENSSFOG00015021291	e4f1	68	86.111	ENSPMGG00000020527	e4f1	93	59.392	Periophthalmus_magnuspinnatus
ENSSFOG00015021291	e4f1	98	60.217	ENSSMAG00000014720	e4f1	99	54.054	Scophthalmus_maximus
ENSSFOG00015021291	e4f1	97	49.732	ENSSPUG00000011420	E4F1	98	49.546	Sphenodon_punctatus
ENSSFOG00015021291	e4f1	98	58.209	ENSTRUG00000005176	e4f1	99	49.937	Takifugu_rubripes
ENSSFOG00015021291	e4f1	95	51.622	ENSTNIG00000018001	e4f1	99	52.497	Tetraodon_nigroviridis
ENSSFOG00015021291	e4f1	95	40.636	ENSXETG00000016091	e4f1	99	72.381	Xenopus_tropicalis