EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021404 (Gene tree)
Gene ID: 108922241
Gene Symbol: ddx61
Alias: fk48d07|p54b|si:ch211-175g6.7|wu:fk48d07
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 9830 bases
Position: chrKV410812.1:678500-688329
Accession: 108922241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033543	DEAD	PF00270.29	9.5e-41	1	1
ENSSFOP00015033560	DEAD	PF00270.29	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033937	-	1419	-	ENSSFOP00015033560	472 (aa)	-	-
ENSSFOT00015033920	-	6644	XM_018732262	ENSSFOP00015033543	494 (aa)	XP_018587778	A0A1W4YHG1

Gene Model

Click here to download ENSSFOG00015021404's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021404	ddx61	66	43.137	ENSSFOG00015014476	ddx1	52	43.137
ENSSFOG00015021404	ddx61	74	31.915	ENSSFOG00015012193	ddx43	58	31.915
ENSSFOG00015021404	ddx61	75	39.516	ENSSFOG00015007526	EIF4A2	90	39.837
ENSSFOG00015021404	ddx61	67	33.628	ENSSFOG00015013052	-	74	32.333
ENSSFOG00015021404	ddx61	97	80.285	ENSSFOG00015023211	ddx6	98	81.875
ENSSFOG00015021404	ddx61	71	36.813	ENSSFOG00015020543	ddx19	76	36.813
ENSSFOG00015021404	ddx61	76	37.867	ENSSFOG00015022017	eif4a3	91	37.867
ENSSFOG00015021404	ddx61	79	47.179	ENSSFOG00015005998	DDX6	94	46.736
ENSSFOG00015021404	ddx61	75	30.846	ENSSFOG00015022312	ddx3xa	57	30.846
ENSSFOG00015021404	ddx61	78	33.166	ENSSFOG00015008354	ddx20	51	33.166
ENSSFOG00015021404	ddx61	76	31.746	ENSSFOG00015013392	ddx47	80	31.746
ENSSFOG00015021404	ddx61	73	31.536	ENSSFOG00015003999	ddx59	61	31.536
ENSSFOG00015021404	ddx61	76	36.316	ENSSFOG00015005701	DDX39A	89	36.316
ENSSFOG00015021404	ddx61	69	30.726	ENSSFOG00015006531	ddx4	55	30.726
ENSSFOG00015021404	ddx61	78	30.457	ENSSFOG00015002951	-	53	30.457
ENSSFOG00015021404	ddx61	80	37.965	ENSSFOG00015022690	eif4a1b	98	38.250
ENSSFOG00015021404	ddx61	75	32.126	ENSSFOG00015013273	ddx23	51	32.134
ENSSFOG00015021404	ddx61	76	36.579	ENSSFOG00015016107	ddx39b	87	36.579
ENSSFOG00015021404	ddx61	80	36.000	ENSSFOG00015007928	ddx39a	93	36.000
ENSSFOG00015021404	ddx61	69	31.356	ENSSFOG00015004961	DDX5	66	30.769
ENSSFOG00015021404	ddx61	76	37.600	ENSSFOG00015004896	-	91	37.600
ENSSFOG00015021404	ddx61	71	33.056	ENSSFOG00015012308	ddx17	53	33.056
ENSSFOG00015021404	ddx61	67	30.114	ENSSFOG00015017496	ddx55	58	30.114
ENSSFOG00015021404	ddx61	73	30.645	ENSSFOG00015005055	ddx52	66	30.645
ENSSFOG00015021404	ddx61	75	39.516	ENSSFOG00015000931	-	91	39.837
ENSSFOG00015021404	ddx61	74	31.218	ENSSFOG00015007587	-	58	31.218
ENSSFOG00015021404	ddx61	74	32.447	ENSSFOG00015021150	ddx49	75	33.148
ENSSFOG00015021404	ddx61	75	38.947	ENSSFOG00015013858	eif4a2	94	39.257
ENSSFOG00015021404	ddx61	67	32.647	ENSSFOG00015003802	ddx5	54	32.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021404	ddx61	98	86.128	ENSAPOG00000014829	ddx61	96	86.526	Acanthochromis_polyacanthus
ENSSFOG00015021404	ddx61	75	93.280	ENSAPOG00000023627	-	90	96.328	Acanthochromis_polyacanthus
ENSSFOG00015021404	ddx61	97	81.705	ENSACIG00000018355	-	96	82.278	Amphilophus_citrinellus
