EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015021475 (Gene tree)
Gene ID: 108939193
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 4966 bases
Position: chrKV411187.1:6224104-6229069
Accession: 108939193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033652	Mago-bind	PF09282.10	2.5e-13	1	1
ENSSFOP00015033640	Mago-bind	PF09282.10	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015034018	-	3384	XM_018760345	ENSSFOP00015033640	229 (aa)	XP_018615861	A0A1W5ASP7
ENSSFOT00015034030	-	591	XM_018760346	ENSSFOP00015033652	196 (aa)	XP_018615862	-

Gene Model

Click here to download ENSSFOG00015021475's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03013	RNA transport	KEGG
sfm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021475	pym1	94	63.590	ENSG00000170473	PYM1	93	64.062	Homo_sapiens
ENSSFOG00015021475	pym1	100	65.066	ENSAPOG00000023045	pym1	93	63.366	Acanthochromis_polyacanthus
ENSSFOG00015021475	pym1	91	60.000	ENSAMEG00000003091	PYM1	91	60.000	Ailuropoda_melanoleuca
ENSSFOG00015021475	pym1	100	67.826	ENSACIG00000012769	pym1	100	66.516	Amphilophus_citrinellus
ENSSFOG00015021475	pym1	100	65.217	ENSAOCG00000021358	pym1	93	65.347	Amphiprion_ocellaris
ENSSFOG00015021475	pym1	100	65.217	ENSAPEG00000022679	pym1	93	65.347	Amphiprion_percula
ENSSFOG00015021475	pym1	100	65.421	ENSATEG00000024022	pym1	93	66.834	Anabas_testudineus
ENSSFOG00015021475	pym1	94	60.891	ENSACAG00000005714	PYM1	93	61.307	Anolis_carolinensis
ENSSFOG00015021475	pym1	94	63.590	ENSANAG00000036967	PYM1	93	64.062	Aotus_nancymaae
ENSSFOG00015021475	pym1	98	68.812	ENSAMXG00000007650	pym1	92	71.053	Astyanax_mexicanus
ENSSFOG00015021475	pym1	94	63.452	ENSBTAG00000031146	PYM1	93	63.918	Bos_taurus
ENSSFOG00015021475	pym1	94	63.590	ENSCJAG00000041077	PYM1	93	64.062	Callithrix_jacchus
ENSSFOG00015021475	pym1	94	64.103	ENSCAFG00000000076	PYM1	93	64.583	Canis_familiaris
ENSSFOG00015021475	pym1	94	64.103	ENSCAFG00020026099	PYM1	93	64.583	Canis_lupus_dingo
ENSSFOG00015021475	pym1	94	59.391	ENSCHIG00000026207	PYM1	93	64.433	Capra_hircus
ENSSFOG00015021475	pym1	94	63.452	ENSTSYG00000000787	PYM1	93	63.918	Carlito_syrichta
ENSSFOG00015021475	pym1	88	60.541	ENSCAPG00000010374	PYM1	92	60.989	Cavia_aperea
ENSSFOG00015021475	pym1	94	61.929	ENSCPOG00000031546	PYM1	93	62.371	Cavia_porcellus
ENSSFOG00015021475	pym1	94	63.590	ENSCCAG00000026187	PYM1	93	64.062	Cebus_capucinus
ENSSFOG00015021475	pym1	94	63.590	ENSCATG00000018801	PYM1	93	64.062	Cercocebus_atys
ENSSFOG00015021475	pym1	94	60.396	ENSCLAG00000007964	PYM1	93	63.402	Chinchilla_lanigera
ENSSFOG00015021475	pym1	89	62.500	ENSCSAG00000005291	PYM1	91	62.983	Chlorocebus_sabaeus
ENSSFOG00015021475	pym1	98	39.234	ENSCING00000006448	-	92	41.117	Ciona_intestinalis
ENSSFOG00015021475	pym1	98	37.826	ENSCSAVG00000009805	-	87	39.394	Ciona_savignyi
ENSSFOG00015021475	pym1	94	63.590	ENSCANG00000020338	-	93	64.062	Colobus_angolensis_palliatus
ENSSFOG00015021475	pym1	92	61.780	ENSCANG00000019757	-	85	61.780	Colobus_angolensis_palliatus
ENSSFOG00015021475	pym1	87	54.023	ENSCGRG00001004231	-	90	54.945	Cricetulus_griseus_chok1gshd
