EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015021743 (Gene tree)
Gene ID: 108936227
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 33746 bases
Position: chrKV410795.1:8560752-8594497
Accession: 108936227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015034093	AF-4	PF05110.13	4.6e-301	1	2
ENSSFOP00015034093	AF-4	PF05110.13	4.6e-301	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015034471	-	6221	XM_018755478	ENSSFOP00015034093	1133 (aa)	XP_018610994	A0A1W5A559

Gene Model

Click here to download ENSSFOG00015021743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021743	-	58	52.941	ENSG00000144218	AFF3	97	47.716	Homo_sapiens
ENSSFOG00015021743	-	99	37.948	ENSATEG00000015552	-	78	38.509	Anabas_testudineus
ENSSFOG00015021743	-	99	34.140	ENSAPLG00000011166	AFF4	81	34.378	Anas_platyrhynchos
ENSSFOG00015021743	-	52	51.020	ENSAMXG00000000387	aff2	66	51.429	Astyanax_mexicanus
ENSSFOG00015021743	-	79	35.372	ENSCJAG00000006047	AFF1	77	36.505	Callithrix_jacchus
ENSSFOG00015021743	-	52	53.165	ENSCPOG00000006346	AFF3	76	55.128	Cavia_porcellus
ENSSFOG00015021743	-	71	36.232	ENSCLAG00000017100	AFF3	76	53.846	Chinchilla_lanigera
ENSSFOG00015021743	-	72	32.412	ENSDNOG00000048783	-	52	38.217	Dasypus_novemcinctus
ENSSFOG00015021743	-	75	53.425	ENSELUG00000023871	aff4	90	54.430	Esox_lucius
ENSSFOG00015021743	-	76	71.111	ENSELUG00000019953	-	95	71.111	Esox_lucius
ENSSFOG00015021743	-	61	33.891	ENSFALG00000005554	AFF1	77	36.326	Ficedula_albicollis
ENSSFOG00015021743	-	99	36.326	ENSGACG00000016333	-	99	39.669	Gasterosteus_aculeatus
ENSSFOG00015021743	-	71	35.153	ENSHCOG00000016280	aff4	51	48.171	Hippocampus_comes
ENSSFOG00015021743	-	52	40.196	ENSIPUG00000015259	-	96	40.336	Ictalurus_punctatus
ENSSFOG00015021743	-	53	46.429	ENSLBEG00000017778	aff4	81	33.733	Labrus_bergylta
ENSSFOG00015021743	-	80	39.425	ENSLBEG00000016928	-	79	39.611	Labrus_bergylta
ENSSFOG00015021743	-	93	62.500	ENSLACG00000007303	AFF1	91	62.500	Latimeria_chalumnae
ENSSFOG00015021743	-	95	47.112	ENSLOCG00000004025	AFF1	99	46.619	Lepisosteus_oculatus
ENSSFOG00015021743	-	58	53.488	ENSLAFG00000012884	AFF3	54	53.086	Loxodonta_africana
ENSSFOG00015021743	-	78	34.764	ENSLAFG00000010555	AFF4	81	35.408	Loxodonta_africana
ENSSFOG00015021743	-	51	45.736	ENSLAFG00000018691	AFF2	87	36.054	Loxodonta_africana
ENSSFOG00015021743	-	99	37.449	ENSMAMG00000016189	-	98	36.785	Mastacembelus_armatus
ENSSFOG00015021743	-	80	42.308	ENSMAUG00000013669	Aff4	97	42.308	Mesocricetus_auratus
ENSSFOG00015021743	-	81	35.248	ENSMODG00000013842	AFF4	81	35.312	Monodelphis_domestica
ENSSFOG00015021743	-	99	38.006	ENSMALG00000002436	-	99	36.894	Monopterus_albus
ENSSFOG00015021743	-	78	33.577	MGP_CAROLIEiJ_G0016331	Aff4	66	51.250	Mus_caroli
ENSSFOG00015021743	-	58	50.633	ENSMUSG00000037138	Aff3	65	52.564	Mus_musculus
ENSSFOG00015021743	-	58	50.633	MGP_PahariEiJ_G0027310	Aff3	65	50.633	Mus_pahari
ENSSFOG00015021743	-	58	51.765	MGP_SPRETEiJ_G0014867	Aff3	65	50.633	Mus_spretus
ENSSFOG00015021743	-	60	34.511	ENSMLUG00000000293	AFF1	58	34.595	Myotis_lucifugus
ENSSFOG00015021743	-	66	51.899	ENSNGAG00000002408	Aff3	65	53.846	Nannospalax_galili
ENSSFOG00015021743	-	71	58.108	ENSOPRG00000014519	AFF4	69	58.108	Ochotona_princeps
ENSSFOG00015021743	-	52	34.540	ENSOANG00000007428	AFF4	50	35.303	Ornithorhynchus_anatinus
ENSSFOG00015021743	-	66	77.273	ENSPTIG00000011838	AFF1	70	77.273	Panthera_tigris_altaica
ENSSFOG00015021743	-	83	71.605	ENSPKIG00000007777	-	87	71.605	Paramormyrops_kingsleyae
ENSSFOG00015021743	-	67	50.000	ENSPKIG00000024325	AFF4	92	50.000	Paramormyrops_kingsleyae
ENSSFOG00015021743	-	57	50.633	ENSPEMG00000014802	Aff3	76	52.564	Peromyscus_maniculatus_bairdii
ENSSFOG00015021743	-	81	35.116	ENSPCIG00000000197	AFF4	81	35.347	Phascolarctos_cinereus
ENSSFOG00015021743	-	60	47.619	ENSPLAG00000005101	aff2	50	50.538	Poecilia_latipinna
ENSSFOG00015021743	-	68	51.250	ENSPCAG00000003995	AFF4	80	51.250	Procavia_capensis
ENSSFOG00015021743	-	64	73.913	ENSPCAG00000005658	AFF1	63	73.913	Procavia_capensis
ENSSFOG00015021743	-	58	50.633	ENSRNOG00000018830	Aff3	66	48.235	Rattus_norvegicus
ENSSFOG00015021743	-	81	34.171	ENSRNOG00000006965	Aff4	81	35.097	Rattus_norvegicus
ENSSFOG00015021743	-	66	70.238	ENSSHAG00000004203	AFF1	64	78.873	Sarcophilus_harrisii
ENSSFOG00015021743	-	81	36.004	ENSSHAG00000013198	AFF4	81	35.360	Sarcophilus_harrisii
ENSSFOG00015021743	-	99	38.300	ENSSMAG00000007062	-	98	38.629	Scophthalmus_maximus
ENSSFOG00015021743	-	58	38.075	ENSSDUG00000023775	-	94	37.675	Seriola_dumerili
ENSSFOG00015021743	-	99	38.957	ENSSLDG00000006836	-	99	38.993	Seriola_lalandi_dorsalis
ENSSFOG00015021743	-	56	52.899	ENSSARG00000011190	AFF4	57	52.899	Sorex_araneus
ENSSFOG00015021743	-	81	34.444	ENSSPUG00000012215	AFF4	99	33.222	Sphenodon_punctatus
ENSSFOG00015021743	-	97	38.940	ENSSPAG00000003972	-	97	38.396	Stegastes_partitus
ENSSFOG00015021743	-	78	31.908	ENSSSCG00000023593	AFF1	63	76.056	Sus_scrofa
ENSSFOG00015021743	-	62	34.337	ENSTGUG00000002726	AFF1	77	35.729	Taeniopygia_guttata
ENSSFOG00015021743	-	99	36.356	ENSTRUG00000014005	-	78	37.796	Takifugu_rubripes
ENSSFOG00015021743	-	99	35.122	ENSTNIG00000007537	-	79	34.592	Tetraodon_nigroviridis
ENSSFOG00015021743	-	66	51.899	ENSVVUG00000028696	AFF3	55	52.273	Vulpes_vulpes