EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSFOG00015021978 (Gene tree)
Gene ID: 108934325
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Scleropages_formosus
Status: putative
Strand: Minus strand
Length: 14380 bases
Position: chrKV411071.1:2919930-2934309
Accession: 108934325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSFOP00015034495	KH_1	PF00013.29	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSFOT00015034873	-	4220	XM_018751946	ENSSFOP00015034495	684 (aa)	XP_018607462	A0A1W5A375

Gene Model

Click here to download ENSSFOG00015021978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSFOG00015021978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSFOG00015021978	sf1	69	80.331	ENSAPOG00000012341	sf1	71	80.619	Acanthochromis_polyacanthus
ENSSFOG00015021978	sf1	66	77.925	ENSACIG00000016514	sf1	70	76.667	Amphilophus_citrinellus
ENSSFOG00015021978	sf1	69	80.705	ENSAOCG00000010934	sf1	71	80.825	Amphiprion_ocellaris
ENSSFOG00015021978	sf1	69	80.705	ENSAPEG00000009498	sf1	71	80.825	Amphiprion_percula
ENSSFOG00015021978	sf1	66	80.349	ENSATEG00000001894	sf1	71	80.873	Anabas_testudineus
ENSSFOG00015021978	sf1	58	77.751	ENSANAG00000026664	-	93	80.451	Aotus_nancymaae
ENSSFOG00015021978	sf1	85	63.742	ENSANAG00000022607	-	89	72.995	Aotus_nancymaae
ENSSFOG00015021978	sf1	68	83.298	ENSAMXG00000003630	sf1	62	83.579	Astyanax_mexicanus
ENSSFOG00015021978	sf1	55	76.329	ENSBTAG00000001035	SF1	95	64.812	Bos_taurus
ENSSFOG00015021978	sf1	55	77.053	ENSCJAG00000002780	SF1	79	67.910	Callithrix_jacchus
ENSSFOG00015021978	sf1	55	76.812	ENSCAFG00000014239	SF1	62	80.299	Canis_familiaris
ENSSFOG00015021978	sf1	55	76.812	ENSCAFG00020014381	SF1	62	80.549	Canis_lupus_dingo
ENSSFOG00015021978	sf1	55	77.053	ENSCHIG00000025867	SF1	72	80.451	Capra_hircus
ENSSFOG00015021978	sf1	55	75.598	ENSCAPG00000010762	SF1	70	80.653	Cavia_aperea
ENSSFOG00015021978	sf1	55	75.837	ENSCPOG00000012290	SF1	73	80.500	Cavia_porcellus
ENSSFOG00015021978	sf1	56	71.939	ENSCCAG00000023781	-	86	69.388	Cebus_capucinus
ENSSFOG00015021978	sf1	85	68.498	ENSCCAG00000037881	SF1	93	80.451	Cebus_capucinus
ENSSFOG00015021978	sf1	58	77.859	ENSCATG00000011564	SF1	91	81.137	Cercocebus_atys
ENSSFOG00015021978	sf1	55	77.053	ENSCSAG00000007258	SF1	72	80.451	Chlorocebus_sabaeus
ENSSFOG00015021978	sf1	52	71.899	ENSCHOG00000006008	SF1	71	75.131	Choloepus_hoffmanni
ENSSFOG00015021978	sf1	61	83.294	ENSCPBG00000023763	SF1	53	83.212	Chrysemys_picta_bellii
ENSSFOG00015021978	sf1	59	56.867	ENSCING00000005564	-	86	57.243	Ciona_intestinalis
ENSSFOG00015021978	sf1	64	49.321	ENSCSAVG00000009055	-	60	67.857	Ciona_savignyi
ENSSFOG00015021978	sf1	58	77.184	ENSCANG00000042201	SF1	88	82.888	Colobus_angolensis_palliatus
ENSSFOG00015021978	sf1	55	77.482	ENSCGRG00001003677	Sf1	69	80.702	Cricetulus_griseus_chok1gshd