ENSSFOG00015021475	pym1	94	58.376	ENSCGRG00001018051	-	93	60.938	Cricetulus_griseus_chok1gshd
ENSSFOG00015021475	pym1	94	58.376	ENSCGRG00000012495	-	93	60.938	Cricetulus_griseus_crigri
ENSSFOG00015021475	pym1	87	54.023	ENSCGRG00000018933	-	90	54.945	Cricetulus_griseus_crigri
ENSSFOG00015021475	pym1	100	66.047	ENSCSEG00000021531	pym1	100	65.566	Cynoglossus_semilaevis
ENSSFOG00015021475	pym1	99	62.174	ENSCVAG00000017360	pym1	88	62.736	Cyprinodon_variegatus
ENSSFOG00015021475	pym1	100	57.143	ENSDARG00000046024	pym1	92	56.915	Danio_rerio
ENSSFOG00015021475	pym1	92	64.249	ENSDNOG00000048414	PYM1	85	64.249	Dasypus_novemcinctus
ENSSFOG00015021475	pym1	94	63.265	ENSDORG00000029448	Pym1	93	63.731	Dipodomys_ordii
ENSSFOG00015021475	pym1	98	31.878	FBgn0034918	Pym	91	33.495	Drosophila_melanogaster
ENSSFOG00015021475	pym1	89	59.563	ENSETEG00000004461	-	92	60.000	Echinops_telfairi
ENSSFOG00015021475	pym1	88	63.587	ENSEASG00005002271	PYM1	80	64.088	Equus_asinus_asinus
ENSSFOG00015021475	pym1	94	65.482	ENSECAG00000011870	PYM1	93	65.979	Equus_caballus
ENSSFOG00015021475	pym1	100	68.116	ENSELUG00000024250	pym1	93	68.750	Esox_lucius
ENSSFOG00015021475	pym1	94	63.636	ENSFCAG00000013967	PYM1	93	64.103	Felis_catus
ENSSFOG00015021475	pym1	94	64.000	ENSFDAG00000006314	PYM1	93	64.467	Fukomys_damarensis
ENSSFOG00015021475	pym1	100	65.665	ENSFHEG00000005884	pym1	93	64.390	Fundulus_heteroclitus
ENSSFOG00015021475	pym1	93	61.421	ENSGMOG00000007239	pym1	91	61.340	Gadus_morhua
ENSSFOG00015021475	pym1	94	63.402	ENSGALG00000046169	PYM1	93	63.874	Gallus_gallus
ENSSFOG00015021475	pym1	100	65.652	ENSGAFG00000003280	pym1	100	64.384	Gambusia_affinis
ENSSFOG00015021475	pym1	100	60.488	ENSGACG00000010703	pym1	92	61.053	Gasterosteus_aculeatus
ENSSFOG00015021475	pym1	91	59.701	ENSGAGG00000001973	PYM1	83	62.434	Gopherus_agassizii
ENSSFOG00015021475	pym1	94	63.590	ENSGGOG00000043246	PYM1	93	64.062	Gorilla_gorilla
ENSSFOG00015021475	pym1	100	67.150	ENSHBUG00000012719	pym1	92	68.254	Haplochromis_burtoni
ENSSFOG00015021475	pym1	92	63.918	ENSHGLG00000017155	PYM1	93	63.918	Heterocephalus_glaber_female
ENSSFOG00015021475	pym1	92	63.918	ENSHGLG00100015341	PYM1	93	63.918	Heterocephalus_glaber_male
ENSSFOG00015021475	pym1	100	60.435	ENSHCOG00000007987	pym1	80	60.930	Hippocampus_comes
ENSSFOG00015021475	pym1	99	65.714	ENSIPUG00000005975	wibga	93	66.837	Ictalurus_punctatus
ENSSFOG00015021475	pym1	94	62.944	ENSSTOG00000014206	PYM1	93	63.402	Ictidomys_tridecemlineatus
ENSSFOG00015021475	pym1	94	61.929	ENSJJAG00000013338	Pym1	93	62.371	Jaculus_jaculus
ENSSFOG00015021475	pym1	100	64.286	ENSKMAG00000006351	pym1	93	62.443	Kryptolebias_marmoratus
ENSSFOG00015021475	pym1	100	64.186	ENSLBEG00000015707	pym1	93	63.500	Labrus_bergylta
ENSSFOG00015021475	pym1	89	62.176	ENSLACG00000014398	PYM1	88	62.632	Latimeria_chalumnae
ENSSFOG00015021475	pym1	94	64.141	ENSLAFG00000002369	PYM1	93	64.615	Loxodonta_africana
ENSSFOG00015021475	pym1	94	63.590	ENSMFAG00000003048	PYM1	93	64.062	Macaca_fascicularis
