EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021687 (Gene tree)
Gene ID: 108921740
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 2
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 111124 bases
Position: chrKV410807.1:7569294-7680417
Accession: 108921740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015034047	RRM_1	PF00076.22	1.2e-32	1	2
ENSSFOP00015034047	RRM_1	PF00076.22	1.2e-32	2	2
ENSSFOP00015034033	RRM_1	PF00076.22	1.3e-32	1	2
ENSSFOP00015034033	RRM_1	PF00076.22	1.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015034425	-	5915	XM_018731400	ENSSFOP00015034047	297 (aa)	XP_018586916	A0A1W4YF22
ENSSFOT00015034411	-	5975	XM_018731399	ENSSFOP00015034033	317 (aa)	XP_018586915	A0A1W4YEP5

Gene Model

Click here to download ENSSFOG00015021687's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021687	-	61	41.848	ENSSFOG00015001814	hnrnpa3	86	37.209
ENSSFOG00015021687	-	57	51.479	ENSSFOG00015022519	hnrnpabb	60	46.262
ENSSFOG00015021687	-	51	38.158	ENSSFOG00015005346	cirbpb	84	38.158
ENSSFOG00015021687	-	57	49.704	ENSSFOG00015005893	hnrnpdl	79	42.324
ENSSFOG00015021687	-	71	32.558	ENSSFOG00015004453	rbm38	50	32.558
ENSSFOG00015021687	-	97	72.542	ENSSFOG00015014964	-	95	72.340
ENSSFOG00015021687	-	51	37.748	ENSSFOG00015014029	tardbpl	57	37.662
ENSSFOG00015021687	-	97	84.834	ENSSFOG00015012168	msi2b	92	84.834
ENSSFOG00015021687	-	62	46.875	ENSSFOG00015005913	hnrnpd	61	46.875
ENSSFOG00015021687	-	57	50.888	ENSSFOG00015015634	hnrnpaba	65	48.677
ENSSFOG00015021687	-	61	42.623	ENSSFOG00015007588	-	54	42.623
ENSSFOG00015021687	-	97	76.375	ENSSFOG00015005350	MSI1	100	76.375
ENSSFOG00015021687	-	61	42.308	ENSSFOG00015016280	hnrnpa1	57	42.308
ENSSFOG00015021687	-	57	41.279	ENSSFOG00015002650	HNRNPA0	57	43.169
ENSSFOG00015021687	-	56	30.380	ENSSFOG00015018567	zgc:77262	86	30.380

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021687	-	97	87.948	ENSG00000153944	MSI2	94	91.549	Homo_sapiens
ENSSFOG00015021687	-	97	93.243	ENSAPOG00000001658	msi2a	97	87.459	Acanthochromis_polyacanthus
ENSSFOG00015021687	-	97	82.209	ENSAMEG00000002697	MSI2	100	84.663	Ailuropoda_melanoleuca
ENSSFOG00015021687	-	97	87.892	ENSACIG00000009475	msi2a	99	67.204	Amphilophus_citrinellus
ENSSFOG00015021687	-	59	78.400	ENSAOCG00000014822	msi2a	64	78.400	Amphiprion_ocellaris
ENSSFOG00015021687	-	97	87.129	ENSAPEG00000007706	msi2a	97	87.459	Amphiprion_percula
ENSSFOG00015021687	-	97	93.243	ENSATEG00000010498	msi2a	97	87.459	Anabas_testudineus
ENSSFOG00015021687	-	97	89.568	ENSATEG00000003301	-	100	89.928	Anabas_testudineus
ENSSFOG00015021687	-	97	90.625	ENSACAG00000005452	MSI2	71	88.679	Anolis_carolinensis
ENSSFOG00015021687	-	97	87.948	ENSANAG00000037827	MSI2	94	89.577	Aotus_nancymaae
ENSSFOG00015021687	-	97	92.793	ENSACLG00000007752	msi2a	97	86.799	Astatotilapia_calliptera
ENSSFOG00015021687	-	94	94.144	ENSAMXG00000010474	msi2b	95	91.234	Astyanax_mexicanus