ENSSFOG00015021978	sf1	55	77.482	ENSCGRG00000001708	Sf1	72	80.750	Cricetulus_griseus_crigri
ENSSFOG00015021978	sf1	70	78.351	ENSCSEG00000014375	sf1	68	79.002	Cynoglossus_semilaevis
ENSSFOG00015021978	sf1	66	81.441	ENSCVAG00000001670	sf1	70	79.794	Cyprinodon_variegatus
ENSSFOG00015021978	sf1	68	83.512	ENSDARG00000008188	sf1	68	90.722	Danio_rerio
ENSSFOG00015021978	sf1	55	77.053	ENSDNOG00000001282	SF1	72	80.702	Dasypus_novemcinctus
ENSSFOG00015021978	sf1	55	76.812	ENSDORG00000016334	Sf1	62	80.549	Dipodomys_ordii
ENSSFOG00015021978	sf1	55	71.535	ENSETEG00000012830	SF1	55	73.028	Echinops_telfairi
ENSSFOG00015021978	sf1	100	47.754	ENSEBUG00000012728	sf1	60	57.753	Eptatretus_burgeri
ENSSFOG00015021978	sf1	55	76.570	ENSEASG00005018272	SF1	72	79.950	Equus_asinus_asinus
ENSSFOG00015021978	sf1	55	76.812	ENSECAG00000024544	SF1	72	80.050	Equus_caballus
ENSSFOG00015021978	sf1	69	79.141	ENSELUG00000013225	sf1	64	80.777	Esox_lucius
ENSSFOG00015021978	sf1	55	77.053	ENSFCAG00000012231	SF1	79	68.668	Felis_catus
ENSSFOG00015021978	sf1	55	77.240	ENSFDAG00000009833	SF1	70	80.653	Fukomys_damarensis
ENSSFOG00015021978	sf1	66	81.400	ENSFHEG00000022656	sf1	71	79.503	Fundulus_heteroclitus
ENSSFOG00015021978	sf1	69	80.462	ENSGAFG00000019284	sf1	78	79.917	Gambusia_affinis
ENSSFOG00015021978	sf1	61	83.059	ENSGAGG00000021691	SF1	71	72.441	Gopherus_agassizii
ENSSFOG00015021978	sf1	66	82.018	ENSHBUG00000011598	sf1	71	80.493	Haplochromis_burtoni
ENSSFOG00015021978	sf1	55	76.812	ENSHGLG00000009541	SF1	69	80.451	Heterocephalus_glaber_female
ENSSFOG00015021978	sf1	55	76.998	ENSHGLG00100013879	-	70	80.653	Heterocephalus_glaber_male
ENSSFOG00015021978	sf1	60	68.315	ENSHGLG00100008255	-	80	69.880	Heterocephalus_glaber_male
ENSSFOG00015021978	sf1	68	80.169	ENSHCOG00000011388	sf1	97	76.029	Hippocampus_comes
ENSSFOG00015021978	sf1	53	72.581	ENSSTOG00000024353	-	73	70.270	Ictidomys_tridecemlineatus
ENSSFOG00015021978	sf1	55	77.240	ENSSTOG00000009790	-	63	80.750	Ictidomys_tridecemlineatus
ENSSFOG00015021978	sf1	55	77.053	ENSJJAG00000011788	Sf1	62	80.798	Jaculus_jaculus
ENSSFOG00015021978	sf1	68	78.858	ENSKMAG00000005854	sf1	73	79.834	Kryptolebias_marmoratus
ENSSFOG00015021978	sf1	82	79.828	ENSLBEG00000019836	sf1	76	79.261	Labrus_bergylta
ENSSFOG00015021978	sf1	66	84.086	ENSLOCG00000002130	sf1	76	84.536	Lepisosteus_oculatus
ENSSFOG00015021978	sf1	55	75.656	ENSLAFG00000007201	SF1	67	81.546	Loxodonta_africana
ENSSFOG00015021978	sf1	58	77.859	ENSMFAG00000033122	SF1	91	81.137	Macaca_fascicularis
ENSSFOG00015021978	sf1	58	78.571	ENSMMUG00000022606	SF1	96	80.451	Macaca_mulatta
ENSSFOG00015021978	sf1	58	77.859	ENSMNEG00000037901	SF1	91	81.137	Macaca_nemestrina
ENSSFOG00015021978	sf1	58	78.049	ENSMLEG00000040706	SF1	91	81.347	Mandrillus_leucophaeus
