EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021448 (Gene tree)
Gene ID: 108925129
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 3461 bases
Position: chrKV410840.1:433138-436598
Accession: 108925129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033604	MMR_HSR1	PF01926.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015033981	-	630	XM_018736890	ENSSFOP00015033604	209 (aa)	XP_018592406	A0A1W4YVT7

Gene Model

Click here to download ENSSFOG00015021448's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021448	-	97	34.634	ENSSFOG00015009244	rab39bb	97	34.634
ENSSFOG00015021448	-	98	40.191	ENSSFOG00015009042	rab11bb	96	40.191
ENSSFOG00015021448	-	73	38.961	ENSSFOG00015019202	RAB6B	74	38.961
ENSSFOG00015021448	-	78	42.073	ENSSFOG00015011318	-	76	42.073
ENSSFOG00015021448	-	98	39.614	ENSSFOG00015003628	-	97	39.614
ENSSFOG00015021448	-	76	46.541	ENSSFOG00015015034	rab2a	75	46.541
ENSSFOG00015021448	-	73	40.260	ENSSFOG00015004941	rab41	72	40.260
ENSSFOG00015021448	-	73	39.610	ENSSFOG00015011268	RAB41	73	39.610
ENSSFOG00015021448	-	95	35.437	ENSSFOG00015004325	rab34a	79	35.437
ENSSFOG00015021448	-	81	34.302	ENSSFOG00015011157	-	88	34.302
ENSSFOG00015021448	-	96	37.811	ENSSFOG00015009988	-	89	37.811
ENSSFOG00015021448	-	99	53.140	ENSSFOG00015020836	rab1ba	99	53.140
ENSSFOG00015021448	-	74	33.117	ENSSFOG00015012604	rab23	78	33.125
ENSSFOG00015021448	-	74	32.919	ENSSFOG00015017512	dnajc27	59	32.919
ENSSFOG00015021448	-	75	34.810	ENSSFOG00015006846	-	96	31.868
ENSSFOG00015021448	-	81	34.302	ENSSFOG00015003051	hrasb	95	33.333
ENSSFOG00015021448	-	99	70.048	ENSSFOG00015006076	rab35	99	70.048
ENSSFOG00015021448	-	86	38.122	ENSSFOG00015015336	rab4a	85	38.122
ENSSFOG00015021448	-	83	48.295	ENSSFOG00015021754	rab13	88	48.295
ENSSFOG00015021448	-	98	39.904	ENSSFOG00015008618	rab11al	96	39.904
ENSSFOG00015021448	-	87	36.216	ENSSFOG00015024034	rab33ba	91	36.216
ENSSFOG00015021448	-	83	36.872	ENSSFOG00015020012	rab7a	86	36.872
ENSSFOG00015021448	-	76	46.541	ENSSFOG00015000865	-	83	46.795
ENSSFOG00015021448	-	77	44.311	ENSSFOG00015020112	rab33b	77	44.311
ENSSFOG00015021448	-	98	32.857	ENSSFOG00015006245	-	96	32.857
ENSSFOG00015021448	-	56	30.833	ENSSFOG00015020603	arl4aa	60	30.833
ENSSFOG00015021448	-	97	41.667	ENSSFOG00015024042	rab11a	95	41.667
ENSSFOG00015021448	-	77	63.975	ENSSFOG00015001293	rab1ab	80	63.975
ENSSFOG00015021448	-	78	46.386	ENSSFOG00015017444	rab18a	73	44.693
ENSSFOG00015021448	-	95	33.981	ENSSFOG00015005188	rab34	79	33.981
ENSSFOG00015021448	-	77	40.000	ENSSFOG00015002077	rab6a	79	40.000
ENSSFOG00015021448	-	80	37.572	ENSSFOG00015011771	-	84	37.572
ENSSFOG00015021448	-	80	41.667	ENSSFOG00015021115	-	78	41.667
ENSSFOG00015021448	-	73	34.395	ENSSFOG00015014992	rhebl1	83	34.395
ENSSFOG00015021448	-	99	51.442	ENSSFOG00015005464	zgc:171927	98	51.442
ENSSFOG00015021448	-	74	33.540	ENSSFOG00015020074	DNAJC27	59	33.540