ENSSFOG00015021404	ddx61	99	87.755	ENSAOCG00000006269	-	96	89.831	Amphiprion_ocellaris
ENSSFOG00015021404	ddx61	98	86.749	ENSAOCG00000007627	ddx61	96	87.158	Amphiprion_ocellaris
ENSSFOG00015021404	ddx61	98	86.749	ENSAPEG00000007293	ddx61	96	87.158	Amphiprion_percula
ENSSFOG00015021404	ddx61	99	87.755	ENSAPEG00000021368	-	96	89.831	Amphiprion_percula
ENSSFOG00015021404	ddx61	99	87.755	ENSAPEG00000020642	-	96	89.831	Amphiprion_percula
ENSSFOG00015021404	ddx61	96	86.792	ENSATEG00000011302	ddx61	99	85.477	Anabas_testudineus
ENSSFOG00015021404	ddx61	99	86.939	ENSATEG00000005424	-	96	88.819	Anabas_testudineus
ENSSFOG00015021404	ddx61	97	87.552	ENSACLG00000027620	ddx61	98	88.211	Astatotilapia_calliptera
ENSSFOG00015021404	ddx61	97	88.773	ENSACLG00000003260	-	97	89.451	Astatotilapia_calliptera
ENSSFOG00015021404	ddx61	98	87.835	ENSAMXG00000033980	-	96	89.030	Astyanax_mexicanus
ENSSFOG00015021404	ddx61	96	87.395	ENSAMXG00000032542	ddx61	97	87.342	Astyanax_mexicanus
ENSSFOG00015021404	ddx61	99	88.163	ENSCSEG00000009893	-	96	90.084	Cynoglossus_semilaevis
ENSSFOG00015021404	ddx61	99	86.735	ENSCVAG00000011006	-	96	88.397	Cyprinodon_variegatus
ENSSFOG00015021404	ddx61	97	87.866	ENSDARG00000018425	ddx61	97	87.975	Danio_rerio
ENSSFOG00015021404	ddx61	99	87.347	ENSELUG00000022538	-	96	89.241	Esox_lucius
ENSSFOG00015021404	ddx61	98	88.454	ENSELUG00000020545	ddx61	96	89.451	Esox_lucius
ENSSFOG00015021404	ddx61	99	87.910	ENSFHEG00000015487	-	96	89.831	Fundulus_heteroclitus
ENSSFOG00015021404	ddx61	66	82.927	ENSGMOG00000003561	-	100	82.831	Gadus_morhua
ENSSFOG00015021404	ddx61	96	86.307	ENSGMOG00000013762	ddx61	98	86.279	Gadus_morhua
ENSSFOG00015021404	ddx61	99	87.398	ENSGAFG00000015865	-	95	89.619	Gambusia_affinis
ENSSFOG00015021404	ddx61	97	84.413	ENSGACG00000003401	ddx61	98	85.010	Gasterosteus_aculeatus
ENSSFOG00015021404	ddx61	98	86.653	ENSGACG00000002413	-	97	88.445	Gasterosteus_aculeatus
ENSSFOG00015021404	ddx61	97	88.773	ENSHBUG00000017033	-	97	89.451	Haplochromis_burtoni
ENSSFOG00015021404	ddx61	97	87.759	ENSHBUG00000017832	ddx61	98	88.421	Haplochromis_burtoni
ENSSFOG00015021404	ddx61	99	85.163	ENSHCOG00000012238	-	96	87.315	Hippocampus_comes
ENSSFOG00015021404	ddx61	99	82.353	ENSHCOG00000008184	ddx61	96	84.746	Hippocampus_comes
ENSSFOG00015021404	ddx61	98	85.331	ENSIPUG00000008367	-	98	86.287	Ictalurus_punctatus
ENSSFOG00015021404	ddx61	96	86.709	ENSIPUG00000012823	DDX6	97	86.709	Ictalurus_punctatus
ENSSFOG00015021404	ddx61	97	88.773	ENSKMAG00000007213	-	96	89.619	Kryptolebias_marmoratus
ENSSFOG00015021404	ddx61	98	86.094	ENSLBEG00000001740	ddx61	97	86.458	Labrus_bergylta
ENSSFOG00015021404	ddx61	99	87.018	ENSLBEG00000016890	-	96	88.866	Labrus_bergylta
ENSSFOG00015021404	ddx61	97	84.504	ENSLACG00000015214	ddx61	98	85.084	Latimeria_chalumnae
ENSSFOG00015021404	ddx61	98	53.219	ENSLOCG00000004352	ddx61	88	78.906	Lepisosteus_oculatus
ENSSFOG00015021404	ddx61	99	87.551	ENSMAMG00000005559	-	96	89.241	Mastacembelus_armatus
ENSSFOG00015021404	ddx61	97	86.848	ENSMAMG00000005321	ddx61	96	87.158	Mastacembelus_armatus
ENSSFOG00015021404	ddx61	97	88.773	ENSMZEG00005026268	-	97	89.451	Maylandia_zebra