ENSSFOG00015021978	sf1	66	81.838	ENSMAMG00000001780	sf1	71	80.873	Mastacembelus_armatus
ENSSFOG00015021978	sf1	66	82.018	ENSMZEG00005009196	sf1	71	80.493	Maylandia_zebra
ENSSFOG00015021978	sf1	55	77.295	ENSMAUG00000014064	Sf1	69	80.702	Mesocricetus_auratus
ENSSFOG00015021978	sf1	58	77.670	ENSMICG00000001202	SF1	93	80.250	Microcebus_murinus
ENSSFOG00015021978	sf1	55	76.812	ENSMOCG00000022038	Sf1	69	80.549	Microtus_ochrogaster
ENSSFOG00015021978	sf1	66	78.414	ENSMMOG00000020474	sf1	70	78.033	Mola_mola
ENSSFOG00015021978	sf1	58	76.850	ENSMODG00000029407	SF1	86	80.952	Monodelphis_domestica
ENSSFOG00015021978	sf1	66	77.042	ENSMALG00000020521	sf1	77	76.778	Monopterus_albus
ENSSFOG00015021978	sf1	55	77.295	MGP_CAROLIEiJ_G0022607	Sf1	99	93.985	Mus_caroli
ENSSFOG00015021978	sf1	55	77.295	ENSMUSG00000024949	Sf1	99	93.985	Mus_musculus
ENSSFOG00015021978	sf1	55	77.295	MGP_PahariEiJ_G0014101	Sf1	99	93.985	Mus_pahari
ENSSFOG00015021978	sf1	55	77.295	MGP_SPRETEiJ_G0023518	Sf1	99	93.985	Mus_spretus
ENSSFOG00015021978	sf1	55	77.053	ENSMPUG00000012684	SF1	62	80.549	Mustela_putorius_furo
ENSSFOG00015021978	sf1	62	73.826	ENSMLUG00000029800	-	68	77.250	Myotis_lucifugus
ENSSFOG00015021978	sf1	55	76.329	ENSMLUG00000015217	-	62	81.000	Myotis_lucifugus
ENSSFOG00015021978	sf1	55	77.053	ENSNGAG00000005550	Sf1	69	80.702	Nannospalax_galili
ENSSFOG00015021978	sf1	66	81.637	ENSNBRG00000017606	sf1	72	80.376	Neolamprologus_brichardi
ENSSFOG00015021978	sf1	58	77.184	ENSNLEG00000005236	-	88	82.888	Nomascus_leucogenys
ENSSFOG00015021978	sf1	57	78.713	ENSMEUG00000013424	SF1	73	81.378	Notamacropus_eugenii
ENSSFOG00015021978	sf1	66	81.798	ENSONIG00000015728	sf1	71	80.287	Oreochromis_niloticus
ENSSFOG00015021978	sf1	50	74.515	ENSOANG00000002909	SF1	81	76.577	Ornithorhynchus_anatinus
ENSSFOG00015021978	sf1	55	75.418	ENSOCUG00000026486	SF1	63	80.299	Oryctolagus_cuniculus
ENSSFOG00015021978	sf1	68	79.493	ENSORLG00000011853	sf1	69	79.210	Oryzias_latipes
ENSSFOG00015021978	sf1	68	79.406	ENSORLG00020011834	sf1	69	79.123	Oryzias_latipes_hni
ENSSFOG00015021978	sf1	66	79.610	ENSORLG00015012855	sf1	69	78.794	Oryzias_latipes_hsok
ENSSFOG00015021978	sf1	68	80.255	ENSOMEG00000005210	sf1	70	80.376	Oryzias_melastigma
ENSSFOG00015021978	sf1	55	76.812	ENSOGAG00000016196	SF1	62	80.299	Otolemur_garnettii
ENSSFOG00015021978	sf1	55	77.053	ENSOARG00000009166	SF1	69	80.299	Ovis_aries
ENSSFOG00015021978	sf1	58	78.240	ENSPPAG00000002799	-	94	80.451	Pan_paniscus
ENSSFOG00015021978	sf1	55	77.053	ENSPPRG00000013566	SF1	62	81.510	Panthera_pardus
ENSSFOG00015021978	sf1	55	76.812	ENSPTIG00000016141	SF1	71	80.451	Panthera_tigris_altaica
ENSSFOG00015021978	sf1	59	78.147	ENSPTRG00000003846	SF1	92	80.451	Pan_troglodytes
ENSSFOG00015021978	sf1	58	77.859	ENSPANG00000020754	SF1	91	81.137	Papio_anubis
