EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021588 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ataxin-2-like protein
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 13469 bases
Position: chrKV411012.1:202073-215541
Accession: 108933008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015033849	PAM2	PF07145.15	3.4e-05	1	1
ENSSFOP00015033849	LsmAD	PF06741.13	8.9e-18	1	1
ENSSFOP00015033849	SM-ATX	PF14438.6	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015034227	-	2697	XM_018749790	ENSSFOP00015033849	898 (aa)	XP_018605306	-

Gene Model

Click here to download ENSSFOG00015021588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021588	-	99	59.807	ENSSFOG00015001018	atxn2l	79	66.146
ENSSFOG00015021588	-	70	52.416	ENSSFOG00015017229	atxn2	60	52.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021588	-	97	59.389	ENSACIG00000014731	-	97	58.182	Amphilophus_citrinellus
ENSSFOG00015021588	-	99	49.789	ENSACIG00000024435	atxn2l	80	60.393	Amphilophus_citrinellus
ENSSFOG00015021588	-	52	60.366	ENSAPEG00000011038	-	84	66.307	Amphiprion_percula
ENSSFOG00015021588	-	84	52.632	ENSCCAG00000033928	ATXN2L	62	63.669	Cebus_capucinus
ENSSFOG00015021588	-	84	52.882	ENSCATG00000021354	ATXN2L	65	64.029	Cercocebus_atys
ENSSFOG00015021588	-	70	64.029	ENSCLAG00000016117	ATXN2L	60	64.029	Chinchilla_lanigera
ENSSFOG00015021588	-	68	58.824	ENSCPBG00000003859	ATXN2L	54	58.824	Chrysemys_picta_bellii
ENSSFOG00015021588	-	97	64.070	ENSCVAG00000015825	-	76	65.640	Cyprinodon_variegatus
ENSSFOG00015021588	-	97	44.252	ENSEASG00005014992	ATXN2L	66	63.669	Equus_asinus_asinus
ENSSFOG00015021588	-	72	61.246	ENSGAGG00000006078	ATXN2L	56	61.246	Gopherus_agassizii
ENSSFOG00015021588	-	62	59.259	ENSGGOG00000036669	-	61	59.259	Gorilla_gorilla
ENSSFOG00015021588	-	70	63.669	ENSHGLG00000010957	ATXN2L	54	63.669	Heterocephalus_glaber_female
ENSSFOG00015021588	-	70	63.669	ENSHGLG00100000705	ATXN2L	61	63.669	Heterocephalus_glaber_male
ENSSFOG00015021588	-	93	60.231	ENSHCOG00000017587	-	99	60.578	Hippocampus_comes
ENSSFOG00015021588	-	70	63.309	ENSLAFG00000018143	ATXN2L	66	63.309	Loxodonta_africana
ENSSFOG00015021588	-	85	64.720	ENSMAMG00000013005	-	74	70.270	Mastacembelus_armatus
ENSSFOG00015021588	-	99	58.883	ENSMALG00000008430	-	93	58.556	Monopterus_albus
ENSSFOG00015021588	-	97	44.610	MGP_CAROLIEiJ_G0030450	Atxn2l	71	72.152	Mus_caroli
ENSSFOG00015021588	-	97	44.444	ENSMUSG00000032637	Atxn2l	71	72.152	Mus_musculus
ENSSFOG00015021588	-	97	44.444	MGP_SPRETEiJ_G0031564	Atxn2l	71	72.152	Mus_spretus
ENSSFOG00015021588	-	80	59.934	ENSMEUG00000011098	ATXN2L	58	60.900	Notamacropus_eugenii
ENSSFOG00015021588	-	69	53.597	ENSOPRG00000002270	-	62	54.122	Ochotona_princeps
ENSSFOG00015021588	-	99	58.643	ENSONIG00000011478	-	95	59.891	Oreochromis_niloticus
ENSSFOG00015021588	-	84	52.381	ENSOCUG00000002677	ATXN2L	65	63.309	Oryctolagus_cuniculus
ENSSFOG00015021588	-	99	59.419	ENSOMEG00000021118	-	95	59.801	Oryzias_melastigma
ENSSFOG00015021588	-	99	74.050	ENSPKIG00000018462	-	94	73.398	Paramormyrops_kingsleyae
ENSSFOG00015021588	-	74	60.208	ENSPSIG00000004866	ATXN2L	65	60.208	Pelodiscus_sinensis
ENSSFOG00015021588	-	77	68.546	ENSPMGG00000014821	-	89	60.976	Periophthalmus_magnuspinnatus
ENSSFOG00015021588	-	82	62.530	ENSPFOG00000005935	-	92	54.908	Poecilia_formosa
ENSSFOG00015021588	-	85	61.800	ENSPLAG00000017094	-	78	64.234	Poecilia_latipinna
ENSSFOG00015021588	-	82	62.530	ENSPMEG00000017227	-	75	67.391	Poecilia_mexicana
ENSSFOG00015021588	-	82	63.659	ENSPREG00000023090	-	76	64.964	Poecilia_reticulata
ENSSFOG00015021588	-	70	53.237	ENSPVAG00000003958	ATXN2L	56	53.237	Pteropus_vampyrus
ENSSFOG00015021588	-	67	67.213	ENSRBIG00000036712	ATXN2L	61	67.213	Rhinopithecus_bieti
ENSSFOG00015021588	-	81	54.654	ENSSMAG00000016365	atxn2l	76	54.415	Scophthalmus_maximus
ENSSFOG00015021588	-	79	62.887	ENSSPUG00000016297	ATXN2L	56	62.887	Sphenodon_punctatus
ENSSFOG00015021588	-	82	66.047	ENSSPAG00000008174	-	82	65.358	Stegastes_partitus
ENSSFOG00015021588	-	54	56.445	ENSTRUG00000007132	-	82	63.441	Takifugu_rubripes
ENSSFOG00015021588	-	70	63.309	ENSTTRG00000005913	ATXN2L	56	63.309	Tursiops_truncatus
ENSSFOG00015021588	-	98	43.536	ENSUMAG00000009437	ATXN2L	74	63.669	Ursus_maritimus