ENSSFOG00015021687	-	97	94.595	ENSAMXG00000032796	msi2a	94	90.584	Astyanax_mexicanus
ENSSFOG00015021687	-	97	87.662	ENSBTAG00000004406	MSI2	97	89.286	Bos_taurus
ENSSFOG00015021687	-	77	61.066	WBGene00003423	msi-1	74	61.066	Caenorhabditis_elegans
ENSSFOG00015021687	-	97	87.948	ENSCJAG00000013998	MSI2	94	89.577	Callithrix_jacchus
ENSSFOG00015021687	-	97	81.553	ENSCAFG00020025620	MSI2	81	83.072	Canis_lupus_dingo
ENSSFOG00015021687	-	97	87.622	ENSCHIG00000016580	MSI2	94	89.251	Capra_hircus
ENSSFOG00015021687	-	97	84.397	ENSCPOG00000034042	MSI2	99	86.170	Cavia_porcellus
ENSSFOG00015021687	-	97	87.948	ENSCCAG00000033927	MSI2	94	89.577	Cebus_capucinus
ENSSFOG00015021687	-	97	87.948	ENSCATG00000040879	MSI2	94	89.577	Cercocebus_atys
ENSSFOG00015021687	-	97	82.154	ENSCLAG00000014325	MSI2	94	84.615	Chinchilla_lanigera
ENSSFOG00015021687	-	97	87.948	ENSCSAG00000005633	MSI2	94	89.577	Chlorocebus_sabaeus
ENSSFOG00015021687	-	93	62.366	ENSCHOG00000008660	MSI2	99	62.366	Choloepus_hoffmanni
ENSSFOG00015021687	-	97	93.956	ENSCPBG00000009942	MSI2	95	85.714	Chrysemys_picta_bellii
ENSSFOG00015021687	-	72	69.291	ENSCING00000018579	-	97	51.598	Ciona_intestinalis
ENSSFOG00015021687	-	90	56.040	ENSCSAVG00000010397	-	94	56.376	Ciona_savignyi
ENSSFOG00015021687	-	97	87.111	ENSCANG00000036414	MSI2	100	84.568	Colobus_angolensis_palliatus
ENSSFOG00015021687	-	97	87.662	ENSCGRG00001013330	Msi2	94	89.286	Cricetulus_griseus_chok1gshd
ENSSFOG00015021687	-	97	81.957	ENSCGRG00000003141	Msi2	100	84.404	Cricetulus_griseus_crigri
ENSSFOG00015021687	-	60	72.222	ENSCSEG00000013549	msi2a	88	72.222	Cynoglossus_semilaevis
ENSSFOG00015021687	-	97	79.125	ENSCSEG00000003266	-	92	79.125	Cynoglossus_semilaevis
ENSSFOG00015021687	-	81	72.539	ENSCSEG00000013557	msi2a	83	72.539	Cynoglossus_semilaevis
ENSSFOG00015021687	-	97	93.243	ENSCVAG00000017075	msi2a	93	89.860	Cyprinodon_variegatus
ENSSFOG00015021687	-	97	91.441	ENSDARG00000033901	msi2a	95	71.662	Danio_rerio
ENSSFOG00015021687	-	97	94.595	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSSFOG00015021687	-	97	88.194	ENSDNOG00000014501	MSI2	100	89.931	Dasypus_novemcinctus
ENSSFOG00015021687	-	60	92.035	ENSDORG00000028440	-	100	92.035	Dipodomys_ordii
ENSSFOG00015021687	-	78	76.020	ENSDORG00000005394	Msi2	84	78.173	Dipodomys_ordii
ENSSFOG00015021687	-	97	56.657	FBgn0260943	Rbp6	90	68.456	Drosophila_melanogaster
ENSSFOG00015021687	-	75	73.026	ENSETEG00000012450	-	64	73.026	Echinops_telfairi
ENSSFOG00015021687	-	91	61.613	ENSEBUG00000006732	msi2a	87	61.613	Eptatretus_burgeri
ENSSFOG00015021687	-	97	84.385	ENSEASG00005002965	MSI2	97	78.348	Equus_asinus_asinus
ENSSFOG00015021687	-	97	86.087	ENSECAG00000011435	MSI2	94	82.282	Equus_caballus
ENSSFOG00015021687	-	84	73.913	ENSEEUG00000007810	MSI2	100	75.889	Erinaceus_europaeus
ENSSFOG00015021687	-	95	95.067	ENSELUG00000011747	msi2a	94	91.468	Esox_lucius