ENSSFOG00015021978	sf1	55	77.053	ENSPEMG00000010463	Sf1	69	80.702	Peromyscus_maniculatus_bairdii
ENSSFOG00015021978	sf1	58	77.913	ENSPCIG00000018173	SF1	95	71.215	Phascolarctos_cinereus
ENSSFOG00015021978	sf1	66	82.018	ENSPFOG00000013683	sf1	71	80.538	Poecilia_formosa
ENSSFOG00015021978	sf1	61	83.175	ENSPLAG00000018076	sf1	64	82.517	Poecilia_latipinna
ENSSFOG00015021978	sf1	66	82.018	ENSPMEG00000005726	sf1	71	80.538	Poecilia_mexicana
ENSSFOG00015021978	sf1	66	81.798	ENSPREG00000004155	sf1	71	80.290	Poecilia_reticulata
ENSSFOG00015021978	sf1	55	77.053	ENSPPYG00000003098	-	74	80.299	Pongo_abelii
ENSSFOG00015021978	sf1	56	75.236	ENSPCAG00000013631	SF1	79	67.790	Procavia_capensis
ENSSFOG00015021978	sf1	58	77.670	ENSPCOG00000027546	SF1	93	80.250	Propithecus_coquereli
ENSSFOG00015021978	sf1	56	76.905	ENSPVAG00000016938	SF1	78	69.582	Pteropus_vampyrus
ENSSFOG00015021978	sf1	66	80.435	ENSPNYG00000004673	sf1	71	80.493	Pundamilia_nyererei
ENSSFOG00015021978	sf1	68	83.940	ENSPNAG00000013072	sf1	70	84.211	Pygocentrus_nattereri
ENSSFOG00015021978	sf1	55	77.295	ENSRNOG00000021085	Sf1	65	79.580	Rattus_norvegicus
ENSSFOG00015021978	sf1	53	82.796	ENSRBIG00000042818	SF1	89	82.058	Rhinopithecus_bieti
ENSSFOG00015021978	sf1	58	77.372	ENSRROG00000045655	SF1	89	83.110	Rhinopithecus_roxellana
ENSSFOG00015021978	sf1	85	62.273	ENSSBOG00000022267	-	94	66.667	Saimiri_boliviensis_boliviensis
ENSSFOG00015021978	sf1	57	82.952	ENSSHAG00000006841	SF1	73	83.797	Sarcophilus_harrisii
ENSSFOG00015021978	sf1	84	76.520	ENSSMAG00000007549	sf1	75	78.004	Scophthalmus_maximus
ENSSFOG00015021978	sf1	66	80.346	ENSSDUG00000003903	sf1	73	81.328	Seriola_dumerili
ENSSFOG00015021978	sf1	66	80.525	ENSSLDG00000013075	sf1	71	80.873	Seriola_lalandi_dorsalis
ENSSFOG00015021978	sf1	55	72.881	ENSSARG00000008180	SF1	76	76.000	Sorex_araneus
ENSSFOG00015021978	sf1	58	80.471	ENSSPUG00000012907	SF1	65	84.021	Sphenodon_punctatus
ENSSFOG00015021978	sf1	69	80.913	ENSSPAG00000019060	sf1	71	81.031	Stegastes_partitus
ENSSFOG00015021978	sf1	55	77.053	ENSSSCG00000013021	SF1	72	80.750	Sus_scrofa
ENSSFOG00015021978	sf1	72	67.433	ENSTNIG00000004820	sf1	76	71.744	Tetraodon_nigroviridis
ENSSFOG00015021978	sf1	53	75.815	ENSTBEG00000013133	SF1	71	74.495	Tupaia_belangeri
ENSSFOG00015021978	sf1	55	71.429	ENSTTRG00000008857	SF1	73	75.377	Tursiops_truncatus
ENSSFOG00015021978	sf1	55	78.155	ENSUMAG00000007268	SF1	97	63.851	Ursus_maritimus
ENSSFOG00015021978	sf1	55	77.053	ENSVVUG00000028585	SF1	72	80.451	Vulpes_vulpes
ENSSFOG00015021978	sf1	85	71.966	ENSXETG00000008434	sf1	66	83.505	Xenopus_tropicalis
ENSSFOG00015021978	sf1	52	87.535	ENSXCOG00000003704	sf1	73	85.455	Xiphophorus_couchianus
ENSSFOG00015021978	sf1	66	82.135	ENSXMAG00000007822	sf1	73	80.625	Xiphophorus_maculatus