ENSSFOG00015021475	pym1	94	63.590	ENSMMUG00000011002	PYM1	93	64.062	Macaca_mulatta
ENSSFOG00015021475	pym1	94	63.590	ENSMNEG00000034677	PYM1	93	64.062	Macaca_nemestrina
ENSSFOG00015021475	pym1	94	63.590	ENSMLEG00000007971	PYM1	93	64.062	Mandrillus_leucophaeus
ENSSFOG00015021475	pym1	100	65.217	ENSMAMG00000001588	pym1	93	66.047	Mastacembelus_armatus
ENSSFOG00015021475	pym1	100	66.667	ENSMZEG00005026458	pym1	92	67.725	Maylandia_zebra
ENSSFOG00015021475	pym1	94	58.854	ENSMAUG00000007318	Pym1	93	61.905	Mesocricetus_auratus
ENSSFOG00015021475	pym1	94	63.452	ENSMICG00000032962	PYM1	93	63.918	Microcebus_murinus
ENSSFOG00015021475	pym1	94	58.247	ENSMOCG00000010208	Pym1	93	61.257	Microtus_ochrogaster
ENSSFOG00015021475	pym1	100	64.216	ENSMMOG00000009301	pym1	92	64.550	Mola_mola
ENSSFOG00015021475	pym1	100	66.667	ENSMALG00000013496	pym1	93	67.172	Monopterus_albus
ENSSFOG00015021475	pym1	92	61.458	MGP_CAROLIEiJ_G0015953	Pym1	93	61.458	Mus_caroli
ENSSFOG00015021475	pym1	92	63.021	ENSMUSG00000064030	Pym1	93	63.021	Mus_musculus
ENSSFOG00015021475	pym1	92	62.304	MGP_PahariEiJ_G0031131	Pym1	92	61.290	Mus_pahari
ENSSFOG00015021475	pym1	92	63.021	MGP_SPRETEiJ_G0016778	Pym1	93	63.021	Mus_spretus
ENSSFOG00015021475	pym1	94	63.452	ENSMPUG00000000931	PYM1	93	63.918	Mustela_putorius_furo
ENSSFOG00015021475	pym1	92	60.733	ENSMLUG00000003586	PYM1	93	60.733	Myotis_lucifugus
ENSSFOG00015021475	pym1	89	60.963	ENSNGAG00000019207	Pym1	86	61.413	Nannospalax_galili
ENSSFOG00015021475	pym1	100	66.514	ENSNBRG00000006951	pym1	93	65.581	Neolamprologus_brichardi
ENSSFOG00015021475	pym1	94	63.590	ENSNLEG00000017588	PYM1	93	64.062	Nomascus_leucogenys
ENSSFOG00015021475	pym1	87	58.659	ENSMEUG00000001017	PYM1	92	60.335	Notamacropus_eugenii
ENSSFOG00015021475	pym1	92	61.458	ENSOPRG00000007797	PYM1	90	61.905	Ochotona_princeps
ENSSFOG00015021475	pym1	94	62.944	ENSODEG00000004289	PYM1	93	63.402	Octodon_degus
ENSSFOG00015021475	pym1	100	67.100	ENSONIG00000016740	pym1	93	66.667	Oreochromis_niloticus
ENSSFOG00015021475	pym1	89	62.500	ENSOCUG00000025969	PYM1	79	62.983	Oryctolagus_cuniculus
ENSSFOG00015021475	pym1	100	65.094	ENSORLG00000030592	pym1	93	64.467	Oryzias_latipes
ENSSFOG00015021475	pym1	100	65.116	ENSORLG00020011264	pym1	93	65.000	Oryzias_latipes_hni
ENSSFOG00015021475	pym1	100	65.581	ENSORLG00015005287	pym1	93	65.000	Oryzias_latipes_hsok
ENSSFOG00015021475	pym1	100	67.241	ENSOMEG00000022250	pym1	93	66.359	Oryzias_melastigma
ENSSFOG00015021475	pym1	89	62.500	ENSOGAG00000007038	PYM1	87	62.983	Otolemur_garnettii
ENSSFOG00015021475	pym1	94	59.391	ENSOARG00000010856	PYM1	93	64.433	Ovis_aries
ENSSFOG00015021475	pym1	94	63.590	ENSPPAG00000043630	PYM1	93	64.062	Pan_paniscus
ENSSFOG00015021475	pym1	94	62.944	ENSPPRG00000013243	PYM1	93	63.590	Panthera_pardus
ENSSFOG00015021475	pym1	94	62.437	ENSPTIG00000017380	PYM1	93	62.887	Panthera_tigris_altaica
ENSSFOG00015021475	pym1	94	63.590	ENSPTRG00000005067	PYM1	93	64.062	Pan_troglodytes
ENSSFOG00015021475	pym1	94	64.103	ENSPANG00000009562	PYM1	93	64.583	Papio_anubis
ENSSFOG00015021475	pym1	99	76.077	ENSPKIG00000006301	pym1	93	75.385	Paramormyrops_kingsleyae
ENSSFOG00015021475	pym1	94	57.789	ENSPSIG00000003043	PYM1	93	59.000	Pelodiscus_sinensis
ENSSFOG00015021475	pym1	99	67.005	ENSPMGG00000023161	pym1	92	66.120	Periophthalmus_magnuspinnatus
ENSSFOG00015021475	pym1	94	60.938	ENSPEMG00000009372	Pym1	93	63.492	Peromyscus_maniculatus_bairdii
ENSSFOG00015021475	pym1	87	59.218	ENSPCIG00000024658	PYM1	86	60.894	Phascolarctos_cinereus
ENSSFOG00015021475	pym1	100	65.939	ENSPFOG00000008193	pym1	93	64.677	Poecilia_formosa
ENSSFOG00015021475	pym1	100	65.939	ENSPLAG00000009228	pym1	93	64.677	Poecilia_latipinna
ENSSFOG00015021475	pym1	100	65.939	ENSPMEG00000001505	pym1	93	64.677	Poecilia_mexicana
ENSSFOG00015021475	pym1	90	61.828	ENSPPYG00000004635	PYM1	91	62.431	Pongo_abelii
ENSSFOG00015021475	pym1	94	63.452	ENSPCOG00000019706	PYM1	93	63.918	Propithecus_coquereli
ENSSFOG00015021475	pym1	90	62.766	ENSPVAG00000011437	PYM1	91	63.587	Pteropus_vampyrus
ENSSFOG00015021475	pym1	100	68.657	ENSPNYG00000012871	pym1	92	68.254	Pundamilia_nyererei
ENSSFOG00015021475	pym1	99	66.372	ENSPNAG00000018833	pym1	93	65.829	Pygocentrus_nattereri
ENSSFOG00015021475	pym1	92	56.684	ENSRNOG00000058130	Pym1	91	58.333	Rattus_norvegicus
ENSSFOG00015021475	pym1	78	51.553	ENSRNOG00000049415	AABR07055413.1	82	51.553	Rattus_norvegicus
ENSSFOG00015021475	pym1	94	59.487	ENSRBIG00000033362	PYM1	92	59.896	Rhinopithecus_bieti
ENSSFOG00015021475	pym1	94	63.590	ENSRROG00000043620	PYM1	93	64.062	Rhinopithecus_roxellana
ENSSFOG00015021475	pym1	94	63.590	ENSSBOG00000029393	PYM1	93	64.062	Saimiri_boliviensis_boliviensis
ENSSFOG00015021475	pym1	92	63.158	ENSSHAG00000008280	PYM1	93	63.158	Sarcophilus_harrisii
ENSSFOG00015021475	pym1	100	62.771	ENSSMAG00000020912	pym1	93	63.426	Scophthalmus_maximus
ENSSFOG00015021475	pym1	100	62.844	ENSSDUG00000001807	pym1	93	62.844	Seriola_dumerili
ENSSFOG00015021475	pym1	100	64.762	ENSSLDG00000013730	pym1	93	64.141	Seriola_lalandi_dorsalis
ENSSFOG00015021475	pym1	89	58.602	ENSSARG00000009569	PYM1	92	62.088	Sorex_araneus
ENSSFOG00015021475	pym1	89	60.963	ENSSPUG00000015059	PYM1	90	60.963	Sphenodon_punctatus
ENSSFOG00015021475	pym1	100	65.801	ENSSPAG00000020100	pym1	93	65.741	Stegastes_partitus
ENSSFOG00015021475	pym1	94	63.776	ENSSSCG00000040825	PYM1	93	64.249	Sus_scrofa
ENSSFOG00015021475	pym1	99	67.136	ENSTRUG00000021367	pym1	93	67.839	Takifugu_rubripes
ENSSFOG00015021475	pym1	100	61.650	ENSTNIG00000012534	pym1	92	66.492	Tetraodon_nigroviridis
ENSSFOG00015021475	pym1	87	59.777	ENSTBEG00000004208	PYM1	92	59.777	Tupaia_belangeri
ENSSFOG00015021475	pym1	89	62.567	ENSTTRG00000014971	PYM1	91	64.130	Tursiops_truncatus
ENSSFOG00015021475	pym1	94	61.929	ENSUAMG00000014521	PYM1	93	62.371	Ursus_americanus
ENSSFOG00015021475	pym1	91	58.947	ENSUMAG00000016241	PYM1	83	58.947	Ursus_maritimus
ENSSFOG00015021475	pym1	94	61.658	ENSVVUG00000022749	PYM1	93	62.105	Vulpes_vulpes
ENSSFOG00015021475	pym1	94	60.825	ENSXETG00000021850	pym1	93	62.766	Xenopus_tropicalis
ENSSFOG00015021475	pym1	100	65.217	ENSXMAG00000011649	pym1	100	63.426	Xiphophorus_maculatus