ENSSFOG00015021687	-	97	93.694	ENSELUG00000001361	msi2b	94	84.395	Esox_lucius
ENSSFOG00015021687	-	57	77.165	ENSFCAG00000033787	-	70	77.165	Felis_catus
ENSSFOG00015021687	-	97	87.948	ENSFCAG00000041686	MSI2	94	89.577	Felis_catus
ENSSFOG00015021687	-	97	82.154	ENSFDAG00000016118	MSI2	100	84.615	Fukomys_damarensis
ENSSFOG00015021687	-	97	93.243	ENSFHEG00000000084	msi2a	97	86.799	Fundulus_heteroclitus
ENSSFOG00015021687	-	54	91.566	ENSGMOG00000007596	-	80	91.566	Gadus_morhua
ENSSFOG00015021687	-	97	81.846	ENSGALG00000005567	MSI2	94	84.308	Gallus_gallus
ENSSFOG00015021687	-	93	77.891	ENSGAFG00000006974	msi2a	95	78.231	Gambusia_affinis
ENSSFOG00015021687	-	97	93.596	ENSGAGG00000016542	MSI2	100	82.566	Gopherus_agassizii
ENSSFOG00015021687	-	97	87.111	ENSGGOG00000013182	MSI2	100	84.568	Gorilla_gorilla
ENSSFOG00015021687	-	97	92.793	ENSHBUG00000020800	msi2a	97	86.799	Haplochromis_burtoni
ENSSFOG00015021687	-	96	72.615	ENSHGLG00000012444	MSI2	93	75.077	Heterocephalus_glaber_female
ENSSFOG00015021687	-	75	76.329	ENSHGLG00100003744	MSI2	100	80.193	Heterocephalus_glaber_male
ENSSFOG00015021687	-	60	92.105	ENSHGLG00100004028	-	87	92.105	Heterocephalus_glaber_male
ENSSFOG00015021687	-	97	92.793	ENSHCOG00000000266	msi2a	91	82.019	Hippocampus_comes
ENSSFOG00015021687	-	78	86.522	ENSHCOG00000017241	-	57	86.522	Hippocampus_comes
ENSSFOG00015021687	-	97	94.144	ENSIPUG00000003732	msi2b	93	86.689	Ictalurus_punctatus
ENSSFOG00015021687	-	97	94.595	ENSIPUG00000021097	msi2a	94	90.411	Ictalurus_punctatus
ENSSFOG00015021687	-	97	84.397	ENSSTOG00000007884	MSI2	99	86.170	Ictidomys_tridecemlineatus
ENSSFOG00015021687	-	60	92.035	ENSJJAG00000009467	-	100	92.035	Jaculus_jaculus
ENSSFOG00015021687	-	75	77.387	ENSJJAG00000006292	-	100	77.387	Jaculus_jaculus
ENSSFOG00015021687	-	97	93.243	ENSKMAG00000009494	msi2a	89	88.737	Kryptolebias_marmoratus
ENSSFOG00015021687	-	97	86.010	ENSLBEG00000026223	-	100	86.010	Labrus_bergylta
ENSSFOG00015021687	-	97	93.243	ENSLBEG00000007061	msi2a	97	87.459	Labrus_bergylta
ENSSFOG00015021687	-	57	90.588	ENSLACG00000016798	MSI2	89	90.588	Latimeria_chalumnae
ENSSFOG00015021687	-	97	76.503	ENSLOCG00000004675	msi2b	95	76.230	Lepisosteus_oculatus
ENSSFOG00015021687	-	97	87.111	ENSMFAG00000003775	MSI2	100	84.568	Macaca_fascicularis
ENSSFOG00015021687	-	97	87.111	ENSMMUG00000002069	MSI2	100	84.568	Macaca_mulatta
ENSSFOG00015021687	-	97	87.948	ENSMNEG00000045275	MSI2	94	89.577	Macaca_nemestrina
ENSSFOG00015021687	-	97	87.111	ENSMLEG00000033888	MSI2	100	84.568	Mandrillus_leucophaeus
ENSSFOG00015021687	-	97	92.793	ENSMAMG00000002488	-	85	92.308	Mastacembelus_armatus
ENSSFOG00015021687	-	97	93.243	ENSMAMG00000010503	msi2a	98	86.084	Mastacembelus_armatus
ENSSFOG00015021687	-	97	92.793	ENSMZEG00005007676	msi2a	97	86.799	Maylandia_zebra
ENSSFOG00015021687	-	97	81.902	ENSMAUG00000003862	Msi2	94	84.356	Mesocricetus_auratus
ENSSFOG00015021687	-	97	87.948	ENSMICG00000013598	-	94	89.577	Microcebus_murinus
ENSSFOG00015021687	-	97	70.833	ENSMICG00000032913	-	93	72.436	Microcebus_murinus
ENSSFOG00015021687	-	97	82.154	ENSMOCG00000005820	Msi2	94	84.615	Microtus_ochrogaster
ENSSFOG00015021687	-	93	88.341	ENSMMOG00000008348	msi2a	94	88.341	Mola_mola
ENSSFOG00015021687	-	75	75.845	ENSMODG00000014790	MSI2	100	79.710	Monodelphis_domestica
ENSSFOG00015021687	-	97	93.243	ENSMALG00000000071	msi2a	95	93.243	Monopterus_albus
ENSSFOG00015021687	-	97	87.948	MGP_CAROLIEiJ_G0016948	Msi2	100	92.035	Mus_caroli
ENSSFOG00015021687	-	97	87.948	ENSMUSG00000069769	Msi2	100	92.035	Mus_musculus
ENSSFOG00015021687	-	97	87.948	MGP_PahariEiJ_G0018079	Msi2	100	92.035	Mus_pahari
ENSSFOG00015021687	-	97	87.948	MGP_SPRETEiJ_G0017795	Msi2	100	92.035	Mus_spretus
ENSSFOG00015021687	-	97	87.987	ENSMPUG00000015377	MSI2	97	89.610	Mustela_putorius_furo
ENSSFOG00015021687	-	97	87.662	ENSMLUG00000007865	MSI2	97	89.286	Myotis_lucifugus
ENSSFOG00015021687	-	97	82.154	ENSNGAG00000017807	Msi2	94	84.615	Nannospalax_galili
ENSSFOG00015021687	-	97	92.793	ENSNBRG00000014596	msi2a	97	86.799	Neolamprologus_brichardi
ENSSFOG00015021687	-	97	87.111	ENSNLEG00000008059	MSI2	95	90.865	Nomascus_leucogenys
ENSSFOG00015021687	-	75	83.007	ENSOPRG00000000872	-	64	83.007	Ochotona_princeps
ENSSFOG00015021687	-	97	82.154	ENSODEG00000011974	MSI2	94	84.615	Octodon_degus
ENSSFOG00015021687	-	61	93.077	ENSONIG00000001972	msi2a	72	93.077	Oreochromis_niloticus
ENSSFOG00015021687	-	97	92.825	ENSOANG00000005667	MSI2	75	90.688	Ornithorhynchus_anatinus
ENSSFOG00015021687	-	97	87.987	ENSOCUG00000010440	MSI2	97	89.610	Oryctolagus_cuniculus
ENSSFOG00015021687	-	97	93.243	ENSORLG00000009671	msi2a	94	89.384	Oryzias_latipes
ENSSFOG00015021687	-	97	93.274	ENSORLG00020021556	msi2a	94	89.384	Oryzias_latipes_hni
ENSSFOG00015021687	-	97	93.243	ENSORLG00015004592	msi2a	94	89.384	Oryzias_latipes_hsok
ENSSFOG00015021687	-	97	93.243	ENSOMEG00000000146	msi2a	98	87.708	Oryzias_melastigma
ENSSFOG00015021687	-	97	84.091	ENSOGAG00000005621	MSI2	100	85.714	Otolemur_garnettii
ENSSFOG00015021687	-	97	82.099	ENSPPAG00000037697	MSI2	100	84.568	Pan_paniscus
ENSSFOG00015021687	-	97	87.948	ENSPPRG00000001848	MSI2	94	89.577	Panthera_pardus
ENSSFOG00015021687	-	77	75.000	ENSPTIG00000021873	-	85	75.000	Panthera_tigris_altaica
ENSSFOG00015021687	-	97	81.613	ENSPTIG00000021678	MSI2	96	84.194	Panthera_tigris_altaica
ENSSFOG00015021687	-	97	87.111	ENSPTRG00000009437	MSI2	100	84.568	Pan_troglodytes
ENSSFOG00015021687	-	97	87.948	ENSPANG00000022319	MSI2	94	89.577	Papio_anubis
ENSSFOG00015021687	-	93	94.139	ENSPKIG00000007038	-	90	90.260	Paramormyrops_kingsleyae
ENSSFOG00015021687	-	97	92.793	ENSPSIG00000008618	MSI2	84	85.556	Pelodiscus_sinensis
ENSSFOG00015021687	-	97	86.469	ENSPMGG00000005888	msi2a	97	86.799	Periophthalmus_magnuspinnatus
ENSSFOG00015021687	-	60	92.035	ENSPEMG00000021793	-	100	92.035	Peromyscus_maniculatus_bairdii
ENSSFOG00015021687	-	97	81.210	ENSPCIG00000006063	MSI2	94	82.282	Phascolarctos_cinereus
ENSSFOG00015021687	-	56	89.286	ENSPFOG00000019337	MSI2	74	89.286	Poecilia_formosa
ENSSFOG00015021687	-	60	88.525	ENSPLAG00000000436	msi2a	64	89.256	Poecilia_latipinna
ENSSFOG00015021687	-	59	82.203	ENSPMEG00000013247	msi2a	73	82.203	Poecilia_mexicana
ENSSFOG00015021687	-	97	93.243	ENSPREG00000000881	msi2a	96	84.818	Poecilia_reticulata
ENSSFOG00015021687	-	97	84.454	ENSPPYG00000008244	-	100	86.555	Pongo_abelii
ENSSFOG00015021687	-	74	61.765	ENSPCAG00000010552	MSI2	100	62.605	Procavia_capensis
ENSSFOG00015021687	-	61	93.130	ENSPCOG00000019195	-	93	93.130	Propithecus_coquereli
ENSSFOG00015021687	-	97	79.795	ENSPVAG00000017053	MSI2	99	81.507	Pteropus_vampyrus
ENSSFOG00015021687	-	97	92.793	ENSPNYG00000018393	msi2a	97	86.799	Pundamilia_nyererei
ENSSFOG00015021687	-	97	90.476	ENSPNAG00000000844	msi2b	94	90.816	Pygocentrus_nattereri
ENSSFOG00015021687	-	97	94.144	ENSPNAG00000014957	msi2a	94	90.584	Pygocentrus_nattereri
ENSSFOG00015021687	-	97	88.489	ENSRNOG00000025338	Msi2	100	90.288	Rattus_norvegicus
ENSSFOG00015021687	-	60	92.174	ENSRROG00000034421	-	92	92.174	Rhinopithecus_roxellana
ENSSFOG00015021687	-	96	87.500	ENSSBOG00000026425	MSI2	100	84.568	Saimiri_boliviensis_boliviensis
ENSSFOG00015021687	-	97	82.099	ENSSHAG00000008672	MSI2	100	84.568	Sarcophilus_harrisii
ENSSFOG00015021687	-	97	93.243	ENSSMAG00000018484	msi2a	97	87.129	Scophthalmus_maximus
ENSSFOG00015021687	-	97	93.243	ENSSDUG00000014507	msi2a	97	87.459	Seriola_dumerili
ENSSFOG00015021687	-	97	83.333	ENSSDUG00000021968	-	86	91.538	Seriola_dumerili
ENSSFOG00015021687	-	97	93.243	ENSSLDG00000017172	msi2a	97	87.459	Seriola_lalandi_dorsalis
ENSSFOG00015021687	-	61	88.028	ENSSPUG00000000913	-	84	88.028	Sphenodon_punctatus
ENSSFOG00015021687	-	97	93.243	ENSSPAG00000017793	msi2a	89	90.074	Stegastes_partitus
ENSSFOG00015021687	-	97	87.948	ENSSSCG00000038505	MSI2	94	89.577	Sus_scrofa
ENSSFOG00015021687	-	75	76.329	ENSTGUG00000008452	MSI2	100	80.193	Taeniopygia_guttata
ENSSFOG00015021687	-	93	92.793	ENSTRUG00000021248	msi2a	88	88.435	Takifugu_rubripes
ENSSFOG00015021687	-	76	75.221	ENSTBEG00000001241	MSI2	69	75.221	Tupaia_belangeri
ENSSFOG00015021687	-	97	82.773	ENSTTRG00000002189	MSI2	100	82.773	Tursiops_truncatus
ENSSFOG00015021687	-	97	90.244	ENSUAMG00000000700	MSI2	97	89.610	Ursus_americanus
ENSSFOG00015021687	-	93	90.574	ENSUMAG00000000505	MSI2	95	90.574	Ursus_maritimus
ENSSFOG00015021687	-	67	77.901	ENSVPAG00000006837	-	62	77.901	Vicugna_pacos
ENSSFOG00015021687	-	97	90.000	ENSVVUG00000011783	MSI2	94	84.615	Vulpes_vulpes
ENSSFOG00015021687	-	97	91.403	ENSXCOG00000006113	msi2a	95	72.603	Xiphophorus_couchianus
ENSSFOG00015021687	-	97	93.243	ENSXMAG00000000608	msi2a	93	89.510	Xiphophorus_maculatus