EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021754 (Gene tree)
Gene ID: 108923850
Gene Symbol: rab13
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 5239 bases
Position: chrKV410779.1:843075-848313
Accession: 108923850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015034120	MMR_HSR1	PF01926.23	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015034498	-	1587	XM_018734874	ENSSFOP00015034120	199 (aa)	XP_018590390	A0A1W4YPM7

Gene Model

Click here to download ENSSFOG00015021754's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021754	rab13	89	37.363	ENSSFOG00015023903	KRAS	98	34.375
ENSSFOG00015021754	rab13	85	39.655	ENSSFOG00015005076	zgc:100918	85	39.655
ENSSFOG00015021754	rab13	79	38.608	ENSSFOG00015012604	rab23	74	38.562
ENSSFOG00015021754	rab13	78	31.056	ENSSFOG00015017512	dnajc27	59	31.056
ENSSFOG00015021754	rab13	85	39.181	ENSSFOG00015009244	rab39bb	76	39.181
ENSSFOG00015021754	rab13	86	44.186	ENSSFOG00015008657	rab25a	82	44.186
ENSSFOG00015021754	rab13	82	32.353	ENSSFOG00015008777	rasd3	78	32.353
ENSSFOG00015021754	rab13	79	45.570	ENSSFOG00015019202	RAB6B	76	45.570
ENSSFOG00015021754	rab13	82	40.936	ENSSFOG00015016156	rab36	67	40.936
ENSSFOG00015021754	rab13	85	39.080	ENSSFOG00015021180	RAB7A	84	39.080
ENSSFOG00015021754	rab13	87	47.977	ENSSFOG00015009042	rab11bb	79	47.977
ENSSFOG00015021754	rab13	86	48.256	ENSSFOG00015015336	rab4a	81	48.256
ENSSFOG00015021754	rab13	87	34.659	ENSSFOG00015023790	rheb	93	34.659
ENSSFOG00015021754	rab13	87	49.153	ENSSFOG00015018421	rab39b	83	49.153
ENSSFOG00015021754	rab13	93	40.957	ENSSFOG00015014517	rab5a	87	40.957
ENSSFOG00015021754	rab13	86	32.370	ENSSFOG00015014992	rhebl1	91	32.370
ENSSFOG00015021754	rab13	86	35.838	ENSSFOG00015011157	-	90	35.838
ENSSFOG00015021754	rab13	90	39.560	ENSSFOG00015016000	-	84	39.560
ENSSFOG00015021754	rab13	83	45.455	ENSSFOG00015011318	-	77	45.455
ENSSFOG00015021754	rab13	85	39.080	ENSSFOG00015020012	rab7a	84	39.080
ENSSFOG00015021754	rab13	97	45.411	ENSSFOG00015008618	rab11al	96	45.411
ENSSFOG00015021754	rab13	82	31.928	ENSSFOG00015004613	rasd4	79	31.928
ENSSFOG00015021754	rab13	88	38.547	ENSSFOG00015011771	-	87	38.547
ENSSFOG00015021754	rab13	79	41.875	ENSSFOG00015004325	rab34a	62	41.875
ENSSFOG00015021754	rab13	79	46.203	ENSSFOG00015011268	RAB41	75	46.203
ENSSFOG00015021754	rab13	87	44.505	ENSSFOG00015020112	rab33b	83	44.505
ENSSFOG00015021754	rab13	82	39.766	ENSSFOG00015010492	rab9b	83	39.766
ENSSFOG00015021754	rab13	90	55.866	ENSSFOG00015020836	rab1ba	87	55.866
ENSSFOG00015021754	rab13	82	41.667	ENSSFOG00015012085	rab22a	84	41.667
ENSSFOG00015021754	rab13	96	38.462	ENSSFOG00015012088	rab42	93	38.462
ENSSFOG00015021754	rab13	82	37.500	ENSSFOG00015003259	rab9a	78	37.500
ENSSFOG00015021754	rab13	85	57.396	ENSSFOG00015005464	zgc:171927	79	57.396
ENSSFOG00015021754	rab13	82	38.824	ENSSFOG00015000053	rab9a	77	38.824
ENSSFOG00015021754	rab13	89	45.304	ENSSFOG00015003628	-	85	45.304
ENSSFOG00015021754	rab13	78	32.298	ENSSFOG00015020074	DNAJC27	59	32.298
ENSSFOG00015021754	rab13	86	36.628	ENSSFOG00015003051	hrasb	90	36.416
ENSSFOG00015021754	rab13	79	40.625	ENSSFOG00015005188	rab34	60	43.846
ENSSFOG00015021754	rab13	94	37.949	ENSSFOG00015009988	-	88	37.949
ENSSFOG00015021754	rab13	76	34.211	ENSSFOG00015014423	rras2	85	34.211
ENSSFOG00015021754	rab13	79	47.468	ENSSFOG00015002077	rab6a	76	46.835
ENSSFOG00015021754	rab13	98	51.000	ENSSFOG00015017296	rab15	94	51.000
ENSSFOG00015021754	rab13	84	48.214	ENSSFOG00015015034	rab2a	79	48.214
ENSSFOG00015021754	rab13	85	42.690	ENSSFOG00015020732	rab42a	80	42.690
ENSSFOG00015021754	rab13	77	33.987	ENSSFOG00015020738	rabl2	67	33.987
ENSSFOG00015021754	rab13	88	51.136	ENSSFOG00015006414	-	83	51.136
ENSSFOG00015021754	rab13	83	45.455	ENSSFOG00015012785	rab14	77	45.455
ENSSFOG00015021754	rab13	84	47.619	ENSSFOG00015000865	-	83	48.408
ENSSFOG00015021754	rab13	88	48.295	ENSSFOG00015021448	-	83	48.295
ENSSFOG00015021754	rab13	81	38.037	ENSSFOG00015020319	mras	84	38.037
ENSSFOG00015021754	rab13	91	47.253	ENSSFOG00015024042	rab11a	85	47.253
ENSSFOG00015021754	rab13	79	46.203	ENSSFOG00015004941	rab41	73	46.203
ENSSFOG00015021754	rab13	93	40.957	ENSSFOG00015021115	-	87	40.957
ENSSFOG00015021754	rab13	91	34.946	ENSSFOG00015009566	si:dkey-13a21.4	91	34.946
ENSSFOG00015021754	rab13	96	39.594	ENSSFOG00015024034	rab33ba	96	39.594
ENSSFOG00015021754	rab13	81	37.037	ENSSFOG00015006846	-	98	34.375
ENSSFOG00015021754	rab13	80	34.302	ENSSFOG00015019261	rasl11a	67	34.302
ENSSFOG00015021754	rab13	98	48.515	ENSSFOG00015006076	rab35	99	48.515
ENSSFOG00015021754	rab13	80	41.463	ENSSFOG00015006175	zgc:101559	70	41.463
ENSSFOG00015021754	rab13	97	52.284	ENSSFOG00015011140	-	96	52.284
ENSSFOG00015021754	rab13	97	52.284	ENSSFOG00015001293	rab1ab	98	52.284
ENSSFOG00015021754	rab13	87	36.667	ENSSFOG00015006245	-	78	36.667
ENSSFOG00015021754	rab13	80	43.902	ENSSFOG00015004253	rab33a	73	43.902
ENSSFOG00015021754	rab13	81	46.626	ENSSFOG00015017444	rab18a	75	43.617

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021754	rab13	100	91.500	ENSAPOG00000001040	-	100	91.500	Acanthochromis_polyacanthus
ENSSFOG00015021754	rab13	100	67.164	ENSACIG00000003157	-	100	67.164	Amphilophus_citrinellus
ENSSFOG00015021754	rab13	100	91.500	ENSAOCG00000015908	-	100	91.500	Amphiprion_ocellaris
ENSSFOG00015021754	rab13	100	91.500	ENSAPEG00000004121	-	100	91.500	Amphiprion_percula
ENSSFOG00015021754	rab13	100	87.000	ENSATEG00000023662	-	100	87.000	Anabas_testudineus
ENSSFOG00015021754	rab13	100	90.000	ENSACLG00000019643	-	100	90.000	Astatotilapia_calliptera
ENSSFOG00015021754	rab13	100	87.500	ENSCVAG00000022649	-	100	87.500	Cyprinodon_variegatus
ENSSFOG00015021754	rab13	86	74.419	ENSDARG00000103934	megf8	99	74.419	Danio_rerio
ENSSFOG00015021754	rab13	100	86.000	ENSGAFG00000014787	-	100	86.000	Gambusia_affinis
ENSSFOG00015021754	rab13	100	90.000	ENSHBUG00000003728	-	100	90.000	Haplochromis_burtoni
ENSSFOG00015021754	rab13	100	90.000	ENSMZEG00005015817	-	100	90.000	Maylandia_zebra
ENSSFOG00015021754	rab13	100	88.500	ENSMMOG00000003924	-	100	88.500	Mola_mola
ENSSFOG00015021754	rab13	100	90.500	ENSMALG00000020807	-	100	90.500	Monopterus_albus
ENSSFOG00015021754	rab13	54	87.963	ENSOPRG00000014416	-	100	87.963	Ochotona_princeps
ENSSFOG00015021754	rab13	100	89.000	ENSORLG00000025395	-	100	89.000	Oryzias_latipes
ENSSFOG00015021754	rab13	100	88.500	ENSORLG00020009535	-	100	88.500	Oryzias_latipes_hni
ENSSFOG00015021754	rab13	100	88.500	ENSORLG00015015518	-	100	88.500	Oryzias_latipes_hsok
ENSSFOG00015021754	rab13	100	91.045	ENSPKIG00000014528	-	100	91.045	Paramormyrops_kingsleyae
ENSSFOG00015021754	rab13	100	87.500	ENSPFOG00000014418	-	100	87.500	Poecilia_formosa
ENSSFOG00015021754	rab13	100	87.500	ENSPLAG00000003181	-	100	87.500	Poecilia_latipinna
ENSSFOG00015021754	rab13	100	87.500	ENSPMEG00000008020	-	100	87.500	Poecilia_mexicana
ENSSFOG00015021754	rab13	100	87.500	ENSPMEG00000022988	-	100	87.500	Poecilia_mexicana
ENSSFOG00015021754	rab13	100	90.000	ENSPNYG00000004681	-	100	90.000	Pundamilia_nyererei
ENSSFOG00015021754	rab13	100	65.714	ENSSMAG00000002569	-	100	65.714	Scophthalmus_maximus
ENSSFOG00015021754	rab13	100	91.000	ENSSMAG00000016376	-	100	91.000	Scophthalmus_maximus
ENSSFOG00015021754	rab13	100	92.500	ENSSDUG00000006307	-	100	92.500	Seriola_dumerili
ENSSFOG00015021754	rab13	100	92.500	ENSSLDG00000015823	-	100	92.500	Seriola_lalandi_dorsalis
ENSSFOG00015021754	rab13	100	91.500	ENSSPAG00000022440	-	100	91.500	Stegastes_partitus
ENSSFOG00015021754	rab13	100	89.000	ENSTNIG00000018319	-	100	89.000	Tetraodon_nigroviridis
ENSSFOG00015021754	rab13	100	86.500	ENSXMAG00000016094	-	100	86.500	Xiphophorus_maculatus