ENSSFOG00015021404	ddx61	97	87.759	ENSMZEG00005003556	ddx61	98	88.421	Maylandia_zebra
ENSSFOG00015021404	ddx61	96	85.924	ENSMMOG00000007415	ddx61	97	85.895	Mola_mola
ENSSFOG00015021404	ddx61	99	78.571	ENSMMOG00000013694	-	96	80.169	Mola_mola
ENSSFOG00015021404	ddx61	71	75.071	ENSMMOG00000008825	-	92	75.071	Mola_mola
ENSSFOG00015021404	ddx61	98	75.154	ENSMALG00000013776	ddx61	95	75.574	Monopterus_albus
ENSSFOG00015021404	ddx61	99	87.755	ENSMALG00000013817	-	96	89.831	Monopterus_albus
ENSSFOG00015021404	ddx61	97	82.121	ENSNBRG00000015075	-	96	82.700	Neolamprologus_brichardi
ENSSFOG00015021404	ddx61	97	80.083	ENSNBRG00000015800	ddx61	98	80.632	Neolamprologus_brichardi
ENSSFOG00015021404	ddx61	97	88.981	ENSONIG00000013748	-	97	89.662	Oreochromis_niloticus
ENSSFOG00015021404	ddx61	97	87.344	ENSONIG00000011418	ddx61	98	88.000	Oreochromis_niloticus
ENSSFOG00015021404	ddx61	99	86.735	ENSORLG00000009178	-	97	88.584	Oryzias_latipes
ENSSFOG00015021404	ddx61	99	87.143	ENSORLG00020015515	-	97	89.006	Oryzias_latipes_hni
ENSSFOG00015021404	ddx61	97	88.150	ENSORLG00015006764	-	97	88.795	Oryzias_latipes_hsok
ENSSFOG00015021404	ddx61	96	80.042	ENSOMEG00000022326	-	98	80.338	Oryzias_melastigma
ENSSFOG00015021404	ddx61	96	93.067	ENSPKIG00000024264	ddx61	97	93.038	Paramormyrops_kingsleyae
ENSSFOG00015021404	ddx61	98	80.206	ENSPMGG00000013355	-	96	80.462	Periophthalmus_magnuspinnatus
ENSSFOG00015021404	ddx61	99	87.551	ENSPFOG00000005750	-	96	89.831	Poecilia_formosa
ENSSFOG00015021404	ddx61	99	87.551	ENSPLAG00000000403	-	96	89.831	Poecilia_latipinna
ENSSFOG00015021404	ddx61	99	87.551	ENSPMEG00000023737	-	96	89.831	Poecilia_mexicana
ENSSFOG00015021404	ddx61	97	88.773	ENSPNYG00000003986	-	97	89.451	Pundamilia_nyererei
ENSSFOG00015021404	ddx61	97	81.503	ENSPNYG00000015045	ddx61	98	82.031	Pundamilia_nyererei
ENSSFOG00015021404	ddx61	99	88.320	ENSPNAG00000008742	-	96	90.084	Pygocentrus_nattereri
ENSSFOG00015021404	ddx61	97	87.083	ENSPNAG00000024072	ddx61	98	87.553	Pygocentrus_nattereri
ENSSFOG00015021404	ddx61	96	86.681	ENSSMAG00000006591	ddx61	96	85.865	Scophthalmus_maximus
ENSSFOG00015021404	ddx61	99	87.169	ENSSMAG00000001793	-	96	89.429	Scophthalmus_maximus
ENSSFOG00015021404	ddx61	96	87.738	ENSSDUG00000009713	ddx61	96	87.368	Seriola_dumerili
ENSSFOG00015021404	ddx61	99	87.576	ENSSDUG00000007530	-	96	89.263	Seriola_dumerili
ENSSFOG00015021404	ddx61	99	87.576	ENSSLDG00000007608	-	96	89.263	Seriola_lalandi_dorsalis
ENSSFOG00015021404	ddx61	96	88.161	ENSSLDG00000000132	ddx61	96	87.789	Seriola_lalandi_dorsalis
ENSSFOG00015021404	ddx61	96	87.924	ENSSPAG00000001578	ddx61	96	87.553	Stegastes_partitus
ENSSFOG00015021404	ddx61	99	88.367	ENSSPAG00000013878	-	96	90.275	Stegastes_partitus
ENSSFOG00015021404	ddx61	99	85.918	ENSTRUG00000012432	-	96	87.553	Takifugu_rubripes
ENSSFOG00015021404	ddx61	97	87.942	ENSTNIG00000003560	-	98	88.397	Tetraodon_nigroviridis
ENSSFOG00015021404	ddx61	99	78.659	ENSXCOG00000001406	-	95	80.508	Xiphophorus_couchianus
ENSSFOG00015021404	ddx61	99	87.602	ENSXMAG00000016090	-	95	89.831	Xiphophorus_maculatus