ENSSFOG00015021448	-	83	48.851	ENSSFOG00015017296	rab15	82	48.851
ENSSFOG00015021448	-	90	44.898	ENSSFOG00015004253	rab33a	87	44.898
ENSSFOG00015021448	-	100	34.884	ENSSFOG00015003259	rab9a	94	34.884
ENSSFOG00015021448	-	79	34.320	ENSSFOG00015020319	mras	91	30.366
ENSSFOG00015021448	-	98	42.029	ENSSFOG00015008657	rab25a	96	42.029
ENSSFOG00015021448	-	78	63.190	ENSSFOG00015011140	-	80	63.190
ENSSFOG00015021448	-	92	42.564	ENSSFOG00015006175	zgc:101559	83	42.564
ENSSFOG00015021448	-	81	39.080	ENSSFOG00015016000	-	81	39.080
ENSSFOG00015021448	-	84	42.135	ENSSFOG00015020732	rab42a	84	42.135
ENSSFOG00015021448	-	78	42.073	ENSSFOG00015012785	rab14	76	42.073
ENSSFOG00015021448	-	88	32.258	ENSSFOG00015023903	KRAS	95	32.258
ENSSFOG00015021448	-	83	39.106	ENSSFOG00015012088	rab42	80	39.106
ENSSFOG00015021448	-	77	39.130	ENSSFOG00015012085	rab22a	83	39.130
ENSSFOG00015021448	-	86	34.715	ENSSFOG00015009566	si:dkey-13a21.4	94	34.715
ENSSFOG00015021448	-	81	34.637	ENSSFOG00015016156	rab36	70	34.637
ENSSFOG00015021448	-	78	33.929	ENSSFOG00015023790	rheb	88	33.929
ENSSFOG00015021448	-	87	35.829	ENSSFOG00015005076	zgc:100918	91	35.829
ENSSFOG00015021448	-	97	39.130	ENSSFOG00015018421	rab39b	97	39.130
ENSSFOG00015021448	-	100	34.884	ENSSFOG00015000053	rab9a	92	34.884
ENSSFOG00015021448	-	80	42.857	ENSSFOG00015014517	rab5a	78	42.857
ENSSFOG00015021448	-	99	78.846	ENSSFOG00015006414	-	99	78.846
ENSSFOG00015021448	-	80	36.416	ENSSFOG00015010492	rab9b	85	36.416
ENSSFOG00015021448	-	83	36.872	ENSSFOG00015021180	RAB7A	86	36.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021448	-	100	93.301	ENSAPOG00000008263	si:dkey-16l2.16	100	93.301	Acanthochromis_polyacanthus
ENSSFOG00015021448	-	100	92.823	ENSAOCG00000016825	si:dkey-16l2.16	100	92.823	Amphiprion_ocellaris
ENSSFOG00015021448	-	100	92.823	ENSAPEG00000006500	si:dkey-16l2.16	100	92.823	Amphiprion_percula
ENSSFOG00015021448	-	100	91.388	ENSATEG00000019238	si:dkey-16l2.16	100	91.388	Anabas_testudineus
ENSSFOG00015021448	-	100	92.823	ENSACLG00000018721	si:dkey-16l2.16	100	92.823	Astatotilapia_calliptera
ENSSFOG00015021448	-	100	94.258	ENSAMXG00000038243	si:dkey-16l2.16	100	94.258	Astyanax_mexicanus
ENSSFOG00015021448	-	56	95.763	ENSCSEG00000009988	si:dkey-16l2.16	90	95.763	Cynoglossus_semilaevis
ENSSFOG00015021448	-	100	91.388	ENSCVAG00000003537	si:dkey-16l2.16	100	91.388	Cyprinodon_variegatus
ENSSFOG00015021448	-	100	93.301	ENSDARG00000037967	si:dkey-16l2.16	99	96.610	Danio_rerio
ENSSFOG00015021448	-	99	88.462	ENSELUG00000023247	si:dkey-16l2.16	99	88.462	Esox_lucius
ENSSFOG00015021448	-	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSSFOG00015021448	-	77	84.472	ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	Gadus_morhua
ENSSFOG00015021448	-	100	85.646	ENSGAFG00000005388	si:dkey-16l2.16	100	85.646	Gambusia_affinis
ENSSFOG00015021448	-	100	92.344	ENSGACG00000014915	si:dkey-16l2.16	98	92.344	Gasterosteus_aculeatus
ENSSFOG00015021448	-	100	93.301	ENSHBUG00000019261	si:dkey-16l2.16	100	93.301	Haplochromis_burtoni
ENSSFOG00015021448	-	100	91.388	ENSHCOG00000006538	si:dkey-16l2.16	100	91.388	Hippocampus_comes
ENSSFOG00015021448	-	100	88.038	ENSKMAG00000003494	si:dkey-16l2.16	100	88.038	Kryptolebias_marmoratus
ENSSFOG00015021448	-	100	93.301	ENSLBEG00000007681	si:dkey-16l2.16	100	93.301	Labrus_bergylta
ENSSFOG00015021448	-	100	90.431	ENSMAMG00000019230	si:dkey-16l2.16	100	90.431	Mastacembelus_armatus
ENSSFOG00015021448	-	100	92.823	ENSMZEG00005002081	si:dkey-16l2.16	100	92.823	Maylandia_zebra
ENSSFOG00015021448	-	99	92.718	ENSMMOG00000020140	si:dkey-16l2.16	97	92.718	Mola_mola
ENSSFOG00015021448	-	100	89.952	ENSMALG00000014727	si:dkey-16l2.16	99	89.952	Monopterus_albus
ENSSFOG00015021448	-	100	92.823	ENSNBRG00000008930	si:dkey-16l2.16	100	92.823	Neolamprologus_brichardi
ENSSFOG00015021448	-	100	92.823	ENSONIG00000009443	si:dkey-16l2.16	100	92.823	Oreochromis_niloticus
ENSSFOG00015021448	-	100	87.560	ENSORLG00000001098	si:dkey-16l2.16	99	87.560	Oryzias_latipes
ENSSFOG00015021448	-	100	87.560	ENSORLG00020000867	si:dkey-16l2.16	99	87.560	Oryzias_latipes_hni
ENSSFOG00015021448	-	100	84.689	ENSOMEG00000015474	si:dkey-16l2.16	100	88.517	Oryzias_melastigma
ENSSFOG00015021448	-	100	93.780	ENSPKIG00000005686	-	100	93.780	Paramormyrops_kingsleyae
ENSSFOG00015021448	-	100	81.818	ENSPKIG00000018888	si:dkey-16l2.16	100	81.818	Paramormyrops_kingsleyae
ENSSFOG00015021448	-	100	90.431	ENSPMGG00000000751	si:dkey-16l2.16	100	90.431	Periophthalmus_magnuspinnatus
ENSSFOG00015021448	-	100	86.603	ENSPFOG00000004746	si:dkey-16l2.16	100	86.603	Poecilia_formosa
ENSSFOG00015021448	-	100	86.124	ENSPLAG00000021043	si:dkey-16l2.16	100	86.124	Poecilia_latipinna
ENSSFOG00015021448	-	100	86.603	ENSPMEG00000007165	si:dkey-16l2.16	100	86.603	Poecilia_mexicana
ENSSFOG00015021448	-	100	86.124	ENSPREG00000005323	si:dkey-16l2.16	100	86.124	Poecilia_reticulata
ENSSFOG00015021448	-	100	93.301	ENSPNYG00000009490	si:dkey-16l2.16	100	93.301	Pundamilia_nyererei
ENSSFOG00015021448	-	100	94.258	ENSPNAG00000018986	si:dkey-16l2.16	100	94.258	Pygocentrus_nattereri
ENSSFOG00015021448	-	100	89.952	ENSSMAG00000011769	si:dkey-16l2.16	94	89.952	Scophthalmus_maximus
ENSSFOG00015021448	-	100	92.344	ENSSDUG00000005719	si:dkey-16l2.16	100	92.344	Seriola_dumerili
ENSSFOG00015021448	-	100	92.344	ENSSLDG00000003631	si:dkey-16l2.16	100	92.344	Seriola_lalandi_dorsalis
ENSSFOG00015021448	-	100	92.823	ENSSPAG00000006302	si:dkey-16l2.16	100	92.823	Stegastes_partitus
ENSSFOG00015021448	-	100	91.866	ENSTRUG00000025076	si:dkey-16l2.16	100	91.866	Takifugu_rubripes
ENSSFOG00015021448	-	100	92.344	ENSTNIG00000011300	si:dkey-16l2.16	100	92.344	Tetraodon_nigroviridis
ENSSFOG00015021448	-	100	86.124	ENSXMAG00000021767	si:dkey-16l2.16	100	86.124	Xiphophorus_maculatus