EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSFOG00015021911 (Gene tree)
Gene ID: 108933795
Gene Symbol: srsf7b
Alias: 9G8|AAG3|HSSG1|RBM37|SFRS7|ZCCHC20|ZCRB2
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Plus strand
Length: 6948 bases
Position: chrKV411038.1:1273860-1280807
Accession: 108933795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015034389	RRM_1	PF00076.22	5.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015034767	-	1823	XM_018751125	ENSSFOP00015034389	252 (aa)	XP_018606641	A0A1W5A1L7

Gene Model

Click here to download ENSSFOG00015021911's gene model file

Pathways

Pathway ID	Pathway Name	Source
sfm03040	Spliceosome	KEGG
sfm05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSFOG00015021911	srsf7b	62	49.682	ENSSFOG00015022844	-	57	71.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021911	srsf7b	51	96.124	ENSG00000115875	SRSF7	98	96.124	Homo_sapiens
ENSSFOG00015021911	srsf7b	100	62.257	ENSANAG00000019399	SRSF7	88	95.833	Aotus_nancymaae
ENSSFOG00015021911	srsf7b	100	76.587	ENSAMXG00000007005	srsf7b	57	94.167	Astyanax_mexicanus
ENSSFOG00015021911	srsf7b	52	62.121	ENSCAFG00020013547	-	75	63.636	Canis_lupus_dingo
ENSSFOG00015021911	srsf7b	50	74.400	ENSCSEG00000006378	srsf7a	78	77.477	Cynoglossus_semilaevis
ENSSFOG00015021911	srsf7b	53	59.259	ENSCVAG00000009865	-	62	72.632	Cyprinodon_variegatus
ENSSFOG00015021911	srsf7b	69	65.803	ENSDARG00000035325	srsf7a	96	75.556	Danio_rerio
ENSSFOG00015021911	srsf7b	62	50.588	ENSEBUG00000002677	-	62	62.500	Eptatretus_burgeri
ENSSFOG00015021911	srsf7b	100	66.008	ENSEEUG00000014487	SRSF7	100	66.008	Erinaceus_europaeus
ENSSFOG00015021911	srsf7b	91	78.166	ENSELUG00000018155	srsf7b	86	87.500	Esox_lucius
ENSSFOG00015021911	srsf7b	50	75.200	ENSELUG00000016922	srsf7a	77	81.481	Esox_lucius
ENSSFOG00015021911	srsf7b	69	69.942	ENSFHEG00000023046	srsf7b	53	90.000	Fundulus_heteroclitus
ENSSFOG00015021911	srsf7b	50	84.375	ENSGAFG00000008856	srsf7b	79	90.000	Gambusia_affinis
ENSSFOG00015021911	srsf7b	78	82.143	ENSGAGG00000003553	SRSF7	88	95.833	Gopherus_agassizii
ENSSFOG00015021911	srsf7b	51	96.124	ENSIPUG00000011708	srsf7	73	96.124	Ictalurus_punctatus
ENSSFOG00015021911	srsf7b	62	59.873	ENSJJAG00000020230	-	72	68.595	Jaculus_jaculus
ENSSFOG00015021911	srsf7b	99	74.104	ENSLACG00000004052	SRSF7	50	94.958	Latimeria_chalumnae
ENSSFOG00015021911	srsf7b	73	67.568	ENSLACG00000018688	srsf7a	54	82.301	Latimeria_chalumnae
ENSSFOG00015021911	srsf7b	51	96.124	ENSLAFG00000005666	SRSF7	81	96.124	Loxodonta_africana
ENSSFOG00015021911	srsf7b	73	72.131	ENSMAMG00000017138	srsf7b	53	95.000	Mastacembelus_armatus
ENSSFOG00015021911	srsf7b	81	66.667	ENSMAUG00000021932	-	60	78.333	Mesocricetus_auratus
ENSSFOG00015021911	srsf7b	60	49.351	ENSMAUG00000011430	-	62	56.383	Mesocricetus_auratus
ENSSFOG00015021911	srsf7b	50	88.976	ENSMOCG00000022763	-	51	91.667	Microtus_ochrogaster
ENSSFOG00015021911	srsf7b	72	48.370	ENSORLG00015004309	srsf3b	58	69.072	Oryzias_latipes_hsok
ENSSFOG00015021911	srsf7b	51	95.312	ENSOARG00000008771	SRSF7	50	95.833	Ovis_aries
ENSSFOG00015021911	srsf7b	70	87.500	ENSPKIG00000017425	srsf7b	78	94.203	Paramormyrops_kingsleyae
ENSSFOG00015021911	srsf7b	51	71.094	ENSPMGG00000021890	srsf7a	80	76.577	Periophthalmus_magnuspinnatus
ENSSFOG00015021911	srsf7b	53	57.895	ENSPNAG00000010438	srsf3b	59	71.579	Pygocentrus_nattereri
ENSSFOG00015021911	srsf7b	74	66.667	ENSRNOG00000008398	AABR07055789.1	72	83.333	Rattus_norvegicus
ENSSFOG00015021911	srsf7b	72	77.901	ENSSDUG00000021338	srsf7b	84	95.000	Seriola_dumerili
ENSSFOG00015021911	srsf7b	69	77.143	ENSSLDG00000021463	srsf7b	68	95.000	Seriola_lalandi_dorsalis
ENSSFOG00015021911	srsf7b	59	58.278	ENSVVUG00000006092	-	69	72.222	Vulpes_vulpes
ENSSFOG00015021911	srsf7b	50	89.600	ENSXCOG00000010843	srsf7b	82	90.000	Xiphophorus